Protein–RNA interactions for Protein: O35988

Sdc4, Syndecan-4, mousemouse

Known RBP Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc4O35988 CT030254.3-201ENSMUST00000225959 1231 ntBASIC2.19□□□□□ -2.06
Sdc4O35988 CT030662.1-201ENSMUST00000227380 232 ntBASIC2.19□□□□□ -2.06
Sdc4O35988 AC147545.1-201ENSMUST00000227528 108 ntBASIC2.19□□□□□ -2.06
Sdc4O35988 Gm22978-201ENSMUST00000082607 160 ntBASIC2.19□□□□□ -2.06
Sdc4O35988 Gm25199-201ENSMUST00000083095 104 ntBASIC2.19□□□□□ -2.06
Sdc4O35988 Prl6a1-202ENSMUST00000091680 868 ntAPPRIS P2 TSL 1 (best) BASIC2.19□□□□□ -2.06
Sdc4O35988 Olfr794-202ENSMUST00000204820 3044 ntAPPRIS P1 TSL 2 BASIC2.19□□□□□ -2.06
Sdc4O35988 Olfr1313-202ENSMUST00000213577 2588 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
Sdc4O35988 Olfr1039-203ENSMUST00000216566 4166 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
Sdc4O35988 Gm1330-202ENSMUST00000109942 555 ntAPPRIS ALT2 TSL 5 BASIC2.18□□□□□ -2.06
Sdc4O35988 BC117090-201ENSMUST00000114850 387 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
Sdc4O35988 Gm12509-201ENSMUST00000118033 609 ntBASIC2.18□□□□□ -2.06
Sdc4O35988 Gm14943-201ENSMUST00000118056 546 ntBASIC2.18□□□□□ -2.06
Sdc4O35988 Gm11460-201ENSMUST00000118200 361 ntBASIC2.18□□□□□ -2.06
Sdc4O35988 Gm12587-201ENSMUST00000120180 427 ntBASIC2.18□□□□□ -2.06
Sdc4O35988 Gm5958-201ENSMUST00000147698 297 ntBASIC2.18□□□□□ -2.06
Sdc4O35988 Gm22561-201ENSMUST00000157331 84 ntBASIC2.18□□□□□ -2.06
Sdc4O35988 Gm23476-201ENSMUST00000158881 274 ntBASIC2.18□□□□□ -2.06
Sdc4O35988 Gm8292-201ENSMUST00000162574 396 ntBASIC2.18□□□□□ -2.06
Sdc4O35988 Gm24813-201ENSMUST00000175310 84 ntBASIC2.18□□□□□ -2.06
Sdc4O35988 Gm27233-201ENSMUST00000184030 307 ntBASIC2.18□□□□□ -2.06
Sdc4O35988 Mir6997-201ENSMUST00000184313 71 ntBASIC2.18□□□□□ -2.06
Sdc4O35988 Gm19498-201ENSMUST00000191128 331 ntBASIC2.18□□□□□ -2.06
Sdc4O35988 9530003O04Rik-201ENSMUST00000192663 908 ntBASIC2.18□□□□□ -2.06
Sdc4O35988 Gm45600-201ENSMUST00000210828 234 ntTSL 5 BASIC2.18□□□□□ -2.06
Sdc4O35988 AC167250.1-202ENSMUST00000213629 672 ntTSL 3 BASIC2.18□□□□□ -2.06
Sdc4O35988 4930567K20Rik-203ENSMUST00000220108 646 ntTSL 5 BASIC2.18□□□□□ -2.06
Sdc4O35988 Gm1330-201ENSMUST00000081553 474 ntAPPRIS P5 TSL 5 BASIC2.18□□□□□ -2.06
Sdc4O35988 Hmgb1l-201ENSMUST00000082150 571 ntBASIC2.18□□□□□ -2.06
Sdc4O35988 Gm44680-201ENSMUST00000208414 2910 ntBASIC2.18□□□□□ -2.06
Sdc4O35988 Vmn2r-ps104-201ENSMUST00000099416 1671 ntTSL 5 BASIC2.18□□□□□ -2.06
Sdc4O35988 Gm42659-201ENSMUST00000196955 1754 ntBASIC2.18□□□□□ -2.06
Sdc4O35988 Olfr1477-202ENSMUST00000217001 4000 ntAPPRIS P1 TSL 2 BASIC2.18□□□□□ -2.06
