Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 Gm22418-201ENSMUST00000180326 107 ntBASIC4.94□□□□□ -1.62
RaraP11416 Gm27457-201ENSMUST00000184771 156 ntBASIC4.94□□□□□ -1.62
RaraP11416 Gm27608-201ENSMUST00000184822 162 ntBASIC4.94□□□□□ -1.62
RaraP11416 Gm32391-201ENSMUST00000191839 540 ntTSL 2 BASIC4.94□□□□□ -1.62
RaraP11416 Gm43614-201ENSMUST00000197030 517 ntTSL 2 BASIC4.94□□□□□ -1.62
RaraP11416 Gm19243-201ENSMUST00000198592 269 ntBASIC4.94□□□□□ -1.62
RaraP11416 Gm43284-201ENSMUST00000200103 253 ntBASIC4.94□□□□□ -1.62
RaraP11416 Gm11213-202ENSMUST00000210529 524 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
RaraP11416 Gm17779-201ENSMUST00000213395 394 ntBASIC4.94□□□□□ -1.62
RaraP11416 Gm35552-201ENSMUST00000214355 396 ntTSL 5 BASIC4.94□□□□□ -1.62
RaraP11416 AC166902.1-201ENSMUST00000216653 517 ntBASIC4.94□□□□□ -1.62
RaraP11416 CT009718.1-201ENSMUST00000220784 395 ntTSL 2 BASIC4.94□□□□□ -1.62
RaraP11416 Gm3338-201ENSMUST00000220982 269 ntBASIC4.94□□□□□ -1.62
RaraP11416 Gm23629-201ENSMUST00000082465 107 ntBASIC4.94□□□□□ -1.62
RaraP11416 Gm23924-201ENSMUST00000082474 108 ntBASIC4.94□□□□□ -1.62
RaraP11416 Gm22246-201ENSMUST00000082478 107 ntBASIC4.94□□□□□ -1.62
RaraP11416 Gm22747-201ENSMUST00000082495 107 ntBASIC4.94□□□□□ -1.62
RaraP11416 Gm23296-201ENSMUST00000082555 107 ntBASIC4.94□□□□□ -1.62
RaraP11416 Gm22063-201ENSMUST00000082560 107 ntBASIC4.94□□□□□ -1.62
RaraP11416 Gm26129-201ENSMUST00000082719 107 ntBASIC4.94□□□□□ -1.62
RaraP11416 Gm24859-201ENSMUST00000082729 107 ntBASIC4.94□□□□□ -1.62
RaraP11416 Gm23057-201ENSMUST00000082801 107 ntBASIC4.94□□□□□ -1.62
RaraP11416 Gm26328-201ENSMUST00000082821 107 ntBASIC4.94□□□□□ -1.62
RaraP11416 Gm26331-201ENSMUST00000082824 107 ntBASIC4.94□□□□□ -1.62
RaraP11416 Gm24205-201ENSMUST00000082953 107 ntBASIC4.94□□□□□ -1.62
RaraP11416 Gm25405-201ENSMUST00000082973 107 ntBASIC4.94□□□□□ -1.62
RaraP11416 Gm22628-201ENSMUST00000082988 107 ntBASIC4.94□□□□□ -1.62
RaraP11416 Gm26324-201ENSMUST00000083073 107 ntBASIC4.94□□□□□ -1.62
RaraP11416 Gm26496-201ENSMUST00000083150 107 ntBASIC4.94□□□□□ -1.62
RaraP11416 Gm23677-201ENSMUST00000083156 104 ntBASIC4.94□□□□□ -1.62
RaraP11416 Gm26127-201ENSMUST00000083193 107 ntBASIC4.94□□□□□ -1.62
RaraP11416 Gm24456-201ENSMUST00000083198 107 ntBASIC4.94□□□□□ -1.62
RaraP11416 Gm24458-201ENSMUST00000083204 107 ntBASIC4.94□□□□□ -1.62
RaraP11416 Gm24018-201ENSMUST00000083232 107 ntBASIC4.94□□□□□ -1.62
RaraP11416 Gm25794-201ENSMUST00000083286 107 ntBASIC4.94□□□□□ -1.62
