Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Gm14440-201ENSMUST00000098998 192 ntTSL 5 BASIC3.21□□□□□ -1.9
Lire1P11260 Gm34549-201ENSMUST00000207057 1611 ntTSL 5 BASIC3.21□□□□□ -1.9
Lire1P11260 Olfr609-202ENSMUST00000216075 3429 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Lire1P11260 Vmn1r185-202ENSMUST00000226694 5656 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Lire1P11260 Stap1-206ENSMUST00000198435 3350 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
Lire1P11260 Gm37158-201ENSMUST00000191652 5704 ntBASIC3.2□□□□□ -1.9
Lire1P11260 Gm37494-202ENSMUST00000188038 16021 ntTSL 5 BASIC3.2□□□□□ -1.9
Lire1P11260 Gm11869-201ENSMUST00000118701 329 ntBASIC3.2□□□□□ -1.9
Lire1P11260 Gm14736-201ENSMUST00000121470 336 ntBASIC3.2□□□□□ -1.9
Lire1P11260 Pfdn4-205ENSMUST00000136839 452 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Lire1P11260 Gm22186-201ENSMUST00000157822 122 ntBASIC3.2□□□□□ -1.9
Lire1P11260 Gm23257-201ENSMUST00000158322 132 ntBASIC3.2□□□□□ -1.9
Lire1P11260 Gm3486-201ENSMUST00000169361 883 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Lire1P11260 Gm26141-201ENSMUST00000175299 126 ntBASIC3.2□□□□□ -1.9
Lire1P11260 Gm27903-201ENSMUST00000175482 126 ntBASIC3.2□□□□□ -1.9
Lire1P11260 Gm22131-201ENSMUST00000178415 94 ntBASIC3.2□□□□□ -1.9
Lire1P11260 Gm24100-201ENSMUST00000178592 79 ntBASIC3.2□□□□□ -1.9
Lire1P11260 Gm8897-202ENSMUST00000179679 465 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
Lire1P11260 Gm30341-201ENSMUST00000194363 289 ntBASIC3.2□□□□□ -1.9
Lire1P11260 Gm6135-201ENSMUST00000198726 372 ntTSL 2 BASIC3.2□□□□□ -1.9
Lire1P11260 2900064F13Rik-201ENSMUST00000202166 1008 ntBASIC3.2□□□□□ -1.9
Lire1P11260 E330011O21Rik-203ENSMUST00000210555 455 ntTSL 5 BASIC3.2□□□□□ -1.9
Lire1P11260 AC115047.1-201ENSMUST00000213795 322 ntBASIC3.2□□□□□ -1.9
Lire1P11260 AC174457.1-201ENSMUST00000215932 226 ntBASIC3.2□□□□□ -1.9
Lire1P11260 Olfr946-ps1-201ENSMUST00000217547 341 ntBASIC3.2□□□□□ -1.9
Lire1P11260 5430401H09Rik-201ENSMUST00000218145 1076 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Lire1P11260 D830005E20Rik-202ENSMUST00000219691 971 ntTSL 5 BASIC3.2□□□□□ -1.9
Lire1P11260 AC159242.1-201ENSMUST00000225832 194 ntBASIC3.2□□□□□ -1.9
Lire1P11260 1700111E14Rik-201ENSMUST00000031863 908 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Lire1P11260 n-R5s79-201ENSMUST00000083071 120 ntBASIC3.2□□□□□ -1.9
Lire1P11260 Gm25755-201ENSMUST00000083396 107 ntBASIC3.2□□□□□ -1.9
Lire1P11260 Gm23096-201ENSMUST00000083447 107 ntBASIC3.2□□□□□ -1.9
Lire1P11260 Gm23733-201ENSMUST00000083750 106 ntBASIC3.2□□□□□ -1.9
Lire1P11260 Gm16261-201ENSMUST00000096813 205 ntBASIC3.2□□□□□ -1.9
Lire1P11260 Vmn1r69-201ENSMUST00000163658 2558 ntAPPRIS P2 BASIC3.2□□□□□ -1.9
Lire1P11260 Wnk3-201ENSMUST00000096285 8551 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
Lire1P11260 Gm15026-201ENSMUST00000119219 458 ntBASIC3.19□□□□□ -1.9
Lire1P11260 Gm15061-201ENSMUST00000121076 1046 ntBASIC3.19□□□□□ -1.9
Lire1P11260 4930401O12Rik-201ENSMUST00000153175 841 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Lire1P11260 Gm23602-201ENSMUST00000157258 132 ntBASIC3.19□□□□□ -1.9
Lire1P11260 Gm23034-201ENSMUST00000158001 147 ntBASIC3.19□□□□□ -1.9
Lire1P11260 Gm25519-201ENSMUST00000158392 127 ntBASIC3.19□□□□□ -1.9
Lire1P11260 Gm28010-201ENSMUST00000179485 126 ntBASIC3.19□□□□□ -1.9
Lire1P11260 Gm28591-201ENSMUST00000185259 183 ntBASIC3.19□□□□□ -1.9
Lire1P11260 1700063O14Rik-201ENSMUST00000187067 492 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Lire1P11260 Gm29184-201ENSMUST00000190038 334 ntBASIC3.19□□□□□ -1.9
Lire1P11260 Gm37565-201ENSMUST00000192277 491 ntTSL 3 BASIC3.19□□□□□ -1.9
Lire1P11260 Gm43600-201ENSMUST00000202134 223 ntBASIC3.19□□□□□ -1.9
Lire1P11260 Gm36816-202ENSMUST00000205197 504 ntTSL 5 BASIC3.19□□□□□ -1.9
Lire1P11260 Gm45173-201ENSMUST00000206819 305 ntBASIC3.19□□□□□ -1.9
