Protein–RNA interactions for Protein: O88705

Hcn3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn3O88705 Mmrn1-203ENSMUST00000204333 4472 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
Hcn3O88705 AC173482.1-201ENSMUST00000224494 3815 ntBASIC3.69□□□□□ -1.82
Hcn3O88705 Lrrc19-201ENSMUST00000053419 2780 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Hcn3O88705 Trav16-201ENSMUST00000103667 420 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Hcn3O88705 Trdv5-201ENSMUST00000103685 438 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Hcn3O88705 Gm24125-201ENSMUST00000104105 137 ntBASIC3.68□□□□□ -1.82
Hcn3O88705 Gm8666-201ENSMUST00000117517 292 ntBASIC3.68□□□□□ -1.82
Hcn3O88705 Gm5287-201ENSMUST00000120666 598 ntBASIC3.68□□□□□ -1.82
Hcn3O88705 Gm15014-201ENSMUST00000120742 258 ntBASIC3.68□□□□□ -1.82
Hcn3O88705 Gm11479-201ENSMUST00000134275 387 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Hcn3O88705 Gm11351-201ENSMUST00000139335 583 ntTSL 2 BASIC3.68□□□□□ -1.82
Hcn3O88705 Etaa1os-202ENSMUST00000148496 388 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Hcn3O88705 Gm16250-201ENSMUST00000148974 256 ntBASIC3.68□□□□□ -1.82
Hcn3O88705 Gm25967-201ENSMUST00000157168 147 ntBASIC3.68□□□□□ -1.82
Hcn3O88705 Gm25965-201ENSMUST00000157170 93 ntBASIC3.68□□□□□ -1.82
Hcn3O88705 Gm25283-201ENSMUST00000157272 77 ntBASIC3.68□□□□□ -1.82
Hcn3O88705 Gm23123-201ENSMUST00000157648 144 ntBASIC3.68□□□□□ -1.82
Hcn3O88705 Gm26036-201ENSMUST00000158149 144 ntBASIC3.68□□□□□ -1.82
Hcn3O88705 Gm24727-201ENSMUST00000158231 144 ntBASIC3.68□□□□□ -1.82
Hcn3O88705 Gm24546-201ENSMUST00000158652 102 ntBASIC3.68□□□□□ -1.82
Hcn3O88705 Gm16567-201ENSMUST00000160967 576 ntTSL 5 BASIC3.68□□□□□ -1.82
Hcn3O88705 Gm27580-201ENSMUST00000183666 149 ntBASIC3.68□□□□□ -1.82
Hcn3O88705 Gm27490-201ENSMUST00000184754 128 ntBASIC3.68□□□□□ -1.82
Hcn3O88705 Gm29134-201ENSMUST00000186579 126 ntBASIC3.68□□□□□ -1.82
Hcn3O88705 Rhoay-ps3-201ENSMUST00000187648 576 ntBASIC3.68□□□□□ -1.82
Hcn3O88705 Gm29443-202ENSMUST00000190297 410 ntTSL 3 BASIC3.68□□□□□ -1.82
Hcn3O88705 Gm29334-201ENSMUST00000190334 357 ntBASIC3.68□□□□□ -1.82
Hcn3O88705 Topbp1-ps2-201ENSMUST00000191289 189 ntBASIC3.68□□□□□ -1.82
Hcn3O88705 Gm32447-201ENSMUST00000194265 697 ntBASIC3.68□□□□□ -1.82
Hcn3O88705 Gm34015-201ENSMUST00000194908 451 ntBASIC3.68□□□□□ -1.82
Hcn3O88705 Gm42526-201ENSMUST00000198956 393 ntBASIC3.68□□□□□ -1.82
Hcn3O88705 4930404A12Rik-201ENSMUST00000199356 726 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Hcn3O88705 Gm44748-201ENSMUST00000206040 658 ntTSL 5 BASIC3.68□□□□□ -1.82
Hcn3O88705 Gm34838-201ENSMUST00000209231 958 ntTSL 5 BASIC3.68□□□□□ -1.82
Hcn3O88705 Olfr546-ps1-201ENSMUST00000210328 326 ntBASIC3.68□□□□□ -1.82
Hcn3O88705 Olfr936-202ENSMUST00000216912 937 ntBASIC3.68□□□□□ -1.82
Hcn3O88705 AC121286.1-201ENSMUST00000218811 380 ntTSL 3 BASIC3.68□□□□□ -1.82
Hcn3O88705 Olfr295-201ENSMUST00000078447 930 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Hcn3O88705 Olfr885-201ENSMUST00000081985 930 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Hcn3O88705 mt-Tr-201ENSMUST00000082412 68 ntBASIC3.68□□□□□ -1.82
Hcn3O88705 E430014B02Rik-201ENSMUST00000194215 3156 ntBASIC3.68□□□□□ -1.82
Hcn3O88705 Pramel6-202ENSMUST00000111572 1781 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Hcn3O88705 Gm45030-201ENSMUST00000207575 1774 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Hcn3O88705 AC153887.2-201ENSMUST00000219160 3838 ntBASIC3.68□□□□□ -1.82
Hcn3O88705 Olfr644-203ENSMUST00000213991 3506 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Hcn3O88705 Olfr1448-204ENSMUST00000216888 4064 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Hcn3O88705 Tug1-202ENSMUST00000144852 4720 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Hcn3O88705 Gm43016-201ENSMUST00000196628 3150 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Hcn3O88705 Gm22656-201ENSMUST00000104199 171 ntBASIC3.67□□□□□ -1.82
