Protein–RNA interactions for Protein: G3X8Y1

Trim55, MCG19772, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55G3X8Y1 Mir1946b-201ENSMUST00000157853 133 ntBASIC4.43□□□□□ -1.7
Trim55G3X8Y1 Gm16213-201ENSMUST00000160076 639 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Trim55G3X8Y1 Vmn2r-ps59-201ENSMUST00000174596 135 ntBASIC4.43□□□□□ -1.7
Trim55G3X8Y1 Gm15099-201ENSMUST00000179833 573 ntTSL 5 BASIC4.43□□□□□ -1.7
Trim55G3X8Y1 Gm27952-201ENSMUST00000184748 105 ntBASIC4.43□□□□□ -1.7
Trim55G3X8Y1 Gm27608-201ENSMUST00000184822 162 ntBASIC4.43□□□□□ -1.7
Trim55G3X8Y1 Gm28951-201ENSMUST00000190742 313 ntBASIC4.43□□□□□ -1.7
Trim55G3X8Y1 Gm28822-201ENSMUST00000191140 778 ntTSL 5 BASIC4.43□□□□□ -1.7
Trim55G3X8Y1 Gm28271-201ENSMUST00000191369 351 ntTSL 3 BASIC4.43□□□□□ -1.7
Trim55G3X8Y1 Gm44012-201ENSMUST00000204154 424 ntTSL 3 BASIC4.43□□□□□ -1.7
Trim55G3X8Y1 Gm44858-201ENSMUST00000207360 154 ntBASIC4.43□□□□□ -1.7
Trim55G3X8Y1 Gm45523-201ENSMUST00000210712 799 ntBASIC4.43□□□□□ -1.7
Trim55G3X8Y1 Gm45600-201ENSMUST00000210828 234 ntTSL 5 BASIC4.43□□□□□ -1.7
Trim55G3X8Y1 AC159619.1-201ENSMUST00000219118 318 ntTSL 5 BASIC4.43□□□□□ -1.7
Trim55G3X8Y1 AC124729.1-201ENSMUST00000225327 976 ntBASIC4.43□□□□□ -1.7
Trim55G3X8Y1 AC154276.2-201ENSMUST00000227707 309 ntBASIC4.43□□□□□ -1.7
Trim55G3X8Y1 Dynap-201ENSMUST00000025390 1227 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Trim55G3X8Y1 Olfr348-201ENSMUST00000056865 942 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Trim55G3X8Y1 Gm23510-201ENSMUST00000083083 163 ntBASIC4.43□□□□□ -1.7
Trim55G3X8Y1 Mir21a-201ENSMUST00000083521 92 ntBASIC4.43□□□□□ -1.7
Trim55G3X8Y1 Gm14399-201ENSMUST00000099029 192 ntTSL 5 BASIC4.43□□□□□ -1.7
Trim55G3X8Y1 Olfr1002-201ENSMUST00000099920 957 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Trim55G3X8Y1 Gm15261-201ENSMUST00000136779 2763 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Trim55G3X8Y1 Olfr1341-203ENSMUST00000215117 4700 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Trim55G3X8Y1 Vmn1r71-205ENSMUST00000227940 4725 ntAPPRIS P2 BASIC4.43□□□□□ -1.7
Trim55G3X8Y1 Gm3526-201ENSMUST00000164544 1750 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Trim55G3X8Y1 4932414N04Rik-204ENSMUST00000128259 3645 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Trim55G3X8Y1 Gm18609-201ENSMUST00000203370 3601 ntBASIC4.42□□□□□ -1.7
Trim55G3X8Y1 Btbd35f23-201ENSMUST00000189190 1943 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
Trim55G3X8Y1 4930467E23Rik-201ENSMUST00000098909 2514 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Trim55G3X8Y1 Arrdc3-201ENSMUST00000099356 4101 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Trim55G3X8Y1 Gm45304-201ENSMUST00000210303 2828 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Trim55G3X8Y1 E430014B02Rik-201ENSMUST00000194215 3156 ntBASIC4.42□□□□□ -1.7
