Protein–RNA interactions for Protein: Q9R1C7

Prpf40a, Pre-mRNA-processing factor 40 homolog A, mousemouse

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40aQ9R1C7 Gm38107-201ENSMUST00000194873 696 ntBASIC5.35□□□□□ -1.55
Prpf40aQ9R1C7 AC131720.3-201ENSMUST00000219113 275 ntBASIC5.35□□□□□ -1.55
Prpf40aQ9R1C7 4930567K20Rik-204ENSMUST00000220270 445 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Prpf40aQ9R1C7 Gm40477-202ENSMUST00000221505 881 ntTSL 3 BASIC5.35□□□□□ -1.55
Prpf40aQ9R1C7 AC158525.1-201ENSMUST00000223806 576 ntBASIC5.35□□□□□ -1.55
Prpf40aQ9R1C7 AC133598.4-202ENSMUST00000225267 469 ntBASIC5.35□□□□□ -1.55
Prpf40aQ9R1C7 Dynap-201ENSMUST00000025390 1227 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Prpf40aQ9R1C7 n-R5s3-201ENSMUST00000083879 112 ntBASIC5.35□□□□□ -1.55
Prpf40aQ9R1C7 Ptprd-217ENSMUST00000174023 4530 ntTSL 5 BASIC5.35□□□□□ -1.55
Prpf40aQ9R1C7 Gm14308-201ENSMUST00000108990 1628 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
Prpf40aQ9R1C7 Olfr1348-207ENSMUST00000209029 2696 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Prpf40aQ9R1C7 Zfp329-202ENSMUST00000108546 2577 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Prpf40aQ9R1C7 Scml2-203ENSMUST00000077375 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
Prpf40aQ9R1C7 Tbl1xr1-202ENSMUST00000192328 3323 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Prpf40aQ9R1C7 Brip1-201ENSMUST00000044423 6931 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Prpf40aQ9R1C7 Gm37174-201ENSMUST00000194699 3058 ntBASIC5.34□□□□□ -1.55
Prpf40aQ9R1C7 Olfr1217-203ENSMUST00000214022 3947 ntAPPRIS P1 TSL 3 BASIC5.34□□□□□ -1.55
Prpf40aQ9R1C7 n-R5s67-201ENSMUST00000104336 114 ntBASIC5.34□□□□□ -1.55
Prpf40aQ9R1C7 Hbb-bh2-201ENSMUST00000106866 558 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Prpf40aQ9R1C7 Gm15151-201ENSMUST00000117106 177 ntBASIC5.34□□□□□ -1.55
Prpf40aQ9R1C7 Gm14628-201ENSMUST00000117508 635 ntBASIC5.34□□□□□ -1.55
Prpf40aQ9R1C7 Rpl23a-ps6-201ENSMUST00000119466 468 ntBASIC5.34□□□□□ -1.55
Prpf40aQ9R1C7 Gm14581-201ENSMUST00000121726 198 ntBASIC5.34□□□□□ -1.55
Prpf40aQ9R1C7 Gm15986-201ENSMUST00000122153 400 ntBASIC5.34□□□□□ -1.55
Prpf40aQ9R1C7 Gm11381-201ENSMUST00000138574 420 ntTSL 5 BASIC5.34□□□□□ -1.55
Prpf40aQ9R1C7 Gm23902-201ENSMUST00000157571 134 ntBASIC5.34□□□□□ -1.55
Prpf40aQ9R1C7 Gm23700-201ENSMUST00000158842 102 ntBASIC5.34□□□□□ -1.55
Prpf40aQ9R1C7 Gm5168-202ENSMUST00000168002 636 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Prpf40aQ9R1C7 Mir5112-201ENSMUST00000174897 60 ntBASIC5.34□□□□□ -1.55
Prpf40aQ9R1C7 Gm27543-201ENSMUST00000183562 177 ntBASIC5.34□□□□□ -1.55
Prpf40aQ9R1C7 Mir6903-201ENSMUST00000183597 88 ntBASIC5.34□□□□□ -1.55
Prpf40aQ9R1C7 Mir7006-201ENSMUST00000183624 69 ntBASIC5.34□□□□□ -1.55
Prpf40aQ9R1C7 Gm30097-201ENSMUST00000193581 447 ntTSL 5 BASIC5.34□□□□□ -1.55
