Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Gm16236-201ENSMUST00000159588 379 ntBASIC2.9□□□□□ -1.95
Chmp6P0C0A3 Gm22853-201ENSMUST00000174974 131 ntBASIC2.9□□□□□ -1.95
Chmp6P0C0A3 1700025F22Rik-202ENSMUST00000180678 658 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
Chmp6P0C0A3 1700025F22Rik-204ENSMUST00000181567 578 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
Chmp6P0C0A3 Gm29658-201ENSMUST00000185404 230 ntBASIC2.9□□□□□ -1.95
Chmp6P0C0A3 Csn1s2a-203ENSMUST00000196749 917 ntAPPRIS ALT2 TSL 1 (best) BASIC2.9□□□□□ -1.95
Chmp6P0C0A3 Igkv4-60-201ENSMUST00000200639 358 ntBASIC2.9□□□□□ -1.95
Chmp6P0C0A3 Gm44903-201ENSMUST00000206840 130 ntBASIC2.9□□□□□ -1.95
Chmp6P0C0A3 Gm18242-201ENSMUST00000218455 542 ntBASIC2.9□□□□□ -1.95
Chmp6P0C0A3 CT030184.1-201ENSMUST00000222393 416 ntBASIC2.9□□□□□ -1.95
Chmp6P0C0A3 AC154576.2-202ENSMUST00000223916 688 ntBASIC2.9□□□□□ -1.95
Chmp6P0C0A3 1700025F22Rik-201ENSMUST00000078770 650 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
Chmp6P0C0A3 Scgb1b2-201ENSMUST00000080635 424 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
Chmp6P0C0A3 4930522H14Rik-201ENSMUST00000082306 849 ntAPPRIS ALT2 TSL 1 (best) BASIC2.9□□□□□ -1.95
Chmp6P0C0A3 Olfr1453-201ENSMUST00000087773 924 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
Chmp6P0C0A3 Olfr1282-201ENSMUST00000099618 918 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
Chmp6P0C0A3 Olfr1240-202ENSMUST00000216123 4603 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.95
Chmp6P0C0A3 Olfr68-202ENSMUST00000216811 4093 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.95
Chmp6P0C0A3 Olfr509-202ENSMUST00000213756 3547 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.95
Chmp6P0C0A3 Olfr592-202ENSMUST00000106893 6566 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
Chmp6P0C0A3 AC115047.2-201ENSMUST00000214421 1848 ntBASIC2.89□□□□□ -1.95
Chmp6P0C0A3 Cpxcr1-201ENSMUST00000101269 1596 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
Chmp6P0C0A3 Gm10486-201ENSMUST00000101647 924 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
Chmp6P0C0A3 Klrc1-203ENSMUST00000118447 684 ntAPPRIS P3 TSL 1 (best) BASIC2.89□□□□□ -1.95
Chmp6P0C0A3 Gm14566-201ENSMUST00000118915 321 ntBASIC2.89□□□□□ -1.95
Chmp6P0C0A3 Gm14525-201ENSMUST00000119649 893 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
Chmp6P0C0A3 Vmn1r-ps106-201ENSMUST00000120587 824 ntBASIC2.89□□□□□ -1.95
Chmp6P0C0A3 Gm14100-201ENSMUST00000125575 651 ntTSL 3 BASIC2.89□□□□□ -1.95
Chmp6P0C0A3 Gm15279-201ENSMUST00000155593 288 ntBASIC2.89□□□□□ -1.95
Chmp6P0C0A3 Gm23470-201ENSMUST00000157129 120 ntBASIC2.89□□□□□ -1.95
Chmp6P0C0A3 Gm23391-201ENSMUST00000157579 104 ntBASIC2.89□□□□□ -1.95
Chmp6P0C0A3 Gm24681-201ENSMUST00000158760 107 ntBASIC2.89□□□□□ -1.95
