Protein–RNA interactions for Protein: Q9R053

Scn11a, Sodium channel protein type 11 subunit alpha, mousemouse

Predictions only

Length 1,765 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn11aQ9R053 Gm28060-201ENSMUST00000191554 189 ntBASIC2.35□□□□□ -2.03
Scn11aQ9R053 CT009696.2-201ENSMUST00000216668 432 ntBASIC2.35□□□□□ -2.03
Scn11aQ9R053 AC173345.1-201ENSMUST00000222837 306 ntTSL 5 BASIC2.35□□□□□ -2.03
Scn11aQ9R053 Mir448-201ENSMUST00000083516 112 ntBASIC2.35□□□□□ -2.03
Scn11aQ9R053 Olfr1256-204ENSMUST00000215613 4543 ntAPPRIS P1 TSL 3 BASIC2.35□□□□□ -2.03
Scn11aQ9R053 Vmn1r29-203ENSMUST00000227761 4671 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
Scn11aQ9R053 Vmn1r29-205ENSMUST00000228909 4658 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
Scn11aQ9R053 Gm44925-201ENSMUST00000208879 2110 ntBASIC2.34□□□□□ -2.03
Scn11aQ9R053 Gm44897-201ENSMUST00000206187 1341 ntBASIC2.34□□□□□ -2.03
Scn11aQ9R053 Olfr1448-203ENSMUST00000213713 4336 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
Scn11aQ9R053 Gm24096-201ENSMUST00000103905 110 ntBASIC2.34□□□□□ -2.03
Scn11aQ9R053 Gm22486-201ENSMUST00000116815 137 ntBASIC2.34□□□□□ -2.03
Scn11aQ9R053 Gm14559-201ENSMUST00000121745 496 ntBASIC2.34□□□□□ -2.03
Scn11aQ9R053 Gm15689-201ENSMUST00000160604 1159 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
Scn11aQ9R053 Mir7016-201ENSMUST00000184308 72 ntBASIC2.34□□□□□ -2.03
Scn11aQ9R053 Gm19457-201ENSMUST00000200995 448 ntBASIC2.34□□□□□ -2.03
Scn11aQ9R053 Gm2691-201ENSMUST00000203205 901 ntBASIC2.34□□□□□ -2.03
Scn11aQ9R053 AC153361.2-203ENSMUST00000218083 661 ntTSL 3 BASIC2.34□□□□□ -2.03
Scn11aQ9R053 Gm30239-202ENSMUST00000223193 631 ntTSL 5 BASIC2.34□□□□□ -2.03
Scn11aQ9R053 AC123658.1-201ENSMUST00000228364 867 ntBASIC2.34□□□□□ -2.03
Scn11aQ9R053 Olfr561-202ENSMUST00000213432 2498 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.04
Scn11aQ9R053 Gm37061-201ENSMUST00000195066 3243 ntBASIC2.34□□□□□ -2.04
Scn11aQ9R053 Rpl38-ps1-201ENSMUST00000117723 215 ntBASIC2.33□□□□□ -2.04
Scn11aQ9R053 Gm14930-201ENSMUST00000118864 652 ntBASIC2.33□□□□□ -2.04
Scn11aQ9R053 Gm27544-201ENSMUST00000185069 155 ntBASIC2.33□□□□□ -2.04
Scn11aQ9R053 Gm38080-201ENSMUST00000194035 268 ntBASIC2.33□□□□□ -2.04
Scn11aQ9R053 Gm43911-201ENSMUST00000203097 76 ntBASIC2.33□□□□□ -2.04
Scn11aQ9R053 Gm44533-201ENSMUST00000207782 268 ntBASIC2.33□□□□□ -2.04
Scn11aQ9R053 Olfr1013-201ENSMUST00000065626 918 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
Scn11aQ9R053 Gm23677-201ENSMUST00000083156 104 ntBASIC2.33□□□□□ -2.04
Scn11aQ9R053 Olfr394-202ENSMUST00000214284 5562 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
Scn11aQ9R053 Olfr1463-202ENSMUST00000207246 2315 ntAPPRIS P1 TSL 2 BASIC2.33□□□□□ -2.04