RaraP11416 Gm25790-201ENSMUST00000083293 107 ntBASIC4.94□□□□□ -1.62
RaraP11416 Gm22295-201ENSMUST00000083311 107 ntBASIC4.94□□□□□ -1.62
RaraP11416 Gm25127-201ENSMUST00000083336 107 ntBASIC4.94□□□□□ -1.62
RaraP11416 Gm25583-201ENSMUST00000083413 107 ntBASIC4.94□□□□□ -1.62
RaraP11416 Gm25577-201ENSMUST00000083414 107 ntBASIC4.94□□□□□ -1.62
RaraP11416 Gm24414-201ENSMUST00000083434 107 ntBASIC4.94□□□□□ -1.62
RaraP11416 Gm24861-201ENSMUST00000083459 107 ntBASIC4.94□□□□□ -1.62
RaraP11416 Gm24803-201ENSMUST00000083693 107 ntBASIC4.94□□□□□ -1.62
RaraP11416 Gm23103-201ENSMUST00000083725 107 ntBASIC4.94□□□□□ -1.62
RaraP11416 Gm22580-201ENSMUST00000083727 107 ntBASIC4.94□□□□□ -1.62
RaraP11416 Gm24260-201ENSMUST00000083741 107 ntBASIC4.94□□□□□ -1.62
RaraP11416 Gm23732-201ENSMUST00000083751 107 ntBASIC4.94□□□□□ -1.62
RaraP11416 Gm22682-201ENSMUST00000083854 107 ntBASIC4.94□□□□□ -1.62
RaraP11416 Gm25869-201ENSMUST00000083855 107 ntBASIC4.94□□□□□ -1.62
RaraP11416 Gm24693-201ENSMUST00000083885 107 ntBASIC4.94□□□□□ -1.62
RaraP11416 Gm26317-201ENSMUST00000083894 107 ntBASIC4.94□□□□□ -1.62
RaraP11416 Gm24448-201ENSMUST00000083979 107 ntBASIC4.94□□□□□ -1.62
RaraP11416 Gm22798-201ENSMUST00000083992 107 ntBASIC4.94□□□□□ -1.62
RaraP11416 Gm26427-201ENSMUST00000093648 107 ntBASIC4.94□□□□□ -1.62
RaraP11416 Gm22886-201ENSMUST00000093714 107 ntBASIC4.94□□□□□ -1.62
RaraP11416 Gm22170-201ENSMUST00000097247 107 ntBASIC4.94□□□□□ -1.62
RaraP11416 Zfp738-203ENSMUST00000137496 13215 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
RaraP11416 Gm15773-201ENSMUST00000118665 1448 ntBASIC4.94□□□□□ -1.62
RaraP11416 Gm29325-201ENSMUST00000190705 2528 ntBASIC4.94□□□□□ -1.62
RaraP11416 Olfr811-202ENSMUST00000215058 2508 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
RaraP11416 Gm42986-201ENSMUST00000201618 3385 ntBASIC4.94□□□□□ -1.62
RaraP11416 Olfr741-202ENSMUST00000205518 3406 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
RaraP11416 Olfr1366-202ENSMUST00000175637 3045 ntAPPRIS ALT2 TSL 3 BASIC4.94□□□□□ -1.62
RaraP11416 Olfr1191-ps1-202ENSMUST00000217379 5933 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
RaraP11416 Gm15638-201ENSMUST00000128159 2062 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
RaraP11416 Gm24951-201ENSMUST00000102182 109 ntBASIC4.93□□□□□ -1.62
RaraP11416 n-R5s52-201ENSMUST00000104614 113 ntBASIC4.93□□□□□ -1.62
RaraP11416 Gm14838-201ENSMUST00000118913 248 ntBASIC4.93□□□□□ -1.62
RaraP11416 Gm12640-201ENSMUST00000120097 310 ntBASIC4.93□□□□□ -1.62
