Protein–RNA interactions for Protein: E9PXC0

Srp54b, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54bE9PXC0 Tug1-201ENSMUST00000132077 6719 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
Srp54bE9PXC0 Olfr389-202ENSMUST00000124927 2781 ntAPPRIS P1 TSL 3 BASIC3.17□□□□□ -1.9
Srp54bE9PXC0 Gm14288-201ENSMUST00000109020 3438 ntAPPRIS P2 TSL 1 (best) BASIC3.16□□□□□ -1.9
Srp54bE9PXC0 Gm45262-201ENSMUST00000209917 1463 ntBASIC3.16□□□□□ -1.9
Srp54bE9PXC0 Gm9696-201ENSMUST00000094227 3050 ntTSL 2 BASIC3.16□□□□□ -1.9
Srp54bE9PXC0 Gm14442-201ENSMUST00000119690 1736 ntBASIC3.16□□□□□ -1.9
Srp54bE9PXC0 Olfr729-203ENSMUST00000215327 4220 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Srp54bE9PXC0 Olfr729-204ENSMUST00000215451 4236 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Srp54bE9PXC0 Zfp273-203ENSMUST00000181391 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Srp54bE9PXC0 Olfr799-202ENSMUST00000213820 1627 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Srp54bE9PXC0 Gm25376-201ENSMUST00000104340 133 ntBASIC3.16□□□□□ -1.9
Srp54bE9PXC0 Gm11009-201ENSMUST00000108961 417 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Srp54bE9PXC0 Gm15399-201ENSMUST00000118055 724 ntBASIC3.16□□□□□ -1.9
Srp54bE9PXC0 Gm12891-201ENSMUST00000119358 240 ntBASIC3.16□□□□□ -1.9
Srp54bE9PXC0 Mup-ps10-201ENSMUST00000119626 556 ntBASIC3.16□□□□□ -1.9
Srp54bE9PXC0 Gm13751-201ENSMUST00000120280 752 ntBASIC3.16□□□□□ -1.9
Srp54bE9PXC0 Gm15700-201ENSMUST00000139791 821 ntTSL 3 BASIC3.16□□□□□ -1.9
Srp54bE9PXC0 Gm2020-201ENSMUST00000145242 579 ntBASIC3.16□□□□□ -1.9
Srp54bE9PXC0 4933406D12Rik-201ENSMUST00000147212 737 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
Srp54bE9PXC0 Gm13853-201ENSMUST00000155496 557 ntTSL 3 BASIC3.16□□□□□ -1.9
Srp54bE9PXC0 Gm23538-201ENSMUST00000157535 101 ntBASIC3.16□□□□□ -1.9
Srp54bE9PXC0 Gm16588-201ENSMUST00000162889 355 ntBASIC3.16□□□□□ -1.9
Srp54bE9PXC0 Vmn1r-ps24-201ENSMUST00000175772 900 ntBASIC3.16□□□□□ -1.9
Srp54bE9PXC0 Gm11168-201ENSMUST00000177722 684 ntAPPRIS P5 TSL 5 BASIC3.16□□□□□ -1.9
Srp54bE9PXC0 Gm11168-202ENSMUST00000178077 684 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
Srp54bE9PXC0 Gm29330-201ENSMUST00000190032 699 ntBASIC3.16□□□□□ -1.9
Srp54bE9PXC0 Gm28098-201ENSMUST00000191361 699 ntBASIC3.16□□□□□ -1.9
Srp54bE9PXC0 Gm45488-201ENSMUST00000210747 371 ntTSL 3 BASIC3.16□□□□□ -1.9
Srp54bE9PXC0 AC102312.1-201ENSMUST00000217752 475 ntTSL 3 BASIC3.16□□□□□ -1.9
Srp54bE9PXC0 4930567K20Rik-203ENSMUST00000220108 646 ntTSL 5 BASIC3.16□□□□□ -1.9
Srp54bE9PXC0 Olfr188-ps1-202ENSMUST00000220235 925 ntBASIC3.16□□□□□ -1.9
Srp54bE9PXC0 Gm29687-201ENSMUST00000223022 879 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
