Protein–RNA interactions for Protein: Q9ERP3

Trim54, Tripartite motif-containing protein 54, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54Q9ERP3 Mir3964-201ENSMUST00000174898 74 ntBASIC3.86□□□□□ -1.79
Trim54Q9ERP3 Naa60-211ENSMUST00000176625 876 ntTSL 2 BASIC3.86□□□□□ -1.79
Trim54Q9ERP3 Gm17946-201ENSMUST00000186856 538 ntBASIC3.86□□□□□ -1.79
Trim54Q9ERP3 Gm29545-201ENSMUST00000188878 694 ntBASIC3.86□□□□□ -1.79
Trim54Q9ERP3 4930449A18Rik-202ENSMUST00000192453 1200 ntBASIC3.86□□□□□ -1.79
Trim54Q9ERP3 Gm37692-201ENSMUST00000192633 232 ntBASIC3.86□□□□□ -1.79
Trim54Q9ERP3 Gm38332-201ENSMUST00000194189 147 ntBASIC3.86□□□□□ -1.79
Trim54Q9ERP3 Igkv20-101-2-201ENSMUST00000200406 339 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
Trim54Q9ERP3 Gm2676-201ENSMUST00000207279 606 ntBASIC3.86□□□□□ -1.79
Trim54Q9ERP3 Gm17989-201ENSMUST00000211543 412 ntBASIC3.86□□□□□ -1.79
Trim54Q9ERP3 Olfr944-202ENSMUST00000213908 1257 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
Trim54Q9ERP3 AC133076.1-201ENSMUST00000228074 484 ntBASIC3.86□□□□□ -1.79
Trim54Q9ERP3 Vmn1r184-201ENSMUST00000057123 945 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
Trim54Q9ERP3 Olfr357-201ENSMUST00000069578 1092 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
Trim54Q9ERP3 Olfr395-201ENSMUST00000072991 939 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
Trim54Q9ERP3 Tmsb15a-201ENSMUST00000073674 299 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
Trim54Q9ERP3 1700008P02Rik-201ENSMUST00000091364 783 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
Trim54Q9ERP3 Olfr681-201ENSMUST00000098157 948 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
Trim54Q9ERP3 Olfr583-201ENSMUST00000098211 960 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
Trim54Q9ERP3 AC161254.1-201ENSMUST00000220310 3842 ntBASIC3.86□□□□□ -1.79
Trim54Q9ERP3 Olfr912-201ENSMUST00000217160 5726 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
Trim54Q9ERP3 Olfr1144-ps1-201ENSMUST00000118227 328 ntBASIC3.85□□□□□ -1.79
Trim54Q9ERP3 Gm6568-201ENSMUST00000122274 697 ntBASIC3.85□□□□□ -1.79
Trim54Q9ERP3 Gm23206-201ENSMUST00000122720 184 ntBASIC3.85□□□□□ -1.79
Trim54Q9ERP3 Gm13943-201ENSMUST00000144043 343 ntTSL 5 BASIC3.85□□□□□ -1.79
Trim54Q9ERP3 1700120G11Rik-201ENSMUST00000150273 491 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
Trim54Q9ERP3 Gm24901-201ENSMUST00000158125 110 ntBASIC3.85□□□□□ -1.79
Trim54Q9ERP3 Gm24930-201ENSMUST00000158315 83 ntBASIC3.85□□□□□ -1.79
Trim54Q9ERP3 Gm22851-201ENSMUST00000178741 94 ntBASIC3.85□□□□□ -1.79
Trim54Q9ERP3 Gm25074-201ENSMUST00000178782 94 ntBASIC3.85□□□□□ -1.79
Trim54Q9ERP3 Gm6651-201ENSMUST00000189471 271 ntBASIC3.85□□□□□ -1.79