Hcn3O88705 Gm22676-201ENSMUST00000116972 129 ntBASIC3.67□□□□□ -1.82
Hcn3O88705 Gm11386-201ENSMUST00000117761 347 ntBASIC3.67□□□□□ -1.82
Hcn3O88705 Gm12787-201ENSMUST00000119234 396 ntBASIC3.67□□□□□ -1.82
Hcn3O88705 Gm25177-201ENSMUST00000122634 117 ntBASIC3.67□□□□□ -1.82
Hcn3O88705 Gm3669-202ENSMUST00000127852 397 ntTSL 3 BASIC3.67□□□□□ -1.82
Hcn3O88705 Gm2101-201ENSMUST00000128191 397 ntTSL 3 BASIC3.67□□□□□ -1.82
Hcn3O88705 Gm13661-201ENSMUST00000154297 318 ntTSL 3 BASIC3.67□□□□□ -1.82
Hcn3O88705 Gm2165-205ENSMUST00000155337 397 ntTSL 3 BASIC3.67□□□□□ -1.82
Hcn3O88705 Gm22211-201ENSMUST00000158097 156 ntBASIC3.67□□□□□ -1.82
Hcn3O88705 Gm24552-201ENSMUST00000158646 103 ntBASIC3.67□□□□□ -1.82
Hcn3O88705 Gm3646-201ENSMUST00000171319 352 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Hcn3O88705 Vmn2r-ps79-201ENSMUST00000174256 377 ntBASIC3.67□□□□□ -1.82
Hcn3O88705 Gm19898-201ENSMUST00000177490 251 ntBASIC3.67□□□□□ -1.82
Hcn3O88705 Mir7074-201ENSMUST00000183884 63 ntBASIC3.67□□□□□ -1.82
Hcn3O88705 Gm18356-201ENSMUST00000185677 623 ntBASIC3.67□□□□□ -1.82
Hcn3O88705 Gm28304-201ENSMUST00000185977 312 ntBASIC3.67□□□□□ -1.82
Hcn3O88705 Gm28661-201ENSMUST00000188231 681 ntBASIC3.67□□□□□ -1.82
Hcn3O88705 Gm29256-201ENSMUST00000189094 312 ntBASIC3.67□□□□□ -1.82
Hcn3O88705 Gm28484-201ENSMUST00000190606 312 ntBASIC3.67□□□□□ -1.82
Hcn3O88705 1700027F06Rik-201ENSMUST00000203901 243 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Hcn3O88705 Zfp813-ps-202ENSMUST00000204773 618 ntTSL 5 BASIC3.67□□□□□ -1.82
Hcn3O88705 Olfr662-ps1-201ENSMUST00000210704 396 ntBASIC3.67□□□□□ -1.82
Hcn3O88705 Gm19219-201ENSMUST00000215863 724 ntBASIC3.67□□□□□ -1.82
Hcn3O88705 AC153938.2-201ENSMUST00000218388 580 ntTSL 5 BASIC3.67□□□□□ -1.82
Hcn3O88705 AC100590.3-201ENSMUST00000219355 332 ntTSL 5 BASIC3.67□□□□□ -1.82
Hcn3O88705 Gm35865-201ENSMUST00000220180 287 ntTSL 3 BASIC3.67□□□□□ -1.82
Hcn3O88705 AC167669.1-201ENSMUST00000224932 384 ntBASIC3.67□□□□□ -1.82
Hcn3O88705 Sprr2e-201ENSMUST00000068399 647 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Hcn3O88705 Mir21a-201ENSMUST00000083521 92 ntBASIC3.67□□□□□ -1.82
Hcn3O88705 Zc3h14-201ENSMUST00000021399 1430 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Hcn3O88705 Gm43871-201ENSMUST00000204931 1955 ntBASIC3.67□□□□□ -1.82
Hcn3O88705 Gm7173-201ENSMUST00000101410 2832 ntAPPRIS P4 TSL 5 BASIC3.66□□□□□ -1.82
Hcn3O88705 Gm38207-201ENSMUST00000193009 3505 ntBASIC3.66□□□□□ -1.82
Hcn3O88705 Gpr34-201ENSMUST00000041708 2088 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Hcn3O88705 Csmd3-209ENSMUST00000162830 13012 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Hcn3O88705 AC137842.3-201ENSMUST00000228855 2397 ntBASIC3.66□□□□□ -1.82
Hcn3O88705 Gm45304-201ENSMUST00000210303 2828 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Hcn3O88705 Wfdc18-201ENSMUST00000001009 521 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Hcn3O88705 Rpl23a-201ENSMUST00000102483 560 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Hcn3O88705 Igkv1-135-201ENSMUST00000103303 394 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Hcn3O88705 Snord66-201ENSMUST00000104051 75 ntBASIC3.66□□□□□ -1.82
Hcn3O88705 Gm23481-201ENSMUST00000104173 131 ntBASIC3.66□□□□□ -1.82
Hcn3O88705 Gm22493-201ENSMUST00000104494 132 ntBASIC3.66□□□□□ -1.82
Hcn3O88705 Gm14401-201ENSMUST00000108968 247 ntTSL 5 BASIC3.66□□□□□ -1.82
Hcn3O88705 2610042L04Rik-201ENSMUST00000112778 599 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Hcn3O88705 Gm2066-201ENSMUST00000118046 389 ntBASIC3.66□□□□□ -1.82
Hcn3O88705 Sval2-202ENSMUST00000119995 463 ntTSL 3 BASIC3.66□□□□□ -1.82
Hcn3O88705 Spink2-202ENSMUST00000120429 594 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Hcn3O88705 Gm14638-201ENSMUST00000121338 216 ntBASIC3.66□□□□□ -1.82
Hcn3O88705 Gm11229-201ENSMUST00000121993 437 ntBASIC3.66□□□□□ -1.82
Hcn3O88705 Gm11506-201ENSMUST00000122414 470 ntBASIC3.66□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 100 ms