Protein–RNA interactions for Protein: Q9Z0S7

Cldn9, Claudin-9, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn9Q9Z0S7 Gm27161-201ENSMUST00000183960 562 ntBASIC2.66□□□□□ -1.98
Cldn9Q9Z0S7 Gm29423-207ENSMUST00000189580 255 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
Cldn9Q9Z0S7 Gm19891-201ENSMUST00000189771 303 ntBASIC2.66□□□□□ -1.98
Cldn9Q9Z0S7 1700109G14Rik-203ENSMUST00000190737 801 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
Cldn9Q9Z0S7 Gm18956-201ENSMUST00000192857 480 ntBASIC2.66□□□□□ -1.98
Cldn9Q9Z0S7 Gm18748-201ENSMUST00000198507 622 ntBASIC2.66□□□□□ -1.98
Cldn9Q9Z0S7 CT573422.1-201ENSMUST00000216655 405 ntBASIC2.66□□□□□ -1.98
Cldn9Q9Z0S7 AC118639.1-201ENSMUST00000227204 338 ntBASIC2.66□□□□□ -1.98
Cldn9Q9Z0S7 Vmn1r75-201ENSMUST00000057229 918 ntAPPRIS P2 BASIC2.66□□□□□ -1.98
Cldn9Q9Z0S7 Gm26458-201ENSMUST00000082832 128 ntBASIC2.66□□□□□ -1.98
Cldn9Q9Z0S7 Olfr776-202ENSMUST00000213512 3499 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
Cldn9Q9Z0S7 Gm37387-201ENSMUST00000192201 1806 ntBASIC2.65□□□□□ -1.98
Cldn9Q9Z0S7 Vmn2r75-201ENSMUST00000167830 2562 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.98
Cldn9Q9Z0S7 Vmn1r76-203ENSMUST00000226947 8145 ntAPPRIS ALT2 BASIC2.65□□□□□ -1.98
Cldn9Q9Z0S7 Il23r-201ENSMUST00000118364 2488 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
Cldn9Q9Z0S7 Vmn1r3-201ENSMUST00000105159 1011 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
Cldn9Q9Z0S7 Zfp972-203ENSMUST00000108986 192 ntTSL 5 BASIC2.65□□□□□ -1.99
Cldn9Q9Z0S7 Gm13614-201ENSMUST00000117306 503 ntBASIC2.65□□□□□ -1.99
Cldn9Q9Z0S7 Gm14469-201ENSMUST00000118363 202 ntBASIC2.65□□□□□ -1.99
Cldn9Q9Z0S7 Vmn1r-ps1-201ENSMUST00000118738 573 ntBASIC2.65□□□□□ -1.99
Cldn9Q9Z0S7 Gm14669-201ENSMUST00000118841 250 ntBASIC2.65□□□□□ -1.99
Cldn9Q9Z0S7 Gm12156-201ENSMUST00000119188 554 ntBASIC2.65□□□□□ -1.99
Cldn9Q9Z0S7 Tpt1-ps1-201ENSMUST00000120257 436 ntBASIC2.65□□□□□ -1.99
Cldn9Q9Z0S7 Gm14804-201ENSMUST00000122322 508 ntBASIC2.65□□□□□ -1.99
Cldn9Q9Z0S7 Gm22026-201ENSMUST00000122735 281 ntBASIC2.65□□□□□ -1.99
Cldn9Q9Z0S7 Gm15561-201ENSMUST00000124326 540 ntTSL 3 BASIC2.65□□□□□ -1.99
Cldn9Q9Z0S7 Gm17555-201ENSMUST00000164042 1113 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
Cldn9Q9Z0S7 Pate1-201ENSMUST00000170021 389 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.99
Cldn9Q9Z0S7 Gm17166-201ENSMUST00000172006 431 ntBASIC2.65□□□□□ -1.99
Cldn9Q9Z0S7 Gm26960-201ENSMUST00000182263 412 ntBASIC2.65□□□□□ -1.99
Cldn9Q9Z0S7 Gm27007-201ENSMUST00000183264 279 ntTSL 3 BASIC2.65□□□□□ -1.99
Cldn9Q9Z0S7 Mir6905-201ENSMUST00000184228 70 ntBASIC2.65□□□□□ -1.99
Cldn9Q9Z0S7 Gm27786-201ENSMUST00000184337 70 ntBASIC2.65□□□□□ -1.99