Srp54bE9PXC0 AC118639.1-204ENSMUST00000226401 694 ntBASIC3.16□□□□□ -1.9
Srp54bE9PXC0 AC160930.1-201ENSMUST00000227194 337 ntBASIC3.16□□□□□ -1.9
Srp54bE9PXC0 AC109172.2-201ENSMUST00000228792 381 ntBASIC3.16□□□□□ -1.9
Srp54bE9PXC0 Olfr1164-201ENSMUST00000099834 1112 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Srp54bE9PXC0 Vmn2r42-205ENSMUST00000146278 3086 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
Srp54bE9PXC0 1700017N19Rik-207ENSMUST00000190708 1945 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Srp54bE9PXC0 Olfr1461-202ENSMUST00000207113 3481 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
Srp54bE9PXC0 Ifi208-201ENSMUST00000085876 2990 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Srp54bE9PXC0 Krtap24-1-201ENSMUST00000052512 1571 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Srp54bE9PXC0 Gm37402-201ENSMUST00000194525 5000 ntBASIC3.15□□□□□ -1.9
Srp54bE9PXC0 Olfr862-202ENSMUST00000079660 2604 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
Srp54bE9PXC0 Gm14253-201ENSMUST00000122112 639 ntBASIC3.15□□□□□ -1.91
Srp54bE9PXC0 Gm5277-201ENSMUST00000164923 556 ntBASIC3.15□□□□□ -1.91
Srp54bE9PXC0 Mir3470b-201ENSMUST00000175563 126 ntBASIC3.15□□□□□ -1.91
Srp54bE9PXC0 Gm20612-201ENSMUST00000176318 236 ntBASIC3.15□□□□□ -1.91
Srp54bE9PXC0 Gm28745-201ENSMUST00000190069 305 ntBASIC3.15□□□□□ -1.91
Srp54bE9PXC0 Gm37892-201ENSMUST00000192018 437 ntTSL 3 BASIC3.15□□□□□ -1.91
Srp54bE9PXC0 Ighv1-17-1-201ENSMUST00000194849 351 ntBASIC3.15□□□□□ -1.91
Srp54bE9PXC0 Gm43109-201ENSMUST00000198269 753 ntTSL 3 BASIC3.15□□□□□ -1.91
Srp54bE9PXC0 Gm43026-201ENSMUST00000202972 325 ntBASIC3.15□□□□□ -1.91
Srp54bE9PXC0 Gm45513-201ENSMUST00000210228 376 ntBASIC3.15□□□□□ -1.91
Srp54bE9PXC0 Gm45438-201ENSMUST00000210242 564 ntBASIC3.15□□□□□ -1.91
Srp54bE9PXC0 Gm19137-201ENSMUST00000213790 1164 ntBASIC3.15□□□□□ -1.91
Srp54bE9PXC0 Gm34158-201ENSMUST00000216390 567 ntTSL 5 BASIC3.15□□□□□ -1.91
Srp54bE9PXC0 4930469K13Rik-202ENSMUST00000223852 537 ntAPPRIS P5 BASIC3.15□□□□□ -1.91
Srp54bE9PXC0 Mir463-201ENSMUST00000093570 75 ntBASIC3.15□□□□□ -1.91
Srp54bE9PXC0 Gm21032-201ENSMUST00000208108 2578 ntBASIC3.15□□□□□ -1.91
Srp54bE9PXC0 Vmn1r30-203ENSMUST00000227466 1798 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Srp54bE9PXC0 Gm44715-201ENSMUST00000209049 3839 ntBASIC3.14□□□□□ -1.91
Srp54bE9PXC0 Olfr104-ps-202ENSMUST00000215398 2771 ntAPPRIS P5 TSL 5 BASIC3.14□□□□□ -1.91
Srp54bE9PXC0 Gm43875-201ENSMUST00000203319 2475 ntBASIC3.14□□□□□ -1.91
Srp54bE9PXC0 Olfr1051-202ENSMUST00000216432 2807 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Srp54bE9PXC0 Olfr1051-203ENSMUST00000217245 2821 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Srp54bE9PXC0 Olfr1051-204ENSMUST00000217294 2840 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
