Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Gm37598-201ENSMUST00000194506 1301 ntBASIC1.89□□□□□ -2.11
Hmgb3O54879 Olfr894-202ENSMUST00000212992 3234 ntAPPRIS ALT2 TSL 5 BASIC1.89□□□□□ -2.11
Hmgb3O54879 Gm45844-205ENSMUST00000210333 3861 ntAPPRIS P5 TSL 1 (best) BASIC1.89□□□□□ -2.11
Hmgb3O54879 Gm15314-201ENSMUST00000120740 1887 ntBASIC1.88□□□□□ -2.11
Hmgb3O54879 Csn1s1-205ENSMUST00000197631 1359 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
Hmgb3O54879 Vmn1r121-201ENSMUST00000105197 945 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
Hmgb3O54879 Gm14459-201ENSMUST00000115573 540 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
Hmgb3O54879 Mir1192-201ENSMUST00000116976 121 ntBASIC1.88□□□□□ -2.11
Hmgb3O54879 Gm12386-201ENSMUST00000117380 688 ntBASIC1.88□□□□□ -2.11
Hmgb3O54879 Gm13082-201ENSMUST00000118877 561 ntBASIC1.88□□□□□ -2.11
Hmgb3O54879 Gm11252-201ENSMUST00000120572 939 ntBASIC1.88□□□□□ -2.11
Hmgb3O54879 Gm7327-201ENSMUST00000120925 652 ntBASIC1.88□□□□□ -2.11
Hmgb3O54879 Gm13862-201ENSMUST00000121220 197 ntBASIC1.88□□□□□ -2.11
Hmgb3O54879 Gm9225-201ENSMUST00000121921 836 ntBASIC1.88□□□□□ -2.11
Hmgb3O54879 Gm25321-201ENSMUST00000122558 102 ntBASIC1.88□□□□□ -2.11
Hmgb3O54879 Gm15584-201ENSMUST00000123231 759 ntTSL 2 BASIC1.88□□□□□ -2.11
Hmgb3O54879 Gm22560-201ENSMUST00000157332 120 ntBASIC1.88□□□□□ -2.11
Hmgb3O54879 Gm22769-201ENSMUST00000158367 98 ntBASIC1.88□□□□□ -2.11
Hmgb3O54879 Gm15900-201ENSMUST00000161584 342 ntBASIC1.88□□□□□ -2.11
Hmgb3O54879 Gm5916-201ENSMUST00000168452 1142 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
Hmgb3O54879 Naa60-211ENSMUST00000176625 876 ntTSL 2 BASIC1.88□□□□□ -2.11
Hmgb3O54879 Gm29322-201ENSMUST00000185378 582 ntTSL 5 BASIC1.88□□□□□ -2.11
Hmgb3O54879 Gm17946-201ENSMUST00000186856 538 ntBASIC1.88□□□□□ -2.11
Hmgb3O54879 Gm9541-201ENSMUST00000188409 502 ntBASIC1.88□□□□□ -2.11
Hmgb3O54879 Gm18956-201ENSMUST00000192857 480 ntBASIC1.88□□□□□ -2.11
Hmgb3O54879 Mir9-1-201ENSMUST00000199907 89 ntBASIC1.88□□□□□ -2.11
Hmgb3O54879 Gm43368-201ENSMUST00000200638 409 ntBASIC1.88□□□□□ -2.11
Hmgb3O54879 Gm42474-201ENSMUST00000201073 505 ntBASIC1.88□□□□□ -2.11
Hmgb3O54879 Gm44161-201ENSMUST00000203532 253 ntBASIC1.88□□□□□ -2.11
Hmgb3O54879 AC153361.2-202ENSMUST00000220405 842 ntTSL 5 BASIC1.88□□□□□ -2.11
Hmgb3O54879 CT009713.6-201ENSMUST00000223615 294 ntBASIC1.88□□□□□ -2.11
Hmgb3O54879 Olfr851-201ENSMUST00000064582 939 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
Hmgb3O54879 Olfr786-201ENSMUST00000076508 939 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
