Protein–RNA interactions for Protein: O88609

Lmx1b, LIM homeobox transcription factor 1-beta, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmx1bO88609 Vmn2r50-202ENSMUST00000086298 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
Lmx1bO88609 Olfr1269-202ENSMUST00000214404 3535 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Lmx1bO88609 Gm44164-201ENSMUST00000203605 2561 ntBASIC3.68□□□□□ -1.82
Lmx1bO88609 Olfr728-202ENSMUST00000213685 7087 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Lmx1bO88609 Gm29674-202ENSMUST00000219664 4083 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Lmx1bO88609 Vmn1r169-205ENSMUST00000228832 2749 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
Lmx1bO88609 Mir667-201ENSMUST00000102441 92 ntBASIC3.68□□□□□ -1.82
Lmx1bO88609 Gm15010-201ENSMUST00000117153 407 ntBASIC3.68□□□□□ -1.82
Lmx1bO88609 Gm12924-201ENSMUST00000121747 318 ntBASIC3.68□□□□□ -1.82
Lmx1bO88609 Gm14473-201ENSMUST00000122269 557 ntBASIC3.68□□□□□ -1.82
Lmx1bO88609 Gm13686-201ENSMUST00000122851 350 ntTSL 3 BASIC3.68□□□□□ -1.82
Lmx1bO88609 Gm15671-201ENSMUST00000124160 576 ntTSL 5 BASIC3.68□□□□□ -1.82
Lmx1bO88609 Ear10-201ENSMUST00000159175 678 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Lmx1bO88609 Mir5099-201ENSMUST00000175257 74 ntBASIC3.68□□□□□ -1.82
Lmx1bO88609 Gm26426-201ENSMUST00000177866 123 ntBASIC3.68□□□□□ -1.82
Lmx1bO88609 Gm23660-201ENSMUST00000178362 79 ntBASIC3.68□□□□□ -1.82
Lmx1bO88609 Gm24088-201ENSMUST00000179100 79 ntBASIC3.68□□□□□ -1.82
Lmx1bO88609 Gm26060-201ENSMUST00000180094 123 ntBASIC3.68□□□□□ -1.82
Lmx1bO88609 Gm21673-201ENSMUST00000186640 436 ntBASIC3.68□□□□□ -1.82
Lmx1bO88609 Gm19503-201ENSMUST00000187109 241 ntBASIC3.68□□□□□ -1.82
Lmx1bO88609 Gm21135-201ENSMUST00000189023 436 ntBASIC3.68□□□□□ -1.82
Lmx1bO88609 4930452N14Rik-201ENSMUST00000189240 613 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Lmx1bO88609 Gm28500-201ENSMUST00000190286 151 ntBASIC3.68□□□□□ -1.82
Lmx1bO88609 Gm37898-201ENSMUST00000193781 174 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Lmx1bO88609 Gm43730-201ENSMUST00000199863 372 ntBASIC3.68□□□□□ -1.82
Lmx1bO88609 Gm7468-201ENSMUST00000203900 652 ntBASIC3.68□□□□□ -1.82
Lmx1bO88609 Gm18423-201ENSMUST00000205144 1074 ntBASIC3.68□□□□□ -1.82
Lmx1bO88609 1700011C11Rik-201ENSMUST00000205268 365 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Lmx1bO88609 AC160134.1-201ENSMUST00000213450 551 ntBASIC3.68□□□□□ -1.82
Lmx1bO88609 Gm39473-201ENSMUST00000223498 522 ntTSL 3 BASIC3.68□□□□□ -1.82
Lmx1bO88609 AC154358.1-201ENSMUST00000224871 218 ntBASIC3.68□□□□□ -1.82
Lmx1bO88609 AC161572.1-201ENSMUST00000227486 640 ntBASIC3.68□□□□□ -1.82