Cldn9Q9Z0S7 Gm27330-201ENSMUST00000184689 132 ntBASIC2.65□□□□□ -1.99
Cldn9Q9Z0S7 Fam122c-203ENSMUST00000186314 898 ntAPPRIS P1 TSL 2 BASIC2.65□□□□□ -1.99
Cldn9Q9Z0S7 Gm38149-201ENSMUST00000191943 339 ntBASIC2.65□□□□□ -1.99
Cldn9Q9Z0S7 Gm38214-201ENSMUST00000192581 988 ntBASIC2.65□□□□□ -1.99
Cldn9Q9Z0S7 Gm37732-201ENSMUST00000194377 316 ntBASIC2.65□□□□□ -1.99
Cldn9Q9Z0S7 Gm37993-201ENSMUST00000195301 988 ntBASIC2.65□□□□□ -1.99
Cldn9Q9Z0S7 Gm43070-201ENSMUST00000196938 415 ntBASIC2.65□□□□□ -1.99
Cldn9Q9Z0S7 Gm44393-201ENSMUST00000197418 138 ntBASIC2.65□□□□□ -1.99
Cldn9Q9Z0S7 Gm45105-201ENSMUST00000207824 397 ntBASIC2.65□□□□□ -1.99
Cldn9Q9Z0S7 Gm45614-201ENSMUST00000209994 721 ntBASIC2.65□□□□□ -1.99
Cldn9Q9Z0S7 AC168266.1-201ENSMUST00000216024 226 ntBASIC2.65□□□□□ -1.99
Cldn9Q9Z0S7 Vmn1r-ps50-201ENSMUST00000216908 453 ntBASIC2.65□□□□□ -1.99
Cldn9Q9Z0S7 Olfr800-202ENSMUST00000217094 3831 ntAPPRIS P1 TSL 3 BASIC2.65□□□□□ -1.99
Cldn9Q9Z0S7 Gm4921-201ENSMUST00000219804 992 ntBASIC2.65□□□□□ -1.99
Cldn9Q9Z0S7 AC153924.1-201ENSMUST00000220117 312 ntBASIC2.65□□□□□ -1.99
Cldn9Q9Z0S7 Gm31849-201ENSMUST00000220306 375 ntBASIC2.65□□□□□ -1.99
Cldn9Q9Z0S7 AC154552.5-201ENSMUST00000222352 207 ntBASIC2.65□□□□□ -1.99
Cldn9Q9Z0S7 Efcab9-201ENSMUST00000054327 754 ntAPPRIS P2 TSL 1 (best) BASIC2.65□□□□□ -1.99
Cldn9Q9Z0S7 Gm24446-201ENSMUST00000083982 156 ntBASIC2.65□□□□□ -1.99
Cldn9Q9Z0S7 Gm5168-201ENSMUST00000089165 824 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
Cldn9Q9Z0S7 Vmn1r172-202ENSMUST00000173101 9109 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
Cldn9Q9Z0S7 Vmn1r185-211ENSMUST00000228467 6915 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
Cldn9Q9Z0S7 Zfp987-201ENSMUST00000091878 2798 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
Cldn9Q9Z0S7 Nexn-211ENSMUST00000199423 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC2.64□□□□□ -1.99
Cldn9Q9Z0S7 Vmn1r185-202ENSMUST00000226694 5656 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
Cldn9Q9Z0S7 Gm8935-201ENSMUST00000066794 2798 ntBASIC2.64□□□□□ -1.99
Cldn9Q9Z0S7 Gm38211-201ENSMUST00000192814 7217 ntBASIC2.64□□□□□ -1.99
Cldn9Q9Z0S7 Gm45104-201ENSMUST00000208748 4350 ntBASIC2.64□□□□□ -1.99
Cldn9Q9Z0S7 Traj44-201ENSMUST00000103698 61 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
Cldn9Q9Z0S7 Gm10999-201ENSMUST00000108743 207 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
Cldn9Q9Z0S7 Gm12706-201ENSMUST00000121588 698 ntBASIC2.64□□□□□ -1.99
Cldn9Q9Z0S7 Gm15986-201ENSMUST00000122153 400 ntBASIC2.64□□□□□ -1.99
Cldn9Q9Z0S7 DQ267100-201ENSMUST00000122600 72 ntBASIC2.64□□□□□ -1.99
