Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Gm35101-201ENSMUST00000219218 243 ntTSL 5 BASIC3.17□□□□□ -1.9
Ccdc180J3QNE4 Olfr954-201ENSMUST00000080329 945 ntAPPRIS P2 BASIC3.17□□□□□ -1.9
Ccdc180J3QNE4 4930522H14Rik-201ENSMUST00000082306 849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
Ccdc180J3QNE4 Olfr1037-203ENSMUST00000216020 1359 ntAPPRIS P1 TSL 3 BASIC3.17□□□□□ -1.9
Ccdc180J3QNE4 Olfr785-201ENSMUST00000204402 2014 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Ccdc180J3QNE4 Gm11438-201ENSMUST00000121582 189 ntBASIC3.17□□□□□ -1.9
Ccdc180J3QNE4 Gm26001-201ENSMUST00000157989 103 ntBASIC3.17□□□□□ -1.9
Ccdc180J3QNE4 Gm24770-201ENSMUST00000158505 92 ntBASIC3.17□□□□□ -1.9
Ccdc180J3QNE4 Cfap54-204ENSMUST00000164979 945 ntTSL 5 BASIC3.17□□□□□ -1.9
Ccdc180J3QNE4 Gm20915-201ENSMUST00000191575 663 ntBASIC3.17□□□□□ -1.9
Ccdc180J3QNE4 Arl8b-202ENSMUST00000204483 695 ntTSL 3 BASIC3.17□□□□□ -1.9
Ccdc180J3QNE4 AC160550.3-201ENSMUST00000226818 400 ntBASIC3.17□□□□□ -1.9
Ccdc180J3QNE4 Olfr829-201ENSMUST00000058411 966 ntAPPRIS P2 BASIC3.17□□□□□ -1.9
Ccdc180J3QNE4 Gm15314-201ENSMUST00000120740 1887 ntBASIC3.16□□□□□ -1.9
Ccdc180J3QNE4 Gm12803-201ENSMUST00000118907 821 ntBASIC3.16□□□□□ -1.9
Ccdc180J3QNE4 Gm14588-201ENSMUST00000119895 172 ntBASIC3.16□□□□□ -1.9
Ccdc180J3QNE4 Gm15116-201ENSMUST00000122248 663 ntBASIC3.16□□□□□ -1.9
Ccdc180J3QNE4 Gm24546-201ENSMUST00000158652 102 ntBASIC3.16□□□□□ -1.9
Ccdc180J3QNE4 Gm28163-201ENSMUST00000187099 325 ntBASIC3.16□□□□□ -1.9
Ccdc180J3QNE4 Gm45380-201ENSMUST00000210465 315 ntBASIC3.16□□□□□ -1.9
Ccdc180J3QNE4 Gm20304-201ENSMUST00000218168 444 ntBASIC3.16□□□□□ -1.9
Ccdc180J3QNE4 Olfr914-201ENSMUST00000057755 951 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Ccdc180J3QNE4 Gm14986-201ENSMUST00000121262 1002 ntBASIC3.15□□□□□ -1.9
Ccdc180J3QNE4 Gm13024-201ENSMUST00000121756 718 ntBASIC3.15□□□□□ -1.9
Ccdc180J3QNE4 Prl2c5-204ENSMUST00000151144 623 ntTSL 2 BASIC3.15□□□□□ -1.9
Ccdc180J3QNE4 Gm43198-201ENSMUST00000200927 326 ntBASIC3.15□□□□□ -1.9
Ccdc180J3QNE4 Gm29884-201ENSMUST00000218403 453 ntBASIC3.15□□□□□ -1.9
Ccdc180J3QNE4 CT030238.4-201ENSMUST00000228579 801 ntBASIC3.15□□□□□ -1.9
Ccdc180J3QNE4 Mir320-201ENSMUST00000083594 82 ntBASIC3.15□□□□□ -1.9
Ccdc180J3QNE4 Gm15679-201ENSMUST00000161244 1936 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
Ccdc180J3QNE4 Gm14819-201ENSMUST00000101645 928 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Ccdc180J3QNE4 Scarna3b-201ENSMUST00000157533 139 ntBASIC3.14□□□□□ -1.91
Ccdc180J3QNE4 Gm8532-201ENSMUST00000179174 461 ntBASIC3.14□□□□□ -1.91
Ccdc180J3QNE4 Gm27326-201ENSMUST00000183504 95 ntBASIC3.14□□□□□ -1.91