Hmgb3O54879 Olfr24-203ENSMUST00000216754 4327 ntAPPRIS P1 TSL 2 BASIC1.88□□□□□ -2.11
Hmgb3O54879 Gm44049-201ENSMUST00000204905 2984 ntBASIC1.88□□□□□ -2.11
Hmgb3O54879 Olfr1051-202ENSMUST00000216432 2807 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
Hmgb3O54879 Olfr1051-203ENSMUST00000217245 2821 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
Hmgb3O54879 Olfr1051-204ENSMUST00000217294 2840 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
Hmgb3O54879 Gm45577-201ENSMUST00000210206 2287 ntBASIC1.87□□□□□ -2.11
Hmgb3O54879 Gm22023-201ENSMUST00000104354 130 ntBASIC1.87□□□□□ -2.11
Hmgb3O54879 Gm14020-201ENSMUST00000118165 662 ntBASIC1.87□□□□□ -2.11
Hmgb3O54879 Gm15126-201ENSMUST00000118631 833 ntBASIC1.87□□□□□ -2.11
Hmgb3O54879 Gm11943-201ENSMUST00000119473 327 ntBASIC1.87□□□□□ -2.11
Hmgb3O54879 Gm16017-201ENSMUST00000119834 208 ntBASIC1.87□□□□□ -2.11
Hmgb3O54879 Gm13266-201ENSMUST00000141869 579 ntTSL 2 BASIC1.87□□□□□ -2.11
Hmgb3O54879 Gm7568-203ENSMUST00000161626 415 ntTSL 3 BASIC1.87□□□□□ -2.11
Hmgb3O54879 1700010K23Rik-201ENSMUST00000174502 376 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
Hmgb3O54879 Gm21798-201ENSMUST00000180105 261 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
Hmgb3O54879 Gm5224-201ENSMUST00000183060 350 ntBASIC1.87□□□□□ -2.11
Hmgb3O54879 Obox4-ps3-201ENSMUST00000183474 520 ntBASIC1.87□□□□□ -2.11
Hmgb3O54879 Gm37331-201ENSMUST00000192367 3375 ntBASIC1.87□□□□□ -2.11
Hmgb3O54879 Gm37296-201ENSMUST00000192728 2922 ntBASIC1.87□□□□□ -2.11
Hmgb3O54879 Gm37083-201ENSMUST00000195784 711 ntTSL 2 BASIC1.87□□□□□ -2.11
Hmgb3O54879 Mir7217-201ENSMUST00000200304 62 ntBASIC1.87□□□□□ -2.11
Hmgb3O54879 Gm18228-201ENSMUST00000217297 1091 ntBASIC1.87□□□□□ -2.11
Hmgb3O54879 CT025619.4-201ENSMUST00000217362 350 ntTSL 2 BASIC1.87□□□□□ -2.11
Hmgb3O54879 Gm5655-201ENSMUST00000221078 901 ntBASIC1.87□□□□□ -2.11
Hmgb3O54879 CT030704.1-201ENSMUST00000227521 699 ntBASIC1.87□□□□□ -2.11
Hmgb3O54879 Gm24165-201ENSMUST00000082718 128 ntBASIC1.87□□□□□ -2.11
Hmgb3O54879 Olfr681-203ENSMUST00000215517 4324 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
Hmgb3O54879 Ifi203-202ENSMUST00000081216 3610 ntAPPRIS P3 TSL 1 (best) BASIC1.87□□□□□ -2.11
Hmgb3O54879 Gm3081-201ENSMUST00000193413 3025 ntBASIC1.86□□□□□ -2.11
Hmgb3O54879 Catsper4-202ENSMUST00000105878 632 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
Hmgb3O54879 Gm12787-201ENSMUST00000119234 396 ntBASIC1.86□□□□□ -2.11
Hmgb3O54879 Mup-ps17-201ENSMUST00000120723 218 ntBASIC1.86□□□□□ -2.11
Hmgb3O54879 Gm12693-201ENSMUST00000121965 483 ntBASIC1.86□□□□□ -2.11