Trim55G3X8Y1 Vmn1r74-202ENSMUST00000228471 6608 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
Trim55G3X8Y1 Gm25418-201ENSMUST00000104214 129 ntBASIC4.42□□□□□ -1.7
Trim55G3X8Y1 Mir743b-201ENSMUST00000104751 77 ntBASIC4.42□□□□□ -1.7
Trim55G3X8Y1 Rps19-ps7-201ENSMUST00000116122 438 ntBASIC4.42□□□□□ -1.7
Trim55G3X8Y1 Rps10-ps3-201ENSMUST00000122317 500 ntBASIC4.42□□□□□ -1.7
Trim55G3X8Y1 Gm5353-201ENSMUST00000139800 793 ntBASIC4.42□□□□□ -1.7
Trim55G3X8Y1 Gm25967-201ENSMUST00000157168 147 ntBASIC4.42□□□□□ -1.7
Trim55G3X8Y1 Gm23585-201ENSMUST00000157656 102 ntBASIC4.42□□□□□ -1.7
Trim55G3X8Y1 Gm7953-201ENSMUST00000168278 469 ntBASIC4.42□□□□□ -1.7
Trim55G3X8Y1 Gm25534-201ENSMUST00000175365 125 ntBASIC4.42□□□□□ -1.7
Trim55G3X8Y1 Gm9022-202ENSMUST00000183285 483 ntBASIC4.42□□□□□ -1.7
Trim55G3X8Y1 Gm27551-201ENSMUST00000184258 77 ntBASIC4.42□□□□□ -1.7
Trim55G3X8Y1 Ly6e-215ENSMUST00000191436 1122 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Trim55G3X8Y1 Gm37601-201ENSMUST00000194922 394 ntBASIC4.42□□□□□ -1.7
Trim55G3X8Y1 Gm18551-201ENSMUST00000195594 642 ntBASIC4.42□□□□□ -1.7
Trim55G3X8Y1 Gm7041-201ENSMUST00000201227 524 ntBASIC4.42□□□□□ -1.7
Trim55G3X8Y1 Gm43039-201ENSMUST00000202883 963 ntBASIC4.42□□□□□ -1.7
Trim55G3X8Y1 Gm19252-201ENSMUST00000204705 305 ntBASIC4.42□□□□□ -1.7
Trim55G3X8Y1 Olfr677-202ENSMUST00000213204 3227 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Trim55G3X8Y1 Olfr747-204ENSMUST00000213238 1416 ntAPPRIS P1 TSL 3 BASIC4.42□□□□□ -1.7
Trim55G3X8Y1 AC102312.1-201ENSMUST00000217752 475 ntTSL 3 BASIC4.42□□□□□ -1.7
Trim55G3X8Y1 AC123064.1-201ENSMUST00000218950 406 ntBASIC4.42□□□□□ -1.7
Trim55G3X8Y1 AC153361.1-201ENSMUST00000219679 247 ntBASIC4.42□□□□□ -1.7
Trim55G3X8Y1 AC129219.3-201ENSMUST00000223790 196 ntBASIC4.42□□□□□ -1.7
Trim55G3X8Y1 AC137961.1-201ENSMUST00000227924 734 ntBASIC4.42□□□□□ -1.7
Trim55G3X8Y1 Gm25937-201ENSMUST00000083912 107 ntBASIC4.42□□□□□ -1.7
Trim55G3X8Y1 Gm6639-202ENSMUST00000196841 2666 ntTSL 5 BASIC4.42□□□□□ -1.7
Trim55G3X8Y1 Cd180-201ENSMUST00000022124 2650 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Trim55G3X8Y1 Olfr1253-202ENSMUST00000213484 4812 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Trim55G3X8Y1 Gm43197-201ENSMUST00000201493 2583 ntBASIC4.42□□□□□ -1.7
Trim55G3X8Y1 Gm43871-201ENSMUST00000204931 1955 ntBASIC4.42□□□□□ -1.7
Trim55G3X8Y1 Svs2-201ENSMUST00000044953 1695 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Trim55G3X8Y1 Olfr502-202ENSMUST00000216919 3282 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Trim55G3X8Y1 Gm4788-201ENSMUST00000027612 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