Cldn9Q9Z0S7 Gm15397-201ENSMUST00000145790 804 ntTSL 3 BASIC2.64□□□□□ -1.99
Cldn9Q9Z0S7 Gm3298-201ENSMUST00000165289 516 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
Cldn9Q9Z0S7 Gm8206-202ENSMUST00000168733 516 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
Cldn9Q9Z0S7 Arpp19-211ENSMUST00000170310 899 ntTSL 3 BASIC2.64□□□□□ -1.99
Cldn9Q9Z0S7 Gm24111-201ENSMUST00000175491 97 ntBASIC2.64□□□□□ -1.99
Cldn9Q9Z0S7 Gm25470-201ENSMUST00000175576 111 ntBASIC2.64□□□□□ -1.99
Cldn9Q9Z0S7 Rpl31-ps7-201ENSMUST00000180629 379 ntBASIC2.64□□□□□ -1.99
Cldn9Q9Z0S7 Gm27599-201ENSMUST00000183758 174 ntBASIC2.64□□□□□ -1.99
Cldn9Q9Z0S7 Mir6405-201ENSMUST00000184584 124 ntBASIC2.64□□□□□ -1.99
Cldn9Q9Z0S7 Gm8739-201ENSMUST00000185962 181 ntTSL 5 BASIC2.64□□□□□ -1.99
Cldn9Q9Z0S7 Gm29051-201ENSMUST00000190184 369 ntTSL 5 BASIC2.64□□□□□ -1.99
Cldn9Q9Z0S7 Gm37281-201ENSMUST00000192412 439 ntBASIC2.64□□□□□ -1.99
Cldn9Q9Z0S7 Gm37768-201ENSMUST00000192748 887 ntTSL 3 BASIC2.64□□□□□ -1.99
Cldn9Q9Z0S7 Gm18551-201ENSMUST00000195594 642 ntBASIC2.64□□□□□ -1.99
Cldn9Q9Z0S7 Gm44072-201ENSMUST00000203666 383 ntTSL 3 BASIC2.64□□□□□ -1.99
Cldn9Q9Z0S7 Gm7675-201ENSMUST00000208828 686 ntBASIC2.64□□□□□ -1.99
Cldn9Q9Z0S7 AC138027.1-201ENSMUST00000218324 472 ntTSL 5 BASIC2.64□□□□□ -1.99
Cldn9Q9Z0S7 AC157017.2-201ENSMUST00000218354 777 ntBASIC2.64□□□□□ -1.99
Cldn9Q9Z0S7 CT010455.1-201ENSMUST00000218579 413 ntBASIC2.64□□□□□ -1.99
Cldn9Q9Z0S7 Olfr1324-203ENSMUST00000219631 1152 ntAPPRIS P2 BASIC2.64□□□□□ -1.99
Cldn9Q9Z0S7 AC140451.2-202ENSMUST00000226156 574 ntBASIC2.64□□□□□ -1.99
Cldn9Q9Z0S7 AC130477.2-201ENSMUST00000228158 274 ntBASIC2.64□□□□□ -1.99
Cldn9Q9Z0S7 Olfr1324-201ENSMUST00000050044 1152 ntAPPRIS ALT2 BASIC2.64□□□□□ -1.99
Cldn9Q9Z0S7 Gm10038-201ENSMUST00000077233 441 ntBASIC2.64□□□□□ -1.99
Cldn9Q9Z0S7 Gm43016-201ENSMUST00000196628 3150 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
Cldn9Q9Z0S7 Olfr1193-202ENSMUST00000213893 3519 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
Cldn9Q9Z0S7 Olfr166-202ENSMUST00000213531 4205 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
Cldn9Q9Z0S7 Olfr65-203ENSMUST00000214300 2855 ntAPPRIS ALT1 TSL 5 BASIC2.63□□□□□ -1.99
Cldn9Q9Z0S7 Olfr623-202ENSMUST00000213840 3980 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
Cldn9Q9Z0S7 Rps27-ps1-201ENSMUST00000118179 246 ntBASIC2.63□□□□□ -1.99
Cldn9Q9Z0S7 Gm11356-201ENSMUST00000118974 192 ntBASIC2.63□□□□□ -1.99
Cldn9Q9Z0S7 Gm14240-201ENSMUST00000120353 546 ntBASIC2.63□□□□□ -1.99
Cldn9Q9Z0S7 Gm13793-201ENSMUST00000124214 438 ntTSL 2 BASIC2.63□□□□□ -1.99
Cldn9Q9Z0S7 Gm8649-201ENSMUST00000181799 233 ntBASIC2.63□□□□□ -1.99
Retrieved 100 of 76,532 protein–RNA pairs in 77.1 ms