Hmgb3O54879 Gm14800-201ENSMUST00000122084 1272 ntBASIC1.86□□□□□ -2.11
Hmgb3O54879 Gm15218-201ENSMUST00000131006 618 ntTSL 5 BASIC1.86□□□□□ -2.11
Hmgb3O54879 Gm15692-201ENSMUST00000152173 352 ntBASIC1.86□□□□□ -2.11
Hmgb3O54879 Gm24138-201ENSMUST00000157572 114 ntBASIC1.86□□□□□ -2.11
Hmgb3O54879 Gm22517-201ENSMUST00000158265 136 ntBASIC1.86□□□□□ -2.11
Hmgb3O54879 Gm23005-201ENSMUST00000158950 136 ntBASIC1.86□□□□□ -2.11
Hmgb3O54879 Esp36-201ENSMUST00000172814 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC1.86□□□□□ -2.11
Hmgb3O54879 Vmn2r-ps64-201ENSMUST00000173690 523 ntBASIC1.86□□□□□ -2.11
Hmgb3O54879 Esp36-202ENSMUST00000177882 1117 ntAPPRIS P2 TSL 1 (best) BASIC1.86□□□□□ -2.11
Hmgb3O54879 Gm28779-201ENSMUST00000189678 323 ntBASIC1.86□□□□□ -2.11
Hmgb3O54879 Gm7858-201ENSMUST00000190177 622 ntBASIC1.86□□□□□ -2.11
Hmgb3O54879 Gm37557-201ENSMUST00000191640 139 ntBASIC1.86□□□□□ -2.11
Hmgb3O54879 Trbv27-201ENSMUST00000193711 277 ntBASIC1.86□□□□□ -2.11
Hmgb3O54879 Igkv8-31-201ENSMUST00000200040 372 ntBASIC1.86□□□□□ -2.11
Hmgb3O54879 Trav12-4-201ENSMUST00000200663 271 ntBASIC1.86□□□□□ -2.11
Hmgb3O54879 Gm43224-201ENSMUST00000201567 898 ntBASIC1.86□□□□□ -2.11
Hmgb3O54879 Gm35386-201ENSMUST00000204603 629 ntTSL 3 BASIC1.86□□□□□ -2.11
Hmgb3O54879 Gm36816-202ENSMUST00000205197 504 ntTSL 5 BASIC1.86□□□□□ -2.11
Hmgb3O54879 Gm44818-201ENSMUST00000206608 358 ntBASIC1.86□□□□□ -2.11
Hmgb3O54879 Spcs2-202ENSMUST00000207063 727 ntTSL 2 BASIC1.86□□□□□ -2.11
Hmgb3O54879 Gm7675-201ENSMUST00000208828 686 ntBASIC1.86□□□□□ -2.11
Hmgb3O54879 Gm45772-201ENSMUST00000212961 240 ntBASIC1.86□□□□□ -2.11
Hmgb3O54879 Gm46234-201ENSMUST00000218702 259 ntBASIC1.86□□□□□ -2.11
Hmgb3O54879 AC132881.2-201ENSMUST00000225474 709 ntBASIC1.86□□□□□ -2.11
Hmgb3O54879 Gm23615-201ENSMUST00000082602 65 ntBASIC1.86□□□□□ -2.11
Hmgb3O54879 Mndal-202ENSMUST00000186442 1646 ntAPPRIS ALT2 TSL 5 BASIC1.86□□□□□ -2.11
Hmgb3O54879 Olfr1186-202ENSMUST00000215912 1850 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
Hmgb3O54879 Vmn1r178-204ENSMUST00000226640 2282 ntBASIC1.86□□□□□ -2.11
Hmgb3O54879 Ogn-201ENSMUST00000021822 2566 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
Hmgb3O54879 Gm13136-201ENSMUST00000121031 2950 ntBASIC1.85□□□□□ -2.11
Hmgb3O54879 Cd209e-201ENSMUST00000033888 1802 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
Hmgb3O54879 Gm6913-201ENSMUST00000100019 348 ntBASIC1.85□□□□□ -2.11
Hmgb3O54879 Gm22115-201ENSMUST00000103976 133 ntBASIC1.85□□□□□ -2.11
Hmgb3O54879 Gm23923-201ENSMUST00000104108 133 ntBASIC1.85□□□□□ -2.11
Retrieved 100 of 76,532 protein–RNA pairs in 83.9 ms