Sdc4O35988 Olfr1025-ps1-202ENSMUST00000213474 3578 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
Sdc4O35988 Olfr1437-202ENSMUST00000207241 3751 ntAPPRIS P1 TSL 2 BASIC2.17□□□□□ -2.06
Sdc4O35988 Gm24715-201ENSMUST00000102377 95 ntBASIC2.17□□□□□ -2.06
Sdc4O35988 Rps15a-ps6-201ENSMUST00000117476 393 ntBASIC2.17□□□□□ -2.06
Sdc4O35988 Gm9432-201ENSMUST00000117810 759 ntBASIC2.17□□□□□ -2.06
Sdc4O35988 Gm15019-201ENSMUST00000120148 434 ntBASIC2.17□□□□□ -2.06
Sdc4O35988 Gm23885-201ENSMUST00000122682 294 ntBASIC2.17□□□□□ -2.06
Sdc4O35988 Vmn2r-ps114-201ENSMUST00000177016 1280 ntBASIC2.17□□□□□ -2.06
Sdc4O35988 Gm21865-201ENSMUST00000177713 498 ntTSL 5 BASIC2.17□□□□□ -2.06
Sdc4O35988 Gm29069-201ENSMUST00000185857 675 ntTSL 3 BASIC2.17□□□□□ -2.06
Sdc4O35988 Gm6060-201ENSMUST00000188671 251 ntBASIC2.17□□□□□ -2.06
Sdc4O35988 Gm35570-201ENSMUST00000198730 681 ntBASIC2.17□□□□□ -2.06
Sdc4O35988 Gm7675-201ENSMUST00000208828 686 ntBASIC2.17□□□□□ -2.06
Sdc4O35988 Olfr852-ps1-201ENSMUST00000212273 226 ntBASIC2.17□□□□□ -2.06
Sdc4O35988 Gm34113-201ENSMUST00000213796 388 ntTSL 2 BASIC2.17□□□□□ -2.06
Sdc4O35988 CAAA01090811.1-201ENSMUST00000216828 277 ntBASIC2.17□□□□□ -2.06
Sdc4O35988 AC147639.1-201ENSMUST00000224216 661 ntBASIC2.17□□□□□ -2.06
Sdc4O35988 AC090496.1-201ENSMUST00000226020 260 ntBASIC2.17□□□□□ -2.06
Sdc4O35988 Olfr850-201ENSMUST00000077347 948 ntAPPRIS P2 BASIC2.17□□□□□ -2.06
Sdc4O35988 Zfp37-202ENSMUST00000129511 1691 ntTSL 5 BASIC2.17□□□□□ -2.06
Sdc4O35988 Cyp3a59-201ENSMUST00000035571 1990 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
Sdc4O35988 Gm42967-201ENSMUST00000198647 2312 ntBASIC2.17□□□□□ -2.06
Sdc4O35988 AC153967.1-201ENSMUST00000219333 3190 ntBASIC2.16□□□□□ -2.06
Sdc4O35988 Olfr803-202ENSMUST00000204641 2385 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
Sdc4O35988 Olfr352-202ENSMUST00000217325 3337 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
Sdc4O35988 Gm609-201ENSMUST00000114585 2122 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
Sdc4O35988 Gm15108-201ENSMUST00000116160 803 ntBASIC2.16□□□□□ -2.06
Sdc4O35988 Gm15111-201ENSMUST00000122142 878 ntBASIC2.16□□□□□ -2.06
Sdc4O35988 Gm22208-201ENSMUST00000122658 110 ntBASIC2.16□□□□□ -2.06
Sdc4O35988 4930515L19Rik-201ENSMUST00000152352 769 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
Sdc4O35988 Gm23467-201ENSMUST00000157127 159 ntBASIC2.16□□□□□ -2.06
Sdc4O35988 Gm25902-201ENSMUST00000158493 318 ntBASIC2.16□□□□□ -2.06
Sdc4O35988 Agmo-205ENSMUST00000160768 741 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
