Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Gm25155-201ENSMUST00000178450 94 ntBASIC2.62□□□□□ -1.99
Trem1Q9JKE2 Gm24760-201ENSMUST00000178530 94 ntBASIC2.62□□□□□ -1.99
Trem1Q9JKE2 Gm22285-201ENSMUST00000178576 94 ntBASIC2.62□□□□□ -1.99
Trem1Q9JKE2 Gm22417-201ENSMUST00000178656 94 ntBASIC2.62□□□□□ -1.99
Trem1Q9JKE2 Snord116l2-201ENSMUST00000178675 94 ntBASIC2.62□□□□□ -1.99
Trem1Q9JKE2 Gm26270-201ENSMUST00000178690 94 ntBASIC2.62□□□□□ -1.99
Trem1Q9JKE2 Snord116l16-201ENSMUST00000178777 94 ntBASIC2.62□□□□□ -1.99
Trem1Q9JKE2 Gm23313-201ENSMUST00000178931 94 ntBASIC2.62□□□□□ -1.99
Trem1Q9JKE2 Snord116l17-201ENSMUST00000178936 94 ntBASIC2.62□□□□□ -1.99
Trem1Q9JKE2 Gm23089-201ENSMUST00000178947 94 ntBASIC2.62□□□□□ -1.99
Trem1Q9JKE2 Snord116l10-201ENSMUST00000179053 94 ntBASIC2.62□□□□□ -1.99
Trem1Q9JKE2 Gm24153-201ENSMUST00000179280 94 ntBASIC2.62□□□□□ -1.99
Trem1Q9JKE2 Gm25597-201ENSMUST00000179388 94 ntBASIC2.62□□□□□ -1.99
Trem1Q9JKE2 Snord116l1-201ENSMUST00000179518 94 ntBASIC2.62□□□□□ -1.99
Trem1Q9JKE2 Gm25816-201ENSMUST00000179764 94 ntBASIC2.62□□□□□ -1.99
Trem1Q9JKE2 Snord116l8-201ENSMUST00000179889 94 ntBASIC2.62□□□□□ -1.99
Trem1Q9JKE2 Snord116l7-201ENSMUST00000179895 94 ntBASIC2.62□□□□□ -1.99
Trem1Q9JKE2 Snord116l5-201ENSMUST00000179927 94 ntBASIC2.62□□□□□ -1.99
Trem1Q9JKE2 Snord116l6-201ENSMUST00000179955 94 ntBASIC2.62□□□□□ -1.99
Trem1Q9JKE2 Gm26188-201ENSMUST00000179963 94 ntBASIC2.62□□□□□ -1.99
Trem1Q9JKE2 Gm26433-201ENSMUST00000180227 94 ntBASIC2.62□□□□□ -1.99
Trem1Q9JKE2 Snord116l11-201ENSMUST00000180312 94 ntBASIC2.62□□□□□ -1.99
Trem1Q9JKE2 Gm22128-201ENSMUST00000180346 94 ntBASIC2.62□□□□□ -1.99
Trem1Q9JKE2 Mir3473f-201ENSMUST00000183743 136 ntBASIC2.62□□□□□ -1.99
Trem1Q9JKE2 Mir6385-201ENSMUST00000184295 105 ntBASIC2.62□□□□□ -1.99
Trem1Q9JKE2 1810007C17Rik-201ENSMUST00000187665 710 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
Trem1Q9JKE2 Gm19030-201ENSMUST00000194947 552 ntBASIC2.62□□□□□ -1.99
Trem1Q9JKE2 Gm43617-201ENSMUST00000196418 606 ntTSL 2 BASIC2.62□□□□□ -1.99
Trem1Q9JKE2 4930595L18Rik-201ENSMUST00000204069 506 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
Trem1Q9JKE2 AC105958.2-201ENSMUST00000214167 191 ntBASIC2.62□□□□□ -1.99
Trem1Q9JKE2 Gm7753-201ENSMUST00000221007 867 ntBASIC2.62□□□□□ -1.99
Trem1Q9JKE2 CT009764.1-201ENSMUST00000222260 483 ntBASIC2.62□□□□□ -1.99
Trem1Q9JKE2 AL731706.1-202ENSMUST00000226652 180 ntAPPRIS P5 BASIC2.62□□□□□ -1.99
Trem1Q9JKE2 Snord104-201ENSMUST00000083192 70 ntBASIC2.62□□□□□ -1.99
Trem1Q9JKE2 Gm23733-201ENSMUST00000083750 106 ntBASIC2.62□□□□□ -1.99
