Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Gm25910-201ENSMUST00000157620 140 ntBASIC2.42□□□□□ -2.02
Scn1aA2APX8 Gm23223-201ENSMUST00000158119 127 ntBASIC2.42□□□□□ -2.02
Scn1aA2APX8 Vmn1r-ps62-201ENSMUST00000173275 910 ntBASIC2.42□□□□□ -2.02
Scn1aA2APX8 Vmn2r-ps76-201ENSMUST00000173876 739 ntBASIC2.42□□□□□ -2.02
Scn1aA2APX8 Gm35570-201ENSMUST00000198730 681 ntBASIC2.42□□□□□ -2.02
Scn1aA2APX8 Olfr496-ps1-201ENSMUST00000208862 915 ntBASIC2.42□□□□□ -2.02
Scn1aA2APX8 Gm44808-201ENSMUST00000208887 264 ntTSL 5 BASIC2.42□□□□□ -2.02
Scn1aA2APX8 AC164629.1-201ENSMUST00000220250 1113 ntBASIC2.42□□□□□ -2.02
Scn1aA2APX8 AC122484.1-201ENSMUST00000221578 177 ntBASIC2.42□□□□□ -2.02
Scn1aA2APX8 AC113031.2-201ENSMUST00000226132 579 ntBASIC2.42□□□□□ -2.02
Scn1aA2APX8 AC165415.1-201ENSMUST00000228924 273 ntBASIC2.42□□□□□ -2.02
Scn1aA2APX8 Gm10770-201ENSMUST00000099418 714 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
Scn1aA2APX8 Zfp971-202ENSMUST00000108926 1413 ntAPPRIS P1 TSL 3 BASIC2.42□□□□□ -2.02
Scn1aA2APX8 Olfr812-203ENSMUST00000205013 1718 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
Scn1aA2APX8 Vmn1r30-203ENSMUST00000227466 1798 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
Scn1aA2APX8 Gm14652-201ENSMUST00000118479 235 ntBASIC2.42□□□□□ -2.02
Scn1aA2APX8 Gm14167-201ENSMUST00000148705 433 ntTSL 3 BASIC2.42□□□□□ -2.02
Scn1aA2APX8 Tmem29-211ENSMUST00000163233 1256 ntTSL 2 BASIC2.42□□□□□ -2.02
Scn1aA2APX8 Vmn2r-ps77-201ENSMUST00000174505 320 ntBASIC2.42□□□□□ -2.02
Scn1aA2APX8 Gm37616-201ENSMUST00000193974 322 ntBASIC2.42□□□□□ -2.02
Scn1aA2APX8 Gm30341-201ENSMUST00000194363 289 ntBASIC2.42□□□□□ -2.02
Scn1aA2APX8 Igkv13-62-1-201ENSMUST00000198690 317 ntBASIC2.42□□□□□ -2.02
Scn1aA2APX8 Gm18268-201ENSMUST00000208445 943 ntBASIC2.42□□□□□ -2.02
Scn1aA2APX8 AC132384.9-201ENSMUST00000218085 277 ntBASIC2.42□□□□□ -2.02
Scn1aA2APX8 AC134596.2-201ENSMUST00000222158 171 ntBASIC2.42□□□□□ -2.02
Scn1aA2APX8 AC174797.4-201ENSMUST00000225510 347 ntBASIC2.42□□□□□ -2.02
Scn1aA2APX8 Olfr746-201ENSMUST00000080616 945 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
Scn1aA2APX8 Trdn-201ENSMUST00000095762 4514 ntAPPRIS P2 TSL 5 BASIC2.42□□□□□ -2.02
Scn1aA2APX8 Olfr1256-204ENSMUST00000215613 4543 ntAPPRIS P1 TSL 3 BASIC2.41□□□□□ -2.02
Scn1aA2APX8 Olfr1354-202ENSMUST00000204587 3781 ntAPPRIS P1 TSL 2 BASIC2.41□□□□□ -2.02
Scn1aA2APX8 Gm43439-201ENSMUST00000138710 322 ntTSL 3 BASIC2.41□□□□□ -2.02
Scn1aA2APX8 Gm13200-201ENSMUST00000138802 258 ntTSL 3 BASIC2.41□□□□□ -2.02
Scn1aA2APX8 Krtap27-1-201ENSMUST00000165580 646 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
Scn1aA2APX8 Gm8161-201ENSMUST00000168739 481 ntBASIC2.41□□□□□ -2.02