Srp54bE9PXC0 Gm7237-201ENSMUST00000148435 1401 ntTSL 5 BASIC3.14□□□□□ -1.91
Srp54bE9PXC0 Gm7173-202ENSMUST00000114021 1083 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
Srp54bE9PXC0 Gm12044-201ENSMUST00000120335 213 ntBASIC3.14□□□□□ -1.91
Srp54bE9PXC0 Gm12858-201ENSMUST00000121913 208 ntBASIC3.14□□□□□ -1.91
Srp54bE9PXC0 Gm14578-201ENSMUST00000122166 391 ntBASIC3.14□□□□□ -1.91
Srp54bE9PXC0 Gm24720-201ENSMUST00000157518 166 ntBASIC3.14□□□□□ -1.91
Srp54bE9PXC0 Gm24534-201ENSMUST00000157949 291 ntBASIC3.14□□□□□ -1.91
Srp54bE9PXC0 Gm24190-201ENSMUST00000157976 216 ntBASIC3.14□□□□□ -1.91
Srp54bE9PXC0 Gm22765-201ENSMUST00000158371 128 ntBASIC3.14□□□□□ -1.91
Srp54bE9PXC0 Gm22766-201ENSMUST00000158372 99 ntBASIC3.14□□□□□ -1.91
Srp54bE9PXC0 Olfr180-201ENSMUST00000171656 1154 ntAPPRIS P2 TSL 2 BASIC3.14□□□□□ -1.91
Srp54bE9PXC0 Vmn1r-ps49-201ENSMUST00000177009 879 ntBASIC3.14□□□□□ -1.91
Srp54bE9PXC0 Gm8220-203ENSMUST00000177877 381 ntTSL 5 BASIC3.14□□□□□ -1.91
Srp54bE9PXC0 Mir6541-201ENSMUST00000183649 110 ntBASIC3.14□□□□□ -1.91
Srp54bE9PXC0 Gm28666-201ENSMUST00000186649 274 ntBASIC3.14□□□□□ -1.91
Srp54bE9PXC0 Igkv13-71-1-201ENSMUST00000199934 264 ntBASIC3.14□□□□□ -1.91
Srp54bE9PXC0 Gm43239-201ENSMUST00000200131 201 ntBASIC3.14□□□□□ -1.91
Srp54bE9PXC0 Gm44425-201ENSMUST00000203739 429 ntBASIC3.14□□□□□ -1.91
Srp54bE9PXC0 Gm44212-201ENSMUST00000205016 897 ntBASIC3.14□□□□□ -1.91
Srp54bE9PXC0 Gm44633-201ENSMUST00000205925 439 ntTSL 3 BASIC3.14□□□□□ -1.91
Srp54bE9PXC0 Gm4921-201ENSMUST00000219804 992 ntBASIC3.14□□□□□ -1.91
Srp54bE9PXC0 Gm33981-201ENSMUST00000219918 660 ntTSL 5 BASIC3.14□□□□□ -1.91
Srp54bE9PXC0 CT030254.2-201ENSMUST00000225902 502 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
Srp54bE9PXC0 AC117814.1-201ENSMUST00000226135 352 ntBASIC3.14□□□□□ -1.91
Srp54bE9PXC0 Vmn1r31-204ENSMUST00000226390 912 ntAPPRIS P2 BASIC3.14□□□□□ -1.91
Srp54bE9PXC0 Olfr198-201ENSMUST00000064452 1054 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
Srp54bE9PXC0 Gm23615-201ENSMUST00000082602 65 ntBASIC3.14□□□□□ -1.91
Srp54bE9PXC0 Gm23136-201ENSMUST00000083425 99 ntBASIC3.14□□□□□ -1.91
Srp54bE9PXC0 Smcp-201ENSMUST00000098888 861 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Srp54bE9PXC0 Olfr1168-202ENSMUST00000215996 2322 ntAPPRIS P1 TSL 3 BASIC3.14□□□□□ -1.91
Srp54bE9PXC0 Olfr597-202ENSMUST00000216456 2727 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
Srp54bE9PXC0 Wnk3-201ENSMUST00000096285 8551 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
Srp54bE9PXC0 Mir1198-201ENSMUST00000116995 121 ntBASIC3.13□□□□□ -1.91
Srp54bE9PXC0 Gm14751-201ENSMUST00000117693 222 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 87 ms