Lmx1bO88609 Kap-201ENSMUST00000048032 707 ntAPPRIS P2 TSL 1 (best) BASIC3.68□□□□□ -1.82
Lmx1bO88609 Defb11-201ENSMUST00000051965 317 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Lmx1bO88609 2610303G11Rik-201ENSMUST00000061643 517 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Lmx1bO88609 Gm25793-201ENSMUST00000083287 107 ntBASIC3.68□□□□□ -1.82
Lmx1bO88609 Gm22740-201ENSMUST00000083439 109 ntBASIC3.68□□□□□ -1.82
Lmx1bO88609 Rps24-ps2-201ENSMUST00000091375 395 ntBASIC3.68□□□□□ -1.82
Lmx1bO88609 Gm813-201ENSMUST00000099663 702 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Lmx1bO88609 Zfp85-202ENSMUST00000144183 2312 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Lmx1bO88609 Vmn2r76-201ENSMUST00000165771 2562 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Lmx1bO88609 Adam26a-201ENSMUST00000049577 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Lmx1bO88609 Gm609-201ENSMUST00000114585 2122 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Lmx1bO88609 Gpr174-203ENSMUST00000118820 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Lmx1bO88609 Txndc9-204ENSMUST00000193832 3472 ntTSL 2 BASIC3.68□□□□□ -1.82
Lmx1bO88609 Gm38091-201ENSMUST00000192418 3871 ntBASIC3.68□□□□□ -1.82
Lmx1bO88609 Erbin-207ENSMUST00000191275 5552 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
Lmx1bO88609 5830444F18Rik-201ENSMUST00000194009 1992 ntBASIC3.67□□□□□ -1.82
Lmx1bO88609 Gm43327-201ENSMUST00000199285 4055 ntBASIC3.67□□□□□ -1.82
Lmx1bO88609 Ktn1-201ENSMUST00000022391 4484 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
Lmx1bO88609 Skint4-201ENSMUST00000069769 3367 ntAPPRIS ALT2 TSL 2 BASIC3.67□□□□□ -1.82
Lmx1bO88609 Olfr1249-202ENSMUST00000216124 3047 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Lmx1bO88609 Olfr855-202ENSMUST00000215587 1797 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Lmx1bO88609 Mir592-201ENSMUST00000102113 96 ntBASIC3.67□□□□□ -1.82
Lmx1bO88609 Gm24792-201ENSMUST00000104286 128 ntBASIC3.67□□□□□ -1.82
Lmx1bO88609 Gm26019-201ENSMUST00000104407 119 ntBASIC3.67□□□□□ -1.82
Lmx1bO88609 Gm7164-201ENSMUST00000117503 450 ntBASIC3.67□□□□□ -1.82
Lmx1bO88609 Tmc4-ps-201ENSMUST00000117819 258 ntBASIC3.67□□□□□ -1.82
Lmx1bO88609 Gm9850-201ENSMUST00000117916 227 ntBASIC3.67□□□□□ -1.82
Lmx1bO88609 Gm13717-201ENSMUST00000119868 365 ntBASIC3.67□□□□□ -1.82
Lmx1bO88609 Gm14578-201ENSMUST00000122166 391 ntBASIC3.67□□□□□ -1.82
Lmx1bO88609 Gm15147-201ENSMUST00000122263 483 ntBASIC3.67□□□□□ -1.82
Lmx1bO88609 Gm25806-201ENSMUST00000122782 122 ntBASIC3.67□□□□□ -1.82
Lmx1bO88609 Gm24898-201ENSMUST00000158133 106 ntBASIC3.67□□□□□ -1.82
Lmx1bO88609 Gm23141-201ENSMUST00000178682 94 ntBASIC3.67□□□□□ -1.82