Scn1aA2APX8 Mup-ps7-201ENSMUST00000178292 545 ntBASIC2.41□□□□□ -2.02
Scn1aA2APX8 Mup-ps8-201ENSMUST00000178663 545 ntBASIC2.41□□□□□ -2.02
Scn1aA2APX8 Mup-ps9-201ENSMUST00000178847 545 ntBASIC2.41□□□□□ -2.02
Scn1aA2APX8 Mup-ps6-201ENSMUST00000179564 545 ntBASIC2.41□□□□□ -2.02
Scn1aA2APX8 Gm26870-202ENSMUST00000181572 1143 ntTSL 5 BASIC2.41□□□□□ -2.02
Scn1aA2APX8 Gm18667-201ENSMUST00000186523 484 ntBASIC2.41□□□□□ -2.02
Scn1aA2APX8 1700109G14Rik-203ENSMUST00000190737 801 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
Scn1aA2APX8 Fasl-202ENSMUST00000193648 406 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
Scn1aA2APX8 Gm43239-201ENSMUST00000200131 201 ntBASIC2.41□□□□□ -2.02
Scn1aA2APX8 Gm44212-201ENSMUST00000205016 897 ntBASIC2.41□□□□□ -2.02
Scn1aA2APX8 Gm20083-201ENSMUST00000205849 751 ntTSL 3 BASIC2.41□□□□□ -2.02
Scn1aA2APX8 Gm17911-201ENSMUST00000210806 877 ntBASIC2.41□□□□□ -2.02
Scn1aA2APX8 1700124M09Rik-201ENSMUST00000217047 305 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
Scn1aA2APX8 Gm46194-201ENSMUST00000218136 320 ntBASIC2.41□□□□□ -2.02
Scn1aA2APX8 CT030182.3-201ENSMUST00000225986 582 ntBASIC2.41□□□□□ -2.02
Scn1aA2APX8 AC090496.1-201ENSMUST00000226020 260 ntBASIC2.41□□□□□ -2.02
Scn1aA2APX8 Gm22806-201ENSMUST00000082738 136 ntBASIC2.41□□□□□ -2.02
Scn1aA2APX8 Gm10337-201ENSMUST00000096145 165 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
Scn1aA2APX8 Gm21286-201ENSMUST00000098035 545 ntBASIC2.41□□□□□ -2.02
Scn1aA2APX8 Zfp930-201ENSMUST00000110216 1323 ntTSL 5 BASIC2.41□□□□□ -2.02
Scn1aA2APX8 Olfr116-202ENSMUST00000216128 4477 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
Scn1aA2APX8 Olfr1185-ps1-201ENSMUST00000075025 3344 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
Scn1aA2APX8 Skint6-202ENSMUST00000171224 3723 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
Scn1aA2APX8 Gm14421-201ENSMUST00000121755 1958 ntBASIC2.41□□□□□ -2.02
Scn1aA2APX8 Gm14401-203ENSMUST00000108970 948 ntAPPRIS P1 TSL 3 BASIC2.41□□□□□ -2.02
Scn1aA2APX8 Prl3c1-202ENSMUST00000110364 850 ntAPPRIS ALT2 TSL 1 (best) BASIC2.41□□□□□ -2.02
Scn1aA2APX8 Gm13614-201ENSMUST00000117306 503 ntBASIC2.41□□□□□ -2.02
Scn1aA2APX8 Olfr1327-ps1-201ENSMUST00000117953 835 ntBASIC2.41□□□□□ -2.02
Scn1aA2APX8 Rpl23a-ps6-201ENSMUST00000119466 468 ntBASIC2.41□□□□□ -2.02
Scn1aA2APX8 Gm16100-201ENSMUST00000120489 231 ntBASIC2.41□□□□□ -2.02
Scn1aA2APX8 Gm13941-201ENSMUST00000127918 736 ntAPPRIS P1 TSL 3 BASIC2.41□□□□□ -2.02
Scn1aA2APX8 Gm25392-201ENSMUST00000157335 297 ntBASIC2.41□□□□□ -2.02
Scn1aA2APX8 Tmem167-ps3-201ENSMUST00000186718 178 ntBASIC2.41□□□□□ -2.02
Scn1aA2APX8 4933401J01Rik-201ENSMUST00000193812 1070 ntBASIC2.41□□□□□ -2.02
