Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Zfp984-201ENSMUST00000105734 2729 ntAPPRIS P1 TSL 3 BASIC2.46□□□□□ -2.02
Lima1Q9ERG0 Olfr1161-203ENSMUST00000217006 3647 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
Lima1Q9ERG0 Vmn2r65-201ENSMUST00000044583 2538 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
Lima1Q9ERG0 Gm45178-201ENSMUST00000207744 4110 ntBASIC2.45□□□□□ -2.02
Lima1Q9ERG0 Olfr1014-202ENSMUST00000213453 2447 ntAPPRIS P1 TSL 3 BASIC2.45□□□□□ -2.02
Lima1Q9ERG0 Gm6913-201ENSMUST00000100019 348 ntBASIC2.45□□□□□ -2.02
Lima1Q9ERG0 Mir208b-201ENSMUST00000104735 77 ntBASIC2.45□□□□□ -2.02
Lima1Q9ERG0 Gm16017-201ENSMUST00000119834 208 ntBASIC2.45□□□□□ -2.02
Lima1Q9ERG0 Gm11252-201ENSMUST00000120572 939 ntBASIC2.45□□□□□ -2.02
Lima1Q9ERG0 Gm12876-201ENSMUST00000120975 408 ntBASIC2.45□□□□□ -2.02
Lima1Q9ERG0 Gm11321-201ENSMUST00000121257 902 ntBASIC2.45□□□□□ -2.02
Lima1Q9ERG0 Gm1989-201ENSMUST00000126244 636 ntBASIC2.45□□□□□ -2.02
Lima1Q9ERG0 4930401O12Rik-201ENSMUST00000153175 841 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
Lima1Q9ERG0 Gm22252-201ENSMUST00000179316 79 ntBASIC2.45□□□□□ -2.02
Lima1Q9ERG0 Gm27582-201ENSMUST00000184084 126 ntBASIC2.45□□□□□ -2.02
Lima1Q9ERG0 Gm8676-201ENSMUST00000184206 637 ntBASIC2.45□□□□□ -2.02
Lima1Q9ERG0 Gm27249-201ENSMUST00000185049 328 ntBASIC2.45□□□□□ -2.02
Lima1Q9ERG0 Gm21489-201ENSMUST00000189668 818 ntBASIC2.45□□□□□ -2.02
Lima1Q9ERG0 Gm37979-201ENSMUST00000193065 712 ntBASIC2.45□□□□□ -2.02
Lima1Q9ERG0 Gm44300-201ENSMUST00000196792 121 ntBASIC2.45□□□□□ -2.02
Lima1Q9ERG0 Gm8031-201ENSMUST00000213430 626 ntBASIC2.45□□□□□ -2.02
Lima1Q9ERG0 Gm4921-201ENSMUST00000219804 992 ntBASIC2.45□□□□□ -2.02
Lima1Q9ERG0 CT030159.4-201ENSMUST00000221966 395 ntBASIC2.45□□□□□ -2.02
Lima1Q9ERG0 AC134860.6-201ENSMUST00000226038 285 ntBASIC2.45□□□□□ -2.02
Lima1Q9ERG0 AC137871.2-201ENSMUST00000226482 289 ntBASIC2.45□□□□□ -2.02
Lima1Q9ERG0 AC101945.3-201ENSMUST00000226568 153 ntBASIC2.45□□□□□ -2.02
Lima1Q9ERG0 C2cd6b-201ENSMUST00000054653 878 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
Lima1Q9ERG0 Gm22249-201ENSMUST00000082485 136 ntBASIC2.45□□□□□ -2.02
Lima1Q9ERG0 Gm16436-201ENSMUST00000121510 1607 ntBASIC2.45□□□□□ -2.02
Lima1Q9ERG0 Chst9-201ENSMUST00000053017 1620 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
Lima1Q9ERG0 Gm3867-202ENSMUST00000181639 2007 ntTSL 2 BASIC2.44□□□□□ -2.02
Lima1Q9ERG0 Gm13136-201ENSMUST00000121031 2950 ntBASIC2.44□□□□□ -2.02
Lima1Q9ERG0 Gm42524-201ENSMUST00000202881 2214 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
Lima1Q9ERG0 Olfr135-202ENSMUST00000213217 2917 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
Lima1Q9ERG0 Dppa1-202ENSMUST00000109227 551 ntAPPRIS P1 TSL 2 BASIC2.44□□□□□ -2.02
Lima1Q9ERG0 Ccnb2-ps-201ENSMUST00000118290 623 ntBASIC2.44□□□□□ -2.02
Lima1Q9ERG0 Gm8880-201ENSMUST00000121800 454 ntBASIC2.44□□□□□ -2.02
Lima1Q9ERG0 Gm23033-201ENSMUST00000157996 134 ntBASIC2.44□□□□□ -2.02
Lima1Q9ERG0 Gm24019-201ENSMUST00000178620 107 ntBASIC2.44□□□□□ -2.02
Lima1Q9ERG0 Gm26243-201ENSMUST00000179260 107 ntBASIC2.44□□□□□ -2.02
Lima1Q9ERG0 Gm26701-201ENSMUST00000181571 234 ntBASIC2.44□□□□□ -2.02
Lima1Q9ERG0 Gm27220-201ENSMUST00000183453 262 ntBASIC2.44□□□□□ -2.02
Lima1Q9ERG0 Gm27505-201ENSMUST00000185071 110 ntBASIC2.44□□□□□ -2.02
Lima1Q9ERG0 Gm20897-201ENSMUST00000185240 923 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
Lima1Q9ERG0 Gm20883-201ENSMUST00000185245 922 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
Lima1Q9ERG0 Gm21117-202ENSMUST00000185327 925 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
Lima1Q9ERG0 Gm20916-202ENSMUST00000185338 923 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
Lima1Q9ERG0 Gm28897-201ENSMUST00000185340 923 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
Lima1Q9ERG0 Gm20736-202ENSMUST00000185550 923 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
Lima1Q9ERG0 Gm20835-201ENSMUST00000185565 923 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
Lima1Q9ERG0 Gm29564-201ENSMUST00000185575 923 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
Lima1Q9ERG0 Gm29299-201ENSMUST00000185609 923 ntBASIC2.44□□□□□ -2.02
Lima1Q9ERG0 Gm21317-201ENSMUST00000185636 923 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
Lima1Q9ERG0 Gm21095-202ENSMUST00000185776 923 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