RaraP11416 Gm14768-201ENSMUST00000122126 678 ntBASIC4.93□□□□□ -1.62
RaraP11416 Gm16351-201ENSMUST00000142008 250 ntTSL 3 BASIC4.93□□□□□ -1.62
RaraP11416 Gm16084-201ENSMUST00000148122 620 ntTSL 3 BASIC4.93□□□□□ -1.62
RaraP11416 Gm15414-201ENSMUST00000155217 440 ntTSL 3 BASIC4.93□□□□□ -1.62
RaraP11416 4930505K14Rik-201ENSMUST00000155504 515 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
RaraP11416 4930556I23Rik-201ENSMUST00000160659 560 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
RaraP11416 Gm17103-201ENSMUST00000168897 549 ntTSL 3 BASIC4.93□□□□□ -1.62
RaraP11416 Gm20619-201ENSMUST00000175814 2008 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
RaraP11416 Vmn2r-ps34-201ENSMUST00000177433 904 ntBASIC4.93□□□□□ -1.62
RaraP11416 Mir195b-201ENSMUST00000184814 97 ntBASIC4.93□□□□□ -1.62
RaraP11416 Gm20257-202ENSMUST00000188643 130 ntBASIC4.93□□□□□ -1.62
RaraP11416 Olfr1223-201ENSMUST00000217342 2333 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
RaraP11416 AC123064.2-201ENSMUST00000217758 193 ntBASIC4.93□□□□□ -1.62
RaraP11416 Gm33680-201ENSMUST00000219336 576 ntTSL 5 BASIC4.93□□□□□ -1.62
RaraP11416 AC153864.2-201ENSMUST00000220424 292 ntBASIC4.93□□□□□ -1.62
RaraP11416 AC211878.2-201ENSMUST00000222486 488 ntBASIC4.93□□□□□ -1.62
RaraP11416 Vmn2r89-202ENSMUST00000159734 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
RaraP11416 Gm42946-201ENSMUST00000196108 2570 ntBASIC4.93□□□□□ -1.62
RaraP11416 Akap6-201ENSMUST00000095737 14847 ntAPPRIS P2 TSL 1 (best) BASIC4.93□□□□□ -1.62
RaraP11416 Olfr211-202ENSMUST00000203700 4880 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
RaraP11416 Fbxl17-204ENSMUST00000112840 3667 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
RaraP11416 Prrc2c-210ENSMUST00000182660 11502 ntAPPRIS P2 TSL 5 BASIC4.92□□□□□ -1.62
RaraP11416 Olfr920-201ENSMUST00000074740 5711 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
RaraP11416 Psg25-201ENSMUST00000094795 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
RaraP11416 Mir701-201ENSMUST00000102208 109 ntBASIC4.92□□□□□ -1.62
RaraP11416 Igkv8-16-201ENSMUST00000103392 362 ntAPPRIS ALT2 BASIC4.92□□□□□ -1.62
RaraP11416 Gm22272-201ENSMUST00000104039 134 ntBASIC4.92□□□□□ -1.62
RaraP11416 Gm11894-201ENSMUST00000121579 328 ntBASIC4.92□□□□□ -1.62
RaraP11416 Gm14500-201ENSMUST00000121647 113 ntBASIC4.92□□□□□ -1.62
RaraP11416 Gm12685-201ENSMUST00000121702 214 ntBASIC4.92□□□□□ -1.62
RaraP11416 Gm23327-201ENSMUST00000157420 78 ntBASIC4.92□□□□□ -1.62
Retrieved 100 of 76,532 protein–RNA pairs in 80.9 ms