Trem1Q9JKE2 Gm10337-201ENSMUST00000096145 165 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
Trem1Q9JKE2 Olfr1025-ps1-202ENSMUST00000213474 3578 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
Trem1Q9JKE2 Tfpi-203ENSMUST00000111711 3968 ntTSL 5 BASIC2.62□□□□□ -1.99
Trem1Q9JKE2 C87414-206ENSMUST00000162964 2852 ntAPPRIS P2 TSL 1 (best) BASIC2.62□□□□□ -1.99
Trem1Q9JKE2 Zfp280c-203ENSMUST00000088898 4024 ntAPPRIS P3 TSL 1 (best) BASIC2.62□□□□□ -1.99
Trem1Q9JKE2 Olfr968-202ENSMUST00000216458 4630 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
Trem1Q9JKE2 Olfr1243-202ENSMUST00000144885 3148 ntAPPRIS P1 TSL 3 BASIC2.62□□□□□ -1.99
Trem1Q9JKE2 Gm37063-201ENSMUST00000194678 3520 ntBASIC2.62□□□□□ -1.99
Trem1Q9JKE2 Olfr1370-204ENSMUST00000215806 4322 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
Trem1Q9JKE2 Csn1s2b-202ENSMUST00000101057 1668 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
Trem1Q9JKE2 Slc7a12-202ENSMUST00000120484 1010 ntTSL 5 BASIC2.61□□□□□ -1.99
Trem1Q9JKE2 Gm26477-201ENSMUST00000122617 323 ntBASIC2.61□□□□□ -1.99
Trem1Q9JKE2 Gm12534-201ENSMUST00000147691 469 ntTSL 3 BASIC2.61□□□□□ -1.99
Trem1Q9JKE2 Gm24436-201ENSMUST00000157889 302 ntBASIC2.61□□□□□ -1.99
Trem1Q9JKE2 Gm17061-201ENSMUST00000163167 499 ntBASIC2.61□□□□□ -1.99
Trem1Q9JKE2 Ranbp2-ps8-201ENSMUST00000183723 345 ntBASIC2.61□□□□□ -1.99
Trem1Q9JKE2 Mir3620-201ENSMUST00000184710 61 ntBASIC2.61□□□□□ -1.99
Trem1Q9JKE2 Gm28755-201ENSMUST00000185773 199 ntBASIC2.61□□□□□ -1.99
Trem1Q9JKE2 Gm29641-201ENSMUST00000188955 259 ntBASIC2.61□□□□□ -1.99
Trem1Q9JKE2 Gm20776-201ENSMUST00000189940 700 ntBASIC2.61□□□□□ -1.99
Trem1Q9JKE2 Ighv3-7-201ENSMUST00000193370 348 ntBASIC2.61□□□□□ -1.99
Trem1Q9JKE2 Gm37495-201ENSMUST00000194590 264 ntBASIC2.61□□□□□ -1.99
Trem1Q9JKE2 Igkv9-128-201ENSMUST00000196602 353 ntBASIC2.61□□□□□ -1.99
Trem1Q9JKE2 Rpl36a-ps2-201ENSMUST00000197973 321 ntBASIC2.61□□□□□ -1.99
Trem1Q9JKE2 Gm42621-201ENSMUST00000198114 275 ntBASIC2.61□□□□□ -1.99
Trem1Q9JKE2 Gm17951-201ENSMUST00000198536 496 ntBASIC2.61□□□□□ -1.99
Trem1Q9JKE2 Gm40292-201ENSMUST00000202383 553 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
Trem1Q9JKE2 Gm44611-201ENSMUST00000207507 355 ntBASIC2.61□□□□□ -1.99
Trem1Q9JKE2 Olfr1464-ps1-201ENSMUST00000208760 923 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
Trem1Q9JKE2 Gm2059-201ENSMUST00000212025 287 ntBASIC2.61□□□□□ -1.99
Trem1Q9JKE2 AC115047.1-201ENSMUST00000213795 322 ntBASIC2.61□□□□□ -1.99
Trem1Q9JKE2 4930401A07Rik-201ENSMUST00000214657 746 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