Trim54Q9ERP3 Gm29184-201ENSMUST00000190038 334 ntBASIC3.85□□□□□ -1.79
Trim54Q9ERP3 Gm28414-201ENSMUST00000190111 294 ntBASIC3.85□□□□□ -1.79
Trim54Q9ERP3 Igkv13-74-1-201ENSMUST00000200611 242 ntBASIC3.85□□□□□ -1.79
Trim54Q9ERP3 Gm17906-201ENSMUST00000202480 901 ntBASIC3.85□□□□□ -1.79
Trim54Q9ERP3 Gm44084-201ENSMUST00000203947 409 ntBASIC3.85□□□□□ -1.79
Trim54Q9ERP3 Gm44818-201ENSMUST00000206608 358 ntBASIC3.85□□□□□ -1.79
Trim54Q9ERP3 Gm36776-201ENSMUST00000207006 203 ntBASIC3.85□□□□□ -1.79
Trim54Q9ERP3 Gm44927-201ENSMUST00000207573 716 ntBASIC3.85□□□□□ -1.79
Trim54Q9ERP3 Gm18672-201ENSMUST00000208035 270 ntBASIC3.85□□□□□ -1.79
Trim54Q9ERP3 Gm45600-201ENSMUST00000210828 234 ntTSL 5 BASIC3.85□□□□□ -1.79
Trim54Q9ERP3 Nat1-202ENSMUST00000212171 1208 ntAPPRIS ALT1 TSL 5 BASIC3.85□□□□□ -1.79
Trim54Q9ERP3 Olfr966-ps1-201ENSMUST00000214875 577 ntBASIC3.85□□□□□ -1.79
Trim54Q9ERP3 AC160124.1-201ENSMUST00000215539 519 ntTSL 2 BASIC3.85□□□□□ -1.79
Trim54Q9ERP3 AC155830.1-201ENSMUST00000220050 3836 ntBASIC3.85□□□□□ -1.79
Trim54Q9ERP3 AC116589.1-201ENSMUST00000220634 327 ntBASIC3.85□□□□□ -1.79
Trim54Q9ERP3 Gm19441-201ENSMUST00000221545 330 ntBASIC3.85□□□□□ -1.79
Trim54Q9ERP3 CT010506.2-201ENSMUST00000225618 183 ntBASIC3.85□□□□□ -1.79
Trim54Q9ERP3 Sval3-201ENSMUST00000080742 550 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Trim54Q9ERP3 Gm14443-201ENSMUST00000109054 4516 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
Trim54Q9ERP3 Slc9c1-201ENSMUST00000159945 3836 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Trim54Q9ERP3 AC122840.2-201ENSMUST00000221030 2659 ntBASIC3.85□□□□□ -1.79
Trim54Q9ERP3 Gm42481-201ENSMUST00000196822 2178 ntBASIC3.85□□□□□ -1.79
Trim54Q9ERP3 Olfr1051-202ENSMUST00000216432 2807 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
Trim54Q9ERP3 Olfr1051-203ENSMUST00000217245 2821 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
Trim54Q9ERP3 Olfr1051-204ENSMUST00000217294 2840 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
Trim54Q9ERP3 Olfr235-205ENSMUST00000214638 3459 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
Trim54Q9ERP3 Gm8473-201ENSMUST00000176697 1885 ntBASIC3.84□□□□□ -1.79
Trim54Q9ERP3 Gm37006-201ENSMUST00000195253 2674 ntBASIC3.84□□□□□ -1.79
Trim54Q9ERP3 Gm38207-201ENSMUST00000193009 3505 ntBASIC3.84□□□□□ -1.79
Trim54Q9ERP3 Gm23609-201ENSMUST00000104542 127 ntBASIC3.84□□□□□ -1.79
Trim54Q9ERP3 Mir294-201ENSMUST00000104710 84 ntBASIC3.84□□□□□ -1.79
Trim54Q9ERP3 Rps15a-ps7-201ENSMUST00000117430 392 ntBASIC3.84□□□□□ -1.79
Trim54Q9ERP3 Gm13728-201ENSMUST00000117471 400 ntBASIC3.84□□□□□ -1.79
Trim54Q9ERP3 Gm14751-201ENSMUST00000117693 222 ntBASIC3.84□□□□□ -1.79
Trim54Q9ERP3 Gm14594-201ENSMUST00000118052 537 ntBASIC3.84□□□□□ -1.79