Prpf40aQ9R1C7 Gm42761-201ENSMUST00000201899 738 ntTSL 3 BASIC5.34□□□□□ -1.55
Prpf40aQ9R1C7 Gm44844-201ENSMUST00000207242 336 ntBASIC5.34□□□□□ -1.55
Prpf40aQ9R1C7 Gm44543-201ENSMUST00000209136 396 ntBASIC5.34□□□□□ -1.55
Prpf40aQ9R1C7 AC154626.1-201ENSMUST00000226070 311 ntBASIC5.34□□□□□ -1.55
Prpf40aQ9R1C7 Vmn1r39-206ENSMUST00000228651 2144 ntAPPRIS ALT2 BASIC5.34□□□□□ -1.55
Prpf40aQ9R1C7 Defa34-201ENSMUST00000075268 375 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
Prpf40aQ9R1C7 Olfr1459-201ENSMUST00000078299 1102 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Prpf40aQ9R1C7 Defa5-201ENSMUST00000098892 376 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Prpf40aQ9R1C7 BC003331-204ENSMUST00000097547 2851 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
Prpf40aQ9R1C7 Fastkd2-201ENSMUST00000027103 4486 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Prpf40aQ9R1C7 Cd44-202ENSMUST00000060516 3495 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
Prpf40aQ9R1C7 Gm42548-201ENSMUST00000202669 3933 ntBASIC5.34□□□□□ -1.56
Prpf40aQ9R1C7 Olfr481-202ENSMUST00000213601 5247 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.56
Prpf40aQ9R1C7 Vmn1r171-203ENSMUST00000226321 3067 ntAPPRIS ALT2 BASIC5.34□□□□□ -1.56
Prpf40aQ9R1C7 Slco1b2-201ENSMUST00000042812 3307 ntAPPRIS P2 TSL 1 (best) BASIC5.33□□□□□ -1.56
Prpf40aQ9R1C7 Macf1-205ENSMUST00000106220 17608 ntTSL 5 BASIC5.33□□□□□ -1.56
Prpf40aQ9R1C7 Vmn2r75-201ENSMUST00000167830 2562 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Prpf40aQ9R1C7 Gm43197-201ENSMUST00000201493 2583 ntBASIC5.33□□□□□ -1.56
Prpf40aQ9R1C7 Olfr747-204ENSMUST00000213238 1416 ntAPPRIS P1 TSL 3 BASIC5.33□□□□□ -1.56
Prpf40aQ9R1C7 AC139218.1-201ENSMUST00000228215 4287 ntBASIC5.33□□□□□ -1.56
Prpf40aQ9R1C7 Mlip-205ENSMUST00000183955 3069 ntAPPRIS P5 TSL 5 BASIC5.33□□□□□ -1.56
Prpf40aQ9R1C7 Trav6-7-dv9-201ENSMUST00000103638 379 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Prpf40aQ9R1C7 4930404H24Rik-201ENSMUST00000109783 331 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Prpf40aQ9R1C7 Gm15670-201ENSMUST00000117740 447 ntBASIC5.33□□□□□ -1.56
Prpf40aQ9R1C7 Gm11196-201ENSMUST00000119052 395 ntBASIC5.33□□□□□ -1.56
Prpf40aQ9R1C7 Gm24630-201ENSMUST00000122768 106 ntBASIC5.33□□□□□ -1.56
Prpf40aQ9R1C7 4933416E14Rik-201ENSMUST00000130841 491 ntBASIC5.33□□□□□ -1.56
Prpf40aQ9R1C7 A630050E04Rik-201ENSMUST00000151443 581 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Prpf40aQ9R1C7 Vmn1r-ps40-201ENSMUST00000172862 343 ntBASIC5.33□□□□□ -1.56
Prpf40aQ9R1C7 Mir3090-201ENSMUST00000175597 87 ntBASIC5.33□□□□□ -1.56
Prpf40aQ9R1C7 Gm26979-201ENSMUST00000182971 217 ntTSL 3 BASIC5.33□□□□□ -1.56
Prpf40aQ9R1C7 Ranbp2-ps5-201ENSMUST00000185141 379 ntBASIC5.33□□□□□ -1.56
Prpf40aQ9R1C7 Gm29218-205ENSMUST00000190846 615 ntBASIC5.33□□□□□ -1.56