Trem1Q9JKE2 Olfr652-202ENSMUST00000215410 4672 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
Trem1Q9JKE2 4930540M03Rik-201ENSMUST00000216952 437 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
Trem1Q9JKE2 AC153870.1-201ENSMUST00000219599 560 ntBASIC2.61□□□□□ -1.99
Trem1Q9JKE2 AC101984.1-201ENSMUST00000219639 402 ntBASIC2.61□□□□□ -1.99
Trem1Q9JKE2 AC122924.2-201ENSMUST00000220799 298 ntBASIC2.61□□□□□ -1.99
Trem1Q9JKE2 Gm3333-202ENSMUST00000221763 1044 ntBASIC2.61□□□□□ -1.99
Trem1Q9JKE2 AC154576.2-202ENSMUST00000223916 688 ntBASIC2.61□□□□□ -1.99
Trem1Q9JKE2 Olfr815-201ENSMUST00000071557 951 ntBASIC2.61□□□□□ -1.99
Trem1Q9JKE2 Vmn2r-ps69-201ENSMUST00000173382 2565 ntBASIC2.61□□□□□ -1.99
Trem1Q9JKE2 Vmn1r46-206ENSMUST00000228401 10955 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
Trem1Q9JKE2 Pak3-210ENSMUST00000172330 8135 ntAPPRIS P3 TSL 1 (best) BASIC2.61□□□□□ -1.99
Trem1Q9JKE2 AC154481.2-201ENSMUST00000222526 3175 ntBASIC2.61□□□□□ -1.99
Trem1Q9JKE2 AC152951.2-201ENSMUST00000218293 3587 ntBASIC2.6□□□□□ -1.99
Trem1Q9JKE2 Gm15097-202ENSMUST00000112741 1953 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
Trem1Q9JKE2 Gm7489-201ENSMUST00000100666 1222 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
Trem1Q9JKE2 Trav10-201ENSMUST00000103583 406 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
Trem1Q9JKE2 Gm22270-201ENSMUST00000104034 132 ntBASIC2.6□□□□□ -1.99
Trem1Q9JKE2 Snord66-201ENSMUST00000104051 75 ntBASIC2.6□□□□□ -1.99
Trem1Q9JKE2 Gm14931-201ENSMUST00000111079 253 ntBASIC2.6□□□□□ -1.99
Trem1Q9JKE2 Gm12427-201ENSMUST00000117719 302 ntBASIC2.6□□□□□ -1.99
Trem1Q9JKE2 Gm2003-201ENSMUST00000118537 636 ntBASIC2.6□□□□□ -1.99
Trem1Q9JKE2 Gm15060-201ENSMUST00000119550 948 ntBASIC2.6□□□□□ -1.99
Trem1Q9JKE2 Gm9440-201ENSMUST00000119667 539 ntBASIC2.6□□□□□ -1.99
Trem1Q9JKE2 Gm15103-201ENSMUST00000119893 871 ntBASIC2.6□□□□□ -1.99
Trem1Q9JKE2 Gm11384-201ENSMUST00000121376 303 ntBASIC2.6□□□□□ -1.99
Trem1Q9JKE2 Gm14736-201ENSMUST00000121470 336 ntBASIC2.6□□□□□ -1.99
Trem1Q9JKE2 Ppp1r2-ps7-201ENSMUST00000140102 609 ntBASIC2.6□□□□□ -1.99
Trem1Q9JKE2 Gm17538-201ENSMUST00000168236 327 ntBASIC2.6□□□□□ -1.99
Trem1Q9JKE2 Gm17162-201ENSMUST00000168538 473 ntBASIC2.6□□□□□ -1.99
Trem1Q9JKE2 Gm25476-201ENSMUST00000175125 185 ntBASIC2.6□□□□□ -1.99
Trem1Q9JKE2 Gm27428-201ENSMUST00000184289 110 ntBASIC2.6□□□□□ -1.99
Trem1Q9JKE2 Gm28702-201ENSMUST00000188276 253 ntTSL 5 BASIC2.6□□□□□ -1.99
Trem1Q9JKE2 Gm29183-201ENSMUST00000188600 790 ntTSL 5 BASIC2.6□□□□□ -1.99
Retrieved 100 of 76,532 protein–RNA pairs in 88.2 ms