Ccdc180J3QNE4 Mir7039-201ENSMUST00000183852 85 ntBASIC3.14□□□□□ -1.91
Ccdc180J3QNE4 Mir878-201ENSMUST00000104680 78 ntBASIC3.14□□□□□ -1.91
Ccdc180J3QNE4 Gm15148-201ENSMUST00000117602 156 ntBASIC3.14□□□□□ -1.91
Ccdc180J3QNE4 Gm15896-201ENSMUST00000118045 440 ntBASIC3.14□□□□□ -1.91
Ccdc180J3QNE4 4921527H02Rik-202ENSMUST00000196005 947 ntBASIC3.14□□□□□ -1.91
Ccdc180J3QNE4 Gm44431-201ENSMUST00000203500 413 ntBASIC3.14□□□□□ -1.91
Ccdc180J3QNE4 AC131743.3-201ENSMUST00000222099 662 ntBASIC3.14□□□□□ -1.91
Ccdc180J3QNE4 Tas2r114-201ENSMUST00000080619 930 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
Ccdc180J3QNE4 Gm25339-201ENSMUST00000157458 232 ntBASIC3.13□□□□□ -1.91
Ccdc180J3QNE4 Gm7909-201ENSMUST00000182688 614 ntBASIC3.13□□□□□ -1.91
Ccdc180J3QNE4 Gm21409-201ENSMUST00000186110 923 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
Ccdc180J3QNE4 Gm19261-201ENSMUST00000189628 539 ntTSL 2 BASIC3.13□□□□□ -1.91
Ccdc180J3QNE4 Gm45341-201ENSMUST00000210850 1104 ntTSL 5 BASIC3.13□□□□□ -1.91
Ccdc180J3QNE4 Olfr867-203ENSMUST00000216538 4617 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Ccdc180J3QNE4 Gm36994-201ENSMUST00000192941 492 ntBASIC3.12□□□□□ -1.91
Ccdc180J3QNE4 AC141895.1-201ENSMUST00000218141 273 ntBASIC3.11□□□□□ -1.91
Ccdc180J3QNE4 AC165146.1-201ENSMUST00000223777 900 ntBASIC3.11□□□□□ -1.91
Ccdc180J3QNE4 AC163646.2-201ENSMUST00000227962 141 ntBASIC3.11□□□□□ -1.91
Ccdc180J3QNE4 Mir30d-201ENSMUST00000083503 82 ntBASIC3.11□□□□□ -1.91
Ccdc180J3QNE4 BC022960-201ENSMUST00000119987 1815 ntBASIC3.11□□□□□ -1.91
Ccdc180J3QNE4 1700061H18Rik-202ENSMUST00000147221 564 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
Ccdc180J3QNE4 Gm28383-201ENSMUST00000187563 139 ntBASIC3.11□□□□□ -1.91
Ccdc180J3QNE4 Gm29262-201ENSMUST00000190084 196 ntBASIC3.11□□□□□ -1.91
Ccdc180J3QNE4 Gm3081-201ENSMUST00000193413 3025 ntBASIC3.11□□□□□ -1.91
Ccdc180J3QNE4 Gm43193-201ENSMUST00000197732 441 ntBASIC3.11□□□□□ -1.91
Ccdc180J3QNE4 Gm13487-201ENSMUST00000122240 864 ntBASIC3.1□□□□□ -1.91
Ccdc180J3QNE4 Gm13424-201ENSMUST00000122301 354 ntBASIC3.1□□□□□ -1.91
Ccdc180J3QNE4 AC157017.1-201ENSMUST00000220148 364 ntBASIC3.1□□□□□ -1.91
Ccdc180J3QNE4 Gm2869-201ENSMUST00000124359 2621 ntBASIC3.09□□□□□ -1.91
Ccdc180J3QNE4 Olfr146-203ENSMUST00000214410 1651 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
Ccdc180J3QNE4 Olfr1218-203ENSMUST00000215048 3900 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
Ccdc180J3QNE4 AC117226.1-201ENSMUST00000221635 3737 ntBASIC3.09□□□□□ -1.91
Ccdc180J3QNE4 1700006A11Rik-201ENSMUST00000029598 2161 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
Ccdc180J3QNE4 Zfp953-201ENSMUST00000081582 4677 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