Prpf40aQ9R1C7 Gm36259-201ENSMUST00000197340 392 ntBASIC5.33□□□□□ -1.56
Prpf40aQ9R1C7 Gm7652-201ENSMUST00000200440 1151 ntBASIC5.33□□□□□ -1.56
Prpf40aQ9R1C7 4930487D11Rik-201ENSMUST00000201983 295 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Prpf40aQ9R1C7 Gm44646-201ENSMUST00000205847 421 ntTSL 2 BASIC5.33□□□□□ -1.56
Prpf40aQ9R1C7 Gm44513-201ENSMUST00000206811 439 ntBASIC5.33□□□□□ -1.56
Prpf40aQ9R1C7 AC134537.2-201ENSMUST00000217770 575 ntBASIC5.33□□□□□ -1.56
Prpf40aQ9R1C7 Defb40-201ENSMUST00000066258 389 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Prpf40aQ9R1C7 4930512M02Rik-201ENSMUST00000081896 715 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Prpf40aQ9R1C7 Gm23796-201ENSMUST00000084011 160 ntBASIC5.33□□□□□ -1.56
Prpf40aQ9R1C7 Kynu-202ENSMUST00000050511 2778 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Prpf40aQ9R1C7 Gm45129-201ENSMUST00000208444 2224 ntBASIC5.33□□□□□ -1.56
Prpf40aQ9R1C7 Vmn2r-ps69-201ENSMUST00000173382 2565 ntBASIC5.33□□□□□ -1.56
Prpf40aQ9R1C7 Olfr1501-203ENSMUST00000215350 4395 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Prpf40aQ9R1C7 Nfatc3-202ENSMUST00000211991 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
Prpf40aQ9R1C7 AC149588.1-201ENSMUST00000228274 3745 ntBASIC5.33□□□□□ -1.56
Prpf40aQ9R1C7 Arrdc3-205ENSMUST00000161441 1908 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Prpf40aQ9R1C7 AC122382.2-201ENSMUST00000225128 3602 ntBASIC5.33□□□□□ -1.56
Prpf40aQ9R1C7 Vmn1r34-205ENSMUST00000227332 3075 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Prpf40aQ9R1C7 Ifi203-203ENSMUST00000123708 3482 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
Prpf40aQ9R1C7 Spink5-201ENSMUST00000069245 4785 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Prpf40aQ9R1C7 Olfr1535-202ENSMUST00000217519 3959 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Prpf40aQ9R1C7 B230206I08Rik-201ENSMUST00000207479 3191 ntBASIC5.32□□□□□ -1.56
Prpf40aQ9R1C7 Gm14512-201ENSMUST00000117924 230 ntBASIC5.32□□□□□ -1.56
Prpf40aQ9R1C7 Gm13173-201ENSMUST00000151703 441 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Prpf40aQ9R1C7 Gm23327-201ENSMUST00000157420 78 ntBASIC5.32□□□□□ -1.56
Prpf40aQ9R1C7 Gm24931-201ENSMUST00000158324 107 ntBASIC5.32□□□□□ -1.56
Prpf40aQ9R1C7 Gm20698-201ENSMUST00000175657 233 ntBASIC5.32□□□□□ -1.56
Prpf40aQ9R1C7 Gm28148-201ENSMUST00000186924 697 ntBASIC5.32□□□□□ -1.56
Prpf40aQ9R1C7 Gm42990-201ENSMUST00000199231 312 ntBASIC5.32□□□□□ -1.56
Prpf40aQ9R1C7 Gm44330-201ENSMUST00000200106 143 ntBASIC5.32□□□□□ -1.56
Prpf40aQ9R1C7 Gm44473-201ENSMUST00000204039 152 ntBASIC5.32□□□□□ -1.56
Prpf40aQ9R1C7 Gm5373-201ENSMUST00000212113 1050 ntBASIC5.32□□□□□ -1.56
Prpf40aQ9R1C7 AC158395.1-201ENSMUST00000227206 452 ntBASIC5.32□□□□□ -1.56
Prpf40aQ9R1C7 CT025525.4-201ENSMUST00000227728 277 ntBASIC5.32□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 80.9 ms