Sdc4O35988 Gm5929-201ENSMUST00000166883 487 ntBASIC2.16□□□□□ -2.06
Sdc4O35988 Gm20513-201ENSMUST00000174074 537 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
Sdc4O35988 Gm8676-201ENSMUST00000184206 637 ntBASIC2.16□□□□□ -2.06
Sdc4O35988 Gm37219-201ENSMUST00000192036 926 ntBASIC2.16□□□□□ -2.06
Sdc4O35988 Gm18985-201ENSMUST00000196472 1079 ntBASIC2.16□□□□□ -2.06
Sdc4O35988 Gm43619-201ENSMUST00000197267 914 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
Sdc4O35988 Gm29815-201ENSMUST00000202418 178 ntBASIC2.16□□□□□ -2.06
Sdc4O35988 Olfr499-ps1-201ENSMUST00000208811 930 ntBASIC2.16□□□□□ -2.06
Sdc4O35988 9430099M06Rik-201ENSMUST00000210409 742 ntBASIC2.16□□□□□ -2.06
Sdc4O35988 Olfr274-ps1-201ENSMUST00000216601 595 ntBASIC2.16□□□□□ -2.06
Sdc4O35988 CT486006.1-201ENSMUST00000216797 227 ntTSL 5 BASIC2.16□□□□□ -2.06
Sdc4O35988 AC140210.1-201ENSMUST00000224961 534 ntBASIC2.16□□□□□ -2.06
Sdc4O35988 Olfr381-201ENSMUST00000078358 936 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
Sdc4O35988 Olfr727-201ENSMUST00000079142 1035 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
Sdc4O35988 Vmn1r83-202ENSMUST00000226701 2788 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
Sdc4O35988 Vmn2r-ps100-201ENSMUST00000221238 1702 ntBASIC2.16□□□□□ -2.06
Sdc4O35988 Gpr174-207ENSMUST00000178838 4955 ntAPPRIS P1 TSL 2 BASIC2.16□□□□□ -2.06
Sdc4O35988 Gm43663-201ENSMUST00000198643 1505 ntBASIC2.16□□□□□ -2.06
Sdc4O35988 Gm23942-201ENSMUST00000101956 107 ntBASIC2.15□□□□□ -2.07
Sdc4O35988 Gm13728-201ENSMUST00000117471 400 ntBASIC2.15□□□□□ -2.07
Sdc4O35988 Gm15001-201ENSMUST00000117657 795 ntBASIC2.15□□□□□ -2.07
Sdc4O35988 Gm14986-201ENSMUST00000121262 1002 ntBASIC2.15□□□□□ -2.07
Sdc4O35988 Gm14903-201ENSMUST00000122435 537 ntBASIC2.15□□□□□ -2.07
Sdc4O35988 Gm23867-201ENSMUST00000122649 274 ntBASIC2.15□□□□□ -2.07
Sdc4O35988 Gm22011-201ENSMUST00000158790 123 ntBASIC2.15□□□□□ -2.07
Sdc4O35988 Gm15900-201ENSMUST00000161584 342 ntBASIC2.15□□□□□ -2.07
Sdc4O35988 Vmn1r-ps85-201ENSMUST00000173029 890 ntBASIC2.15□□□□□ -2.07
Sdc4O35988 Hmga1b-202ENSMUST00000178955 120 ntBASIC2.15□□□□□ -2.07
Sdc4O35988 Gm27155-201ENSMUST00000183716 898 ntBASIC2.15□□□□□ -2.07
Sdc4O35988 Gm28552-201ENSMUST00000190725 388 ntBASIC2.15□□□□□ -2.07
Sdc4O35988 Gm38127-201ENSMUST00000191978 468 ntTSL 5 BASIC2.15□□□□□ -2.07
Sdc4O35988 Gm43358-201ENSMUST00000199217 970 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
Sdc4O35988 Gm43131-201ENSMUST00000200042 969 ntTSL 5 BASIC2.15□□□□□ -2.07
Sdc4O35988 Gm37797-201ENSMUST00000212114 815 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 77.9 ms