Ccdc180J3QNE4 Vmn2r74-201ENSMUST00000166355 2562 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.92
Ccdc180J3QNE4 Tcrg-C1-201ENSMUST00000103558 924 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
Ccdc180J3QNE4 Gm12386-201ENSMUST00000117380 688 ntBASIC3.08□□□□□ -1.92
Ccdc180J3QNE4 Gm12401-201ENSMUST00000118435 228 ntBASIC3.08□□□□□ -1.92
Ccdc180J3QNE4 Gm14841-201ENSMUST00000121067 758 ntBASIC3.08□□□□□ -1.92
Ccdc180J3QNE4 Gm13210-201ENSMUST00000121483 273 ntBASIC3.08□□□□□ -1.92
Ccdc180J3QNE4 Gm23267-201ENSMUST00000178490 132 ntBASIC3.08□□□□□ -1.92
Ccdc180J3QNE4 Gm45742-201ENSMUST00000212400 433 ntBASIC3.08□□□□□ -1.92
Ccdc180J3QNE4 AC171206.1-201ENSMUST00000213612 213 ntBASIC3.08□□□□□ -1.92
Ccdc180J3QNE4 AC121286.1-201ENSMUST00000218811 380 ntTSL 3 BASIC3.08□□□□□ -1.92
Ccdc180J3QNE4 Gm5670-201ENSMUST00000093546 372 ntBASIC3.08□□□□□ -1.92
Ccdc180J3QNE4 Vmn1r29-202ENSMUST00000226971 4714 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
Ccdc180J3QNE4 Olfr1431-202ENSMUST00000213759 3001 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Ccdc180J3QNE4 Gm9732-201ENSMUST00000111874 492 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
Ccdc180J3QNE4 Gm11268-201ENSMUST00000118347 267 ntBASIC3.08□□□□□ -1.92
Ccdc180J3QNE4 Gm24840-201ENSMUST00000122603 147 ntBASIC3.08□□□□□ -1.92
Ccdc180J3QNE4 Mir7217-201ENSMUST00000200304 62 ntBASIC3.08□□□□□ -1.92
Ccdc180J3QNE4 Gm20559-201ENSMUST00000201032 433 ntTSL 3 BASIC3.08□□□□□ -1.92
Ccdc180J3QNE4 AC174797.4-201ENSMUST00000225510 347 ntBASIC3.08□□□□□ -1.92
Ccdc180J3QNE4 AC158142.2-201ENSMUST00000227892 635 ntBASIC3.08□□□□□ -1.92
Ccdc180J3QNE4 Arhgap5-201ENSMUST00000110725 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
Ccdc180J3QNE4 AC159475.1-201ENSMUST00000216752 411 ntTSL 5 BASIC3.07□□□□□ -1.92
Ccdc180J3QNE4 Smim15-204ENSMUST00000224390 645 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
Ccdc180J3QNE4 AC154506.1-201ENSMUST00000225178 621 ntBASIC3.07□□□□□ -1.92
Ccdc180J3QNE4 Snord14d-201ENSMUST00000083424 86 ntBASIC3.07□□□□□ -1.92
Ccdc180J3QNE4 Prl8a2-202ENSMUST00000110363 922 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
Ccdc180J3QNE4 Gm14659-201ENSMUST00000117667 843 ntBASIC3.06□□□□□ -1.92
Ccdc180J3QNE4 Ptges3-ps-201ENSMUST00000160012 480 ntBASIC3.06□□□□□ -1.92
Ccdc180J3QNE4 Gm7247-201ENSMUST00000162998 1157 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
Ccdc180J3QNE4 Gm28494-201ENSMUST00000187687 562 ntTSL 5 BASIC3.06□□□□□ -1.92
Ccdc180J3QNE4 Gm37768-201ENSMUST00000192748 887 ntTSL 3 BASIC3.06□□□□□ -1.92
Ccdc180J3QNE4 Gm44555-201ENSMUST00000209008 148 ntBASIC3.06□□□□□ -1.92
Retrieved 100 of 76,532 protein–RNA pairs in 68.3 ms