Lima1Q9ERG0 Gm28553-201ENSMUST00000185924 923 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
Lima1Q9ERG0 Gm20908-201ENSMUST00000186004 922 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
Lima1Q9ERG0 Gm20906-201ENSMUST00000186493 923 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
Lima1Q9ERG0 Gm20929-201ENSMUST00000186578 923 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
Lima1Q9ERG0 Gm21518-202ENSMUST00000186938 922 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
Lima1Q9ERG0 Gm20855-202ENSMUST00000186996 924 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
Lima1Q9ERG0 Gm20911-201ENSMUST00000187135 924 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
Lima1Q9ERG0 Gm28102-201ENSMUST00000187146 924 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
Lima1Q9ERG0 Gm28827-201ENSMUST00000187165 923 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
Lima1Q9ERG0 Gm29045-201ENSMUST00000187278 698 ntBASIC2.44□□□□□ -2.02
Lima1Q9ERG0 Gm20931-202ENSMUST00000187293 922 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
Lima1Q9ERG0 Gm21760-202ENSMUST00000187433 923 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
Lima1Q9ERG0 Gm20920-201ENSMUST00000187477 922 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
Lima1Q9ERG0 Gm21627-201ENSMUST00000187768 918 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
Lima1Q9ERG0 Gm29554-201ENSMUST00000187922 821 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
Lima1Q9ERG0 Gm20850-201ENSMUST00000188672 924 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
Lima1Q9ERG0 Gm21488-201ENSMUST00000188744 923 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
Lima1Q9ERG0 Gm20820-201ENSMUST00000188754 921 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
Lima1Q9ERG0 Gm20894-201ENSMUST00000188864 923 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
Lima1Q9ERG0 Gm20869-201ENSMUST00000188958 924 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
Lima1Q9ERG0 Gm21173-201ENSMUST00000189238 923 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
Lima1Q9ERG0 Gm20870-201ENSMUST00000189315 922 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
Lima1Q9ERG0 Gm20903-201ENSMUST00000189346 923 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
Lima1Q9ERG0 Gm21209-202ENSMUST00000189354 922 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
Lima1Q9ERG0 Gm20937-203ENSMUST00000189422 923 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
Lima1Q9ERG0 Gm20890-201ENSMUST00000189518 923 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
Lima1Q9ERG0 Gm21477-202ENSMUST00000189543 924 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
Lima1Q9ERG0 Gm29110-201ENSMUST00000189924 922 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
Lima1Q9ERG0 Gm20814-201ENSMUST00000190173 922 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
Lima1Q9ERG0 Gm29573-201ENSMUST00000190291 919 ntBASIC2.44□□□□□ -2.02
Lima1Q9ERG0 Sly-202ENSMUST00000190292 922 ntAPPRIS P2 TSL 1 (best) BASIC2.44□□□□□ -2.02
Lima1Q9ERG0 Gm21650-202ENSMUST00000190551 923 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
Lima1Q9ERG0 Gm20905-201ENSMUST00000190782 923 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
Lima1Q9ERG0 Gm20817-201ENSMUST00000191123 923 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
Lima1Q9ERG0 Gm20843-202ENSMUST00000191305 925 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
Lima1Q9ERG0 Gm21258-202ENSMUST00000191553 923 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
Lima1Q9ERG0 Gm29866-201ENSMUST00000191675 923 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
Lima1Q9ERG0 Gm37565-201ENSMUST00000192277 491 ntTSL 3 BASIC2.44□□□□□ -2.02
Lima1Q9ERG0 Gm31571-201ENSMUST00000192521 922 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
Lima1Q9ERG0 Gm38141-201ENSMUST00000192540 317 ntTSL 5 BASIC2.44□□□□□ -2.02
Lima1Q9ERG0 Gm21366-201ENSMUST00000192892 923 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
Lima1Q9ERG0 Gm18692-201ENSMUST00000193047 511 ntBASIC2.44□□□□□ -2.02
Lima1Q9ERG0 Gm7299-201ENSMUST00000194441 581 ntBASIC2.44□□□□□ -2.02
Lima1Q9ERG0 AC150314.1-201ENSMUST00000214798 238 ntBASIC2.44□□□□□ -2.02
Lima1Q9ERG0 Gm18039-201ENSMUST00000217816 728 ntBASIC2.44□□□□□ -2.02
Lima1Q9ERG0 AC117814.1-201ENSMUST00000226135 352 ntBASIC2.44□□□□□ -2.02
Retrieved 100 of 76,532 protein–RNA pairs in 82.8 ms