Trim55G3X8Y1 Gm44821-201ENSMUST00000208212 2002 ntBASIC4.41□□□□□ -1.7
Trim55G3X8Y1 Syne2-210ENSMUST00000143031 21704 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
Trim55G3X8Y1 Olfr125-202ENSMUST00000213857 3835 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Trim55G3X8Y1 Gm13630-201ENSMUST00000127849 3650 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Trim55G3X8Y1 Znf41-ps-201ENSMUST00000122051 2413 ntBASIC4.41□□□□□ -1.7
Trim55G3X8Y1 Cntn6-205ENSMUST00000162872 3467 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Trim55G3X8Y1 Igkv9-129-201ENSMUST00000103308 350 ntAPPRIS ALT2 BASIC4.41□□□□□ -1.7
Trim55G3X8Y1 Gm7327-201ENSMUST00000120925 652 ntBASIC4.41□□□□□ -1.7
Trim55G3X8Y1 2210408F21Rik-202ENSMUST00000124811 384 ntTSL 2 BASIC4.41□□□□□ -1.7
Trim55G3X8Y1 Gm13775-201ENSMUST00000153865 751 ntTSL 3 BASIC4.41□□□□□ -1.7
Trim55G3X8Y1 Gm24191-201ENSMUST00000157977 122 ntBASIC4.41□□□□□ -1.7
Trim55G3X8Y1 Gm23700-201ENSMUST00000158842 102 ntBASIC4.41□□□□□ -1.7
Trim55G3X8Y1 Mir5624-201ENSMUST00000176635 61 ntBASIC4.41□□□□□ -1.7
Trim55G3X8Y1 Gm6214-201ENSMUST00000178845 541 ntBASIC4.41□□□□□ -1.7
Trim55G3X8Y1 Mir6338-201ENSMUST00000183389 109 ntBASIC4.41□□□□□ -1.7
Trim55G3X8Y1 Mir7028-201ENSMUST00000185016 64 ntBASIC4.41□□□□□ -1.7
Trim55G3X8Y1 Gm29218-205ENSMUST00000190846 615 ntBASIC4.41□□□□□ -1.7
Trim55G3X8Y1 Gm29192-201ENSMUST00000190942 377 ntBASIC4.41□□□□□ -1.7
Trim55G3X8Y1 Gm38127-201ENSMUST00000191978 468 ntTSL 5 BASIC4.41□□□□□ -1.7
Trim55G3X8Y1 Gm37636-201ENSMUST00000193583 359 ntBASIC4.41□□□□□ -1.7
Trim55G3X8Y1 Ighv1-21-1-201ENSMUST00000195790 351 ntBASIC4.41□□□□□ -1.7
Trim55G3X8Y1 Gm45119-201ENSMUST00000207612 199 ntBASIC4.41□□□□□ -1.7
Trim55G3X8Y1 B130024G19Rik-205ENSMUST00000207952 485 ntTSL 3 BASIC4.41□□□□□ -1.7
Trim55G3X8Y1 Olfr792-202ENSMUST00000215436 2113 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Trim55G3X8Y1 AC159475.1-201ENSMUST00000216752 411 ntTSL 5 BASIC4.41□□□□□ -1.7
Trim55G3X8Y1 Selenok-ps6-201ENSMUST00000221812 283 ntBASIC4.41□□□□□ -1.7
Trim55G3X8Y1 AC125311.1-201ENSMUST00000226950 220 ntBASIC4.41□□□□□ -1.7
Trim55G3X8Y1 Gm23626-201ENSMUST00000082458 133 ntBASIC4.41□□□□□ -1.7
Trim55G3X8Y1 Gm25581-201ENSMUST00000083410 164 ntBASIC4.41□□□□□ -1.7
Trim55G3X8Y1 Cp-204ENSMUST00000108328 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
Trim55G3X8Y1 Gm26814-201ENSMUST00000181178 4149 ntBASIC4.41□□□□□ -1.7
Trim55G3X8Y1 Adgrg2-201ENSMUST00000112398 3418 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
Trim55G3X8Y1 Erbin-205ENSMUST00000188997 5084 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 90.1 ms