Lmx1bO88609 Gm23816-201ENSMUST00000179617 132 ntBASIC3.67□□□□□ -1.82
Lmx1bO88609 Trdv1-202ENSMUST00000187163 334 ntAPPRIS ALT2 BASIC3.67□□□□□ -1.82
Lmx1bO88609 Gml2-203ENSMUST00000188180 649 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
Lmx1bO88609 Gm18357-201ENSMUST00000188184 580 ntBASIC3.67□□□□□ -1.82
Lmx1bO88609 Gm18551-201ENSMUST00000195594 642 ntBASIC3.67□□□□□ -1.82
Lmx1bO88609 Gm42451-201ENSMUST00000197410 244 ntBASIC3.67□□□□□ -1.82
Lmx1bO88609 Gm44174-201ENSMUST00000205022 141 ntTSL 2 BASIC3.67□□□□□ -1.82
Lmx1bO88609 Klk1b18-ps-201ENSMUST00000205780 167 ntBASIC3.67□□□□□ -1.82
Lmx1bO88609 Gm44720-201ENSMUST00000206076 260 ntBASIC3.67□□□□□ -1.82
Lmx1bO88609 Olfr192-203ENSMUST00000206214 1054 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Lmx1bO88609 Gm45614-201ENSMUST00000209994 721 ntBASIC3.67□□□□□ -1.82
Lmx1bO88609 Gm6012-201ENSMUST00000210821 730 ntBASIC3.67□□□□□ -1.82
Lmx1bO88609 AL450317.1-201ENSMUST00000213941 291 ntBASIC3.67□□□□□ -1.82
Lmx1bO88609 Olfr1070-ps1-201ENSMUST00000215939 388 ntBASIC3.67□□□□□ -1.82
Lmx1bO88609 Gm19326-201ENSMUST00000219818 326 ntBASIC3.67□□□□□ -1.82
Lmx1bO88609 AC125311.1-201ENSMUST00000226950 220 ntBASIC3.67□□□□□ -1.82
Lmx1bO88609 Mir28a-201ENSMUST00000083560 86 ntBASIC3.67□□□□□ -1.82
Lmx1bO88609 AC140397.1-201ENSMUST00000225563 4562 ntBASIC3.67□□□□□ -1.82
Lmx1bO88609 Olfr722-201ENSMUST00000053290 1582 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Lmx1bO88609 Erv3-201ENSMUST00000040941 3378 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Lmx1bO88609 Gm13630-201ENSMUST00000127849 3650 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Lmx1bO88609 Gm10484-201ENSMUST00000196372 4759 ntBASIC3.66□□□□□ -1.82
Lmx1bO88609 BC002059-202ENSMUST00000190415 1964 ntTSL 2 BASIC3.66□□□□□ -1.82
Lmx1bO88609 Olfr919-202ENSMUST00000215612 1992 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
Lmx1bO88609 Vmn2r31-201ENSMUST00000075108 3660 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Lmx1bO88609 Gm22472-201ENSMUST00000104115 134 ntBASIC3.66□□□□□ -1.82
Lmx1bO88609 Gm12568-201ENSMUST00000117362 624 ntBASIC3.66□□□□□ -1.82
Lmx1bO88609 Gm13510-201ENSMUST00000118659 429 ntBASIC3.66□□□□□ -1.82
Lmx1bO88609 Gm15313-201ENSMUST00000119179 282 ntBASIC3.66□□□□□ -1.82
Lmx1bO88609 Gm6584-201ENSMUST00000119671 447 ntBASIC3.66□□□□□ -1.82
Lmx1bO88609 Gm11430-201ENSMUST00000121317 217 ntBASIC3.66□□□□□ -1.82
Lmx1bO88609 Gm15167-201ENSMUST00000121997 187 ntBASIC3.66□□□□□ -1.82
Lmx1bO88609 Gm15969-201ENSMUST00000151967 236 ntTSL 3 BASIC3.66□□□□□ -1.82
Lmx1bO88609 Gm6058-201ENSMUST00000154261 399 ntBASIC3.66□□□□□ -1.82
Lmx1bO88609 Gm24504-201ENSMUST00000157679 100 ntBASIC3.66□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 81.6 ms