Trim54Q9ERP3 Gm14590-201ENSMUST00000118934 537 ntBASIC3.84□□□□□ -1.79
Trim54Q9ERP3 Gm13804-201ENSMUST00000119552 172 ntBASIC3.84□□□□□ -1.79
Trim54Q9ERP3 1700036O09Rik-201ENSMUST00000136834 349 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
Trim54Q9ERP3 Gm12505-201ENSMUST00000146041 757 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
Trim54Q9ERP3 Gm12534-201ENSMUST00000147691 469 ntTSL 3 BASIC3.84□□□□□ -1.79
Trim54Q9ERP3 Gm24739-201ENSMUST00000158855 292 ntBASIC3.84□□□□□ -1.79
Trim54Q9ERP3 Pcgf1-204ENSMUST00000176089 492 ntTSL 5 BASIC3.84□□□□□ -1.79
Trim54Q9ERP3 Rpl48-ps1-201ENSMUST00000177147 556 ntBASIC3.84□□□□□ -1.79
Trim54Q9ERP3 Gm8247-202ENSMUST00000178759 375 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.79
Trim54Q9ERP3 Gm25156-201ENSMUST00000179809 79 ntBASIC3.84□□□□□ -1.79
Trim54Q9ERP3 Gm14596-201ENSMUST00000180268 537 ntBASIC3.84□□□□□ -1.79
Trim54Q9ERP3 Gm14595-201ENSMUST00000180335 537 ntBASIC3.84□□□□□ -1.79
Trim54Q9ERP3 Gm28654-201ENSMUST00000189801 379 ntBASIC3.84□□□□□ -1.79
Trim54Q9ERP3 Gm37701-201ENSMUST00000192947 1100 ntBASIC3.84□□□□□ -1.79
Trim54Q9ERP3 Gm37757-201ENSMUST00000193072 210 ntBASIC3.84□□□□□ -1.79
Trim54Q9ERP3 Gm43475-201ENSMUST00000196673 400 ntTSL 2 BASIC3.84□□□□□ -1.79
Trim54Q9ERP3 Traj57-202ENSMUST00000196977 63 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Trim54Q9ERP3 Gm42622-201ENSMUST00000197229 355 ntBASIC3.84□□□□□ -1.79
Trim54Q9ERP3 Gm42530-201ENSMUST00000202683 550 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
Trim54Q9ERP3 Gm45400-201ENSMUST00000211603 653 ntBASIC3.84□□□□□ -1.79
Trim54Q9ERP3 AC161054.1-201ENSMUST00000214319 184 ntBASIC3.84□□□□□ -1.79
Trim54Q9ERP3 AC073947.3-201ENSMUST00000215576 766 ntBASIC3.84□□□□□ -1.79
Trim54Q9ERP3 Prl4a1-201ENSMUST00000021779 876 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
Trim54Q9ERP3 AC124489.2-201ENSMUST00000223930 589 ntBASIC3.84□□□□□ -1.79
Trim54Q9ERP3 AC173482.2-201ENSMUST00000224044 750 ntBASIC3.84□□□□□ -1.79
Trim54Q9ERP3 AC154603.1-201ENSMUST00000224355 313 ntBASIC3.84□□□□□ -1.79
Trim54Q9ERP3 CT030238.4-201ENSMUST00000228579 801 ntBASIC3.84□□□□□ -1.79
Trim54Q9ERP3 Lelp1-201ENSMUST00000029535 857 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
Trim54Q9ERP3 Snord38a-201ENSMUST00000083746 71 ntBASIC3.84□□□□□ -1.79
Trim54Q9ERP3 Olfr831-ps1-201ENSMUST00000086496 890 ntBASIC3.84□□□□□ -1.79
Trim54Q9ERP3 Gm15292-201ENSMUST00000098895 385 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
Trim54Q9ERP3 Olfr1282-201ENSMUST00000099618 918 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Trim54Q9ERP3 Vmn1r178-204ENSMUST00000226640 2282 ntBASIC3.84□□□□□ -1.79
Trim54Q9ERP3 Gm9972-201ENSMUST00000069051 1533 ntAPPRIS P1 BASIC3.84□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 109.1 ms