Scn11aQ9R053 Gm25888-201ENSMUST00000157778 302 ntBASIC2.33□□□□□ -2.04
Scn11aQ9R053 Gm20648-201ENSMUST00000175815 328 ntBASIC2.33□□□□□ -2.04
Scn11aQ9R053 Gm37692-201ENSMUST00000192633 232 ntBASIC2.33□□□□□ -2.04
Scn11aQ9R053 5430402E10Rik-201ENSMUST00000063127 798 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
Scn11aQ9R053 Olfr1201-203ENSMUST00000216213 2602 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
Scn11aQ9R053 Vmn2r-ps94-201ENSMUST00000116665 1456 ntBASIC2.32□□□□□ -2.04
Scn11aQ9R053 Olfr1458-202ENSMUST00000215160 1914 ntAPPRIS P5 TSL 5 BASIC2.32□□□□□ -2.04
Scn11aQ9R053 Gm12509-201ENSMUST00000118033 609 ntBASIC2.32□□□□□ -2.04
Scn11aQ9R053 Gm11582-201ENSMUST00000121041 236 ntBASIC2.32□□□□□ -2.04
Scn11aQ9R053 Gm14167-201ENSMUST00000148705 433 ntTSL 3 BASIC2.32□□□□□ -2.04
Scn11aQ9R053 Gm23467-201ENSMUST00000157127 159 ntBASIC2.32□□□□□ -2.04
Scn11aQ9R053 Gm22316-201ENSMUST00000158012 216 ntBASIC2.32□□□□□ -2.04
Scn11aQ9R053 Mir1927-201ENSMUST00000158579 109 ntBASIC2.32□□□□□ -2.04
Scn11aQ9R053 Cep41-210ENSMUST00000169422 438 ntTSL 3 BASIC2.32□□□□□ -2.04
Scn11aQ9R053 Mir7678-201ENSMUST00000185076 71 ntBASIC2.32□□□□□ -2.04
Scn11aQ9R053 Obox4-ps24-201ENSMUST00000197686 540 ntBASIC2.32□□□□□ -2.04
Scn11aQ9R053 Igkv13-80-1-201ENSMUST00000197926 255 ntBASIC2.32□□□□□ -2.04
Scn11aQ9R053 Gm43198-201ENSMUST00000200927 326 ntBASIC2.32□□□□□ -2.04
Scn11aQ9R053 Gm44011-201ENSMUST00000203336 394 ntBASIC2.32□□□□□ -2.04
Scn11aQ9R053 Gm6012-201ENSMUST00000210821 730 ntBASIC2.32□□□□□ -2.04
Scn11aQ9R053 AC102435.1-205ENSMUST00000221064 1097 ntTSL 5 BASIC2.32□□□□□ -2.04
Scn11aQ9R053 Olfr681-203ENSMUST00000215517 4324 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
Scn11aQ9R053 Mir878-201ENSMUST00000104680 78 ntBASIC2.31□□□□□ -2.04
Scn11aQ9R053 Gm26301-201ENSMUST00000104813 95 ntBASIC2.31□□□□□ -2.04
Scn11aQ9R053 Gm3055-201ENSMUST00000105316 720 ntTSL 5 BASIC2.31□□□□□ -2.04
Scn11aQ9R053 Cypt15-201ENSMUST00000115114 519 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
Scn11aQ9R053 Ear-ps12-201ENSMUST00000161720 451 ntBASIC2.31□□□□□ -2.04
Scn11aQ9R053 Mup-ps9-201ENSMUST00000178847 545 ntBASIC2.31□□□□□ -2.04
Scn11aQ9R053 Olfr1055-202ENSMUST00000188023 939 ntBASIC2.31□□□□□ -2.04
Scn11aQ9R053 Gm28744-201ENSMUST00000189939 340 ntBASIC2.31□□□□□ -2.04
Scn11aQ9R053 Gm38018-201ENSMUST00000195651 540 ntBASIC2.31□□□□□ -2.04
Scn11aQ9R053 Eif4e-205ENSMUST00000200100 729 ntTSL 3 BASIC2.31□□□□□ -2.04
Scn11aQ9R053 Gm44938-201ENSMUST00000208614 427 ntBASIC2.31□□□□□ -2.04
Scn11aQ9R053 AC122194.1-201ENSMUST00000220549 293 ntBASIC2.31□□□□□ -2.04
Scn11aQ9R053 AC239878.1-201ENSMUST00000224212 506 ntBASIC2.31□□□□□ -2.04