Lire1P11260 Olfr1468-ps1-201ENSMUST00000207287 1208 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Lire1P11260 AL669916.3-201ENSMUST00000213855 94 ntBASIC3.19□□□□□ -1.9
Lire1P11260 AL669916.6-201ENSMUST00000214610 94 ntBASIC3.19□□□□□ -1.9
Lire1P11260 AL669916.4-201ENSMUST00000215976 94 ntBASIC3.19□□□□□ -1.9
Lire1P11260 AL669916.1-201ENSMUST00000217640 94 ntBASIC3.19□□□□□ -1.9
Lire1P11260 Gm35558-202ENSMUST00000221819 499 ntBASIC3.19□□□□□ -1.9
Lire1P11260 AC158392.2-201ENSMUST00000225402 969 ntBASIC3.19□□□□□ -1.9
Lire1P11260 Olfr103-201ENSMUST00000058826 942 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Lire1P11260 Olfr805-201ENSMUST00000078876 960 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Lire1P11260 Gm26055-201ENSMUST00000083038 107 ntBASIC3.19□□□□□ -1.9
Lire1P11260 Mir350-201ENSMUST00000083639 99 ntBASIC3.19□□□□□ -1.9
Lire1P11260 Zfp945-205ENSMUST00000160457 6497 ntAPPRIS P4 TSL 1 (best) BASIC3.19□□□□□ -1.9
Lire1P11260 Omd-201ENSMUST00000065494 1556 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Lire1P11260 Vmn1r28-201ENSMUST00000226813 10877 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Lire1P11260 Gm28359-201ENSMUST00000187470 1322 ntBASIC3.19□□□□□ -1.9
Lire1P11260 Muc16-204ENSMUST00000208663 25437 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Lire1P11260 Gm42659-201ENSMUST00000196955 1754 ntBASIC3.18□□□□□ -1.9
Lire1P11260 Mir883a-201ENSMUST00000104824 76 ntBASIC3.18□□□□□ -1.9
Lire1P11260 Gm6664-201ENSMUST00000119138 468 ntBASIC3.18□□□□□ -1.9
Lire1P11260 Gm12607-201ENSMUST00000120724 493 ntBASIC3.18□□□□□ -1.9
Lire1P11260 Uqcrh-ps2-201ENSMUST00000121613 269 ntBASIC3.18□□□□□ -1.9
Lire1P11260 Gm22956-201ENSMUST00000122520 80 ntBASIC3.18□□□□□ -1.9
Lire1P11260 Mir5099-201ENSMUST00000175257 74 ntBASIC3.18□□□□□ -1.9
Lire1P11260 Gm8247-202ENSMUST00000178759 375 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
Lire1P11260 Gm29516-201ENSMUST00000190402 468 ntBASIC3.18□□□□□ -1.9
Lire1P11260 Gm18341-201ENSMUST00000197538 622 ntBASIC3.18□□□□□ -1.9
Lire1P11260 AC123835.1-201ENSMUST00000214362 670 ntBASIC3.18□□□□□ -1.9
Lire1P11260 Olfr966-ps1-201ENSMUST00000214875 577 ntBASIC3.18□□□□□ -1.9
Lire1P11260 Gm18488-201ENSMUST00000215082 364 ntBASIC3.18□□□□□ -1.9
Lire1P11260 Gm7745-202ENSMUST00000222914 567 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Lire1P11260 AC147633.1-201ENSMUST00000225134 259 ntBASIC3.18□□□□□ -1.9
Lire1P11260 CT030254.2-201ENSMUST00000225902 502 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Lire1P11260 AC126440.1-201ENSMUST00000227098 349 ntBASIC3.18□□□□□ -1.9
Lire1P11260 Mup5-201ENSMUST00000082287 925 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Lire1P11260 Gm23297-201ENSMUST00000083184 127 ntBASIC3.18□□□□□ -1.9
Lire1P11260 Olfr1313-202ENSMUST00000213577 2588 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Lire1P11260 Pak3-203ENSMUST00000112864 8612 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
Lire1P11260 Zbtb37-203ENSMUST00000162226 18814 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Lire1P11260 Gm3259-201ENSMUST00000101015 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.18□□□□□ -1.9
Lire1P11260 Vmn2r75-201ENSMUST00000167830 2562 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Lire1P11260 Olfr830-202ENSMUST00000212723 3105 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
Lire1P11260 Mir1198-201ENSMUST00000116995 121 ntBASIC3.17□□□□□ -1.9
Lire1P11260 Gm14657-201ENSMUST00000117461 302 ntBASIC3.17□□□□□ -1.9
Lire1P11260 Rpl31-ps22-201ENSMUST00000117961 337 ntBASIC3.17□□□□□ -1.9
Lire1P11260 Gm11813-201ENSMUST00000118586 291 ntBASIC3.17□□□□□ -1.9
Lire1P11260 Gm14602-201ENSMUST00000118625 340 ntBASIC3.17□□□□□ -1.9
Lire1P11260 Gm13482-201ENSMUST00000119842 254 ntBASIC3.17□□□□□ -1.9
Lire1P11260 Gm14506-201ENSMUST00000121165 536 ntBASIC3.17□□□□□ -1.9
Lire1P11260 Rpl30-ps9-201ENSMUST00000122265 345 ntBASIC3.17□□□□□ -1.9
Lire1P11260 Gm23559-201ENSMUST00000157824 103 ntBASIC3.17□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 84.8 ms