Scn1aA2APX8 2810432F15Rik-201ENSMUST00000198632 657 ntTSL 5 BASIC2.41□□□□□ -2.02
Scn1aA2APX8 Gm18602-201ENSMUST00000209794 851 ntBASIC2.41□□□□□ -2.02
Scn1aA2APX8 Vmn1r-ps50-201ENSMUST00000216908 453 ntBASIC2.41□□□□□ -2.02
Scn1aA2APX8 Gm25403-201ENSMUST00000082971 143 ntBASIC2.41□□□□□ -2.02
Scn1aA2APX8 Gm24928-201ENSMUST00000083399 107 ntBASIC2.41□□□□□ -2.02
Scn1aA2APX8 Gm25897-201ENSMUST00000083709 107 ntBASIC2.41□□□□□ -2.02
Scn1aA2APX8 A330044P14Rik-201ENSMUST00000176108 2706 ntTSL 1 (best) BASIC2.4□□□□□ -2.02
Scn1aA2APX8 Vmn2r68-201ENSMUST00000061074 2556 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.02
Scn1aA2APX8 6720427I07Rik-201ENSMUST00000181490 2300 ntBASIC2.4□□□□□ -2.02
Scn1aA2APX8 Gm32014-202ENSMUST00000215328 4168 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
Scn1aA2APX8 Gm13603-201ENSMUST00000119404 83 ntBASIC2.4□□□□□ -2.03
Scn1aA2APX8 Gm25807-201ENSMUST00000122783 305 ntBASIC2.4□□□□□ -2.03
Scn1aA2APX8 Gm16157-201ENSMUST00000124813 534 ntTSL 3 BASIC2.4□□□□□ -2.03
Scn1aA2APX8 Gm13194-201ENSMUST00000142299 311 ntBASIC2.4□□□□□ -2.03
Scn1aA2APX8 Gm16129-201ENSMUST00000152628 486 ntBASIC2.4□□□□□ -2.03
Scn1aA2APX8 Gm14707-201ENSMUST00000152793 398 ntTSL 5 BASIC2.4□□□□□ -2.03
Scn1aA2APX8 Vmn1r7-201ENSMUST00000176252 1219 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
Scn1aA2APX8 Gm21883-201ENSMUST00000179028 372 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
Scn1aA2APX8 Gm21789-201ENSMUST00000179547 372 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
Scn1aA2APX8 AC107663.3-201ENSMUST00000225873 601 ntBASIC2.4□□□□□ -2.03
Scn1aA2APX8 Scgb1b2-201ENSMUST00000080635 424 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
Scn1aA2APX8 Gm37387-201ENSMUST00000192201 1806 ntBASIC2.4□□□□□ -2.03
Scn1aA2APX8 Olfr1228-202ENSMUST00000215447 3223 ntAPPRIS ALT2 TSL 2 BASIC2.4□□□□□ -2.03
Scn1aA2APX8 Olfr801-203ENSMUST00000213294 4045 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
Scn1aA2APX8 Olfr421-ps1-201ENSMUST00000179386 1050 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
Scn1aA2APX8 Igkv12-49-201ENSMUST00000197714 278 ntBASIC2.39□□□□□ -2.03
Scn1aA2APX8 Gm42796-201ENSMUST00000199913 1087 ntBASIC2.39□□□□□ -2.03
Scn1aA2APX8 Gm18252-201ENSMUST00000214814 527 ntTSL 5 BASIC2.39□□□□□ -2.03
Scn1aA2APX8 Gm3333-202ENSMUST00000221763 1044 ntBASIC2.39□□□□□ -2.03
Scn1aA2APX8 AC133517.1-203ENSMUST00000225570 390 ntBASIC2.39□□□□□ -2.03
Scn1aA2APX8 CT025525.1-201ENSMUST00000226325 1054 ntBASIC2.39□□□□□ -2.03
Scn1aA2APX8 Klra7-201ENSMUST00000032286 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC2.39□□□□□ -2.03
Retrieved 100 of 76,532 protein–RNA pairs in 71.7 ms