Chmp6P0C0A3 Gm3025-201ENSMUST00000163454 489 ntBASIC2.89□□□□□ -1.95
Chmp6P0C0A3 Gm3298-201ENSMUST00000165289 516 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
Chmp6P0C0A3 Gm8206-202ENSMUST00000168733 516 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
Chmp6P0C0A3 Gm2878-201ENSMUST00000170173 486 ntBASIC2.89□□□□□ -1.95
Chmp6P0C0A3 Gm20407-201ENSMUST00000172891 598 ntTSL 3 BASIC2.89□□□□□ -1.95
Chmp6P0C0A3 Vmn1r-ps58-201ENSMUST00000174460 840 ntBASIC2.89□□□□□ -1.95
Chmp6P0C0A3 Gm44520-201ENSMUST00000205447 802 ntBASIC2.89□□□□□ -1.95
Chmp6P0C0A3 Olfr394-203ENSMUST00000216608 5628 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
Chmp6P0C0A3 AC160966.1-201ENSMUST00000217147 933 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
Chmp6P0C0A3 Gngt1-201ENSMUST00000031673 1183 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
Chmp6P0C0A3 Gm5168-201ENSMUST00000089165 824 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
Chmp6P0C0A3 Vmn1r185-208ENSMUST00000228004 5682 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
Chmp6P0C0A3 Vmn1r76-202ENSMUST00000226300 8189 ntAPPRIS ALT2 BASIC2.88□□□□□ -1.95
Chmp6P0C0A3 Gm20345-201ENSMUST00000175839 2414 ntBASIC2.88□□□□□ -1.95
Chmp6P0C0A3 Gm2066-201ENSMUST00000118046 389 ntBASIC2.88□□□□□ -1.95
Chmp6P0C0A3 Gm7429-201ENSMUST00000118664 348 ntBASIC2.88□□□□□ -1.95
Chmp6P0C0A3 Vmn1r-ps109-201ENSMUST00000119308 725 ntBASIC2.88□□□□□ -1.95
Chmp6P0C0A3 Gm2318-201ENSMUST00000119623 639 ntBASIC2.88□□□□□ -1.95
Chmp6P0C0A3 Gm14913-201ENSMUST00000120011 1093 ntBASIC2.88□□□□□ -1.95
Chmp6P0C0A3 Gm2005-201ENSMUST00000120759 542 ntBASIC2.88□□□□□ -1.95
Chmp6P0C0A3 Gm14982-201ENSMUST00000121102 442 ntBASIC2.88□□□□□ -1.95
Chmp6P0C0A3 Mup-ps15-201ENSMUST00000121741 539 ntBASIC2.88□□□□□ -1.95
Chmp6P0C0A3 Gm23463-201ENSMUST00000122468 99 ntBASIC2.88□□□□□ -1.95
Chmp6P0C0A3 2810403D21Rik-207ENSMUST00000152089 852 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
Chmp6P0C0A3 Gm5168-202ENSMUST00000168002 636 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
Chmp6P0C0A3 Gm17224-201ENSMUST00000171429 500 ntTSL 3 BASIC2.88□□□□□ -1.95
Chmp6P0C0A3 Gm17186-201ENSMUST00000171742 456 ntBASIC2.88□□□□□ -1.95
Chmp6P0C0A3 Gm20405-201ENSMUST00000174002 229 ntTSL 5 BASIC2.88□□□□□ -1.95
Chmp6P0C0A3 Gm7438-201ENSMUST00000177664 639 ntBASIC2.88□□□□□ -1.95
Chmp6P0C0A3 Gm7408-201ENSMUST00000178014 639 ntBASIC2.88□□□□□ -1.95
Chmp6P0C0A3 Gm7386-201ENSMUST00000178020 639 ntBASIC2.88□□□□□ -1.95
Chmp6P0C0A3 Cldn34c3-201ENSMUST00000178148 702 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
Chmp6P0C0A3 Gm3657-201ENSMUST00000178170 639 ntBASIC2.88□□□□□ -1.95
Chmp6P0C0A3 Gm7415-201ENSMUST00000178205 639 ntBASIC2.88□□□□□ -1.95
Chmp6P0C0A3 Gm7398-201ENSMUST00000178589 639 ntBASIC2.88□□□□□ -1.95