Scn11aQ9R053 AC117814.1-201ENSMUST00000226135 352 ntBASIC2.31□□□□□ -2.04
Scn11aQ9R053 4930447F04Rik-201ENSMUST00000033525 703 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
Scn11aQ9R053 Zfp781-201ENSMUST00000076281 732 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
Scn11aQ9R053 Spata45-201ENSMUST00000077889 432 ntAPPRIS P1 TSL 2 BASIC2.31□□□□□ -2.04
Scn11aQ9R053 Olfr199-202ENSMUST00000214186 2728 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
Scn11aQ9R053 Olfr805-204ENSMUST00000217219 3314 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
Scn11aQ9R053 Mir301b-201ENSMUST00000102333 97 ntBASIC2.31□□□□□ -2.04
Scn11aQ9R053 n-R5s191-201ENSMUST00000122724 116 ntBASIC2.31□□□□□ -2.04
Scn11aQ9R053 Gm15611-201ENSMUST00000146928 406 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
Scn11aQ9R053 Gm27271-201ENSMUST00000183509 170 ntBASIC2.31□□□□□ -2.04
Scn11aQ9R053 Gm27718-201ENSMUST00000183721 86 ntBASIC2.31□□□□□ -2.04
Scn11aQ9R053 Gm45445-201ENSMUST00000209586 232 ntBASIC2.31□□□□□ -2.04
Scn11aQ9R053 Olfr829-201ENSMUST00000058411 966 ntAPPRIS P2 BASIC2.31□□□□□ -2.04
Scn11aQ9R053 Ranbp2-201ENSMUST00000003310 9608 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
Scn11aQ9R053 Gm2869-201ENSMUST00000124359 2621 ntBASIC2.3□□□□□ -2.04
Scn11aQ9R053 Gm43718-201ENSMUST00000197524 1857 ntBASIC2.3□□□□□ -2.04
Scn11aQ9R053 Olfr1325-202ENSMUST00000216007 3617 ntAPPRIS ALT2 TSL 5 BASIC2.3□□□□□ -2.04
Scn11aQ9R053 Gm25728-201ENSMUST00000104525 159 ntBASIC2.3□□□□□ -2.04
Scn11aQ9R053 Gm24666-201ENSMUST00000158937 167 ntBASIC2.3□□□□□ -2.04
Scn11aQ9R053 Gm26652-202ENSMUST00000181672 475 ntBASIC2.3□□□□□ -2.04
Scn11aQ9R053 AC171204.1-201ENSMUST00000215867 975 ntTSL 5 BASIC2.3□□□□□ -2.04
Scn11aQ9R053 AC159263.3-201ENSMUST00000223434 460 ntBASIC2.3□□□□□ -2.04
Scn11aQ9R053 AC116656.1-201ENSMUST00000227040 755 ntBASIC2.3□□□□□ -2.04
Scn11aQ9R053 Spink11-201ENSMUST00000097587 746 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
Scn11aQ9R053 Vmn1r77-204ENSMUST00000228213 8094 ntAPPRIS ALT2 BASIC2.3□□□□□ -2.04
Scn11aQ9R053 Atp11c-205ENSMUST00000154051 6039 ntTSL 5 BASIC2.3□□□□□ -2.04
Scn11aQ9R053 Gm25979-201ENSMUST00000157177 138 ntBASIC2.29□□□□□ -2.04
Scn11aQ9R053 Vmn1r-ps148-201ENSMUST00000176775 455 ntBASIC2.29□□□□□ -2.04
Scn11aQ9R053 Mir7665-201ENSMUST00000184907 63 ntBASIC2.29□□□□□ -2.04
Scn11aQ9R053 Olfr717-ps1-201ENSMUST00000205589 556 ntBASIC2.29□□□□□ -2.04
Scn11aQ9R053 D730003K21Rik-201ENSMUST00000215052 589 ntTSL 2 BASIC2.29□□□□□ -2.04
Scn11aQ9R053 AC144671.1-201ENSMUST00000215265 99 ntBASIC2.29□□□□□ -2.04
Scn11aQ9R053 CT025619.4-201ENSMUST00000217362 350 ntTSL 2 BASIC2.29□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 78.2 ms