Chmp6P0C0A3 Gm7391-201ENSMUST00000178680 639 ntBASIC2.88□□□□□ -1.95
Chmp6P0C0A3 Gm5935-202ENSMUST00000178986 639 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
Chmp6P0C0A3 Gm7375-201ENSMUST00000179232 639 ntBASIC2.88□□□□□ -1.95
Chmp6P0C0A3 Gm3681-201ENSMUST00000179940 639 ntBASIC2.88□□□□□ -1.95
Chmp6P0C0A3 Gm27964-201ENSMUST00000185195 62 ntBASIC2.88□□□□□ -1.95
Chmp6P0C0A3 B230110G15Rik-201ENSMUST00000190868 772 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
Chmp6P0C0A3 Gm37768-201ENSMUST00000192748 887 ntTSL 3 BASIC2.88□□□□□ -1.95
Chmp6P0C0A3 Gm34599-201ENSMUST00000198924 288 ntTSL 3 BASIC2.88□□□□□ -1.95
Chmp6P0C0A3 Gm7675-201ENSMUST00000208828 686 ntBASIC2.88□□□□□ -1.95
Chmp6P0C0A3 Gm45614-201ENSMUST00000209994 721 ntBASIC2.88□□□□□ -1.95
Chmp6P0C0A3 Gm45452-201ENSMUST00000210905 177 ntBASIC2.88□□□□□ -1.95
Chmp6P0C0A3 1700061N14Rik-201ENSMUST00000212295 463 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
Chmp6P0C0A3 4930524N10Rik-201ENSMUST00000082357 919 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
Chmp6P0C0A3 Gm24817-201ENSMUST00000093672 105 ntBASIC2.88□□□□□ -1.95
Chmp6P0C0A3 Olfr1002-201ENSMUST00000099920 957 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
Chmp6P0C0A3 Gm5127-201ENSMUST00000101296 1455 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
Chmp6P0C0A3 Olfr1126-202ENSMUST00000213366 1827 ntAPPRIS P1 TSL 3 BASIC2.88□□□□□ -1.95
Chmp6P0C0A3 Olfr785-201ENSMUST00000204402 2014 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
Chmp6P0C0A3 Zfp280c-202ENSMUST00000076635 4355 ntAPPRIS P3 TSL 1 (best) BASIC2.88□□□□□ -1.95
Chmp6P0C0A3 Olfr1014-202ENSMUST00000213453 2447 ntAPPRIS P1 TSL 3 BASIC2.88□□□□□ -1.95
Chmp6P0C0A3 Csn1s1-205ENSMUST00000197631 1359 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
Chmp6P0C0A3 Olfr623-202ENSMUST00000213840 3980 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
Chmp6P0C0A3 Vmn1r3-201ENSMUST00000105159 1011 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
Chmp6P0C0A3 Gm22072-201ENSMUST00000116850 121 ntBASIC2.87□□□□□ -1.95
Chmp6P0C0A3 Gm12787-201ENSMUST00000119234 396 ntBASIC2.87□□□□□ -1.95
Chmp6P0C0A3 Gm14506-201ENSMUST00000121165 536 ntBASIC2.87□□□□□ -1.95
Chmp6P0C0A3 Gm14129-201ENSMUST00000122436 291 ntBASIC2.87□□□□□ -1.95
Chmp6P0C0A3 Gm15656-201ENSMUST00000132076 615 ntTSL 3 BASIC2.87□□□□□ -1.95
Chmp6P0C0A3 Gm13775-201ENSMUST00000153865 751 ntTSL 3 BASIC2.87□□□□□ -1.95
Chmp6P0C0A3 Gm24691-201ENSMUST00000157762 140 ntBASIC2.87□□□□□ -1.95
Chmp6P0C0A3 Gm23473-201ENSMUST00000158883 116 ntBASIC2.87□□□□□ -1.95
Chmp6P0C0A3 H3f3aos-202ENSMUST00000159740 229 ntTSL 5 BASIC2.87□□□□□ -1.95
Chmp6P0C0A3 Gm24082-201ENSMUST00000175175 83 ntBASIC2.87□□□□□ -1.95
Retrieved 100 of 76,532 protein–RNA pairs in 108.6 ms