Protein–RNA interactions for Protein: Q9EPU4

Cpsf1, Cleavage and polyadenylation specificity factor subunit 1, mousemouse

Known RBP Predictions only

Length 1,441 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf1Q9EPU4 Gm14588-201ENSMUST00000119895 172 ntBASIC2.59□□□□□ -2
Cpsf1Q9EPU4 Mrgprb1-202ENSMUST00000188095 472 ntTSL 3 BASIC2.59□□□□□ -2
Cpsf1Q9EPU4 Gm43975-201ENSMUST00000203023 481 ntBASIC2.59□□□□□ -2
Cpsf1Q9EPU4 Gm45034-201ENSMUST00000206831 482 ntBASIC2.59□□□□□ -2
Cpsf1Q9EPU4 Olfr1233-203ENSMUST00000215469 1205 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -2
Cpsf1Q9EPU4 AC154828.2-201ENSMUST00000220908 1070 ntBASIC2.59□□□□□ -2
Cpsf1Q9EPU4 AC133598.3-201ENSMUST00000224322 568 ntBASIC2.59□□□□□ -2
Cpsf1Q9EPU4 Gm2066-201ENSMUST00000118046 389 ntBASIC2.58□□□□□ -2
Cpsf1Q9EPU4 Gm2288-201ENSMUST00000118560 638 ntBASIC2.58□□□□□ -2
Cpsf1Q9EPU4 Gm2318-201ENSMUST00000119623 639 ntBASIC2.58□□□□□ -2
Cpsf1Q9EPU4 Olfr1027-ps1-201ENSMUST00000122338 875 ntBASIC2.58□□□□□ -2
Cpsf1Q9EPU4 Gm12150-201ENSMUST00000130874 468 ntTSL 3 BASIC2.58□□□□□ -2
Cpsf1Q9EPU4 Gm22563-201ENSMUST00000157333 269 ntBASIC2.58□□□□□ -2
Cpsf1Q9EPU4 Gm14819-202ENSMUST00000169396 639 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Cpsf1Q9EPU4 Gm10487-201ENSMUST00000177566 639 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Cpsf1Q9EPU4 Gm7438-201ENSMUST00000177664 639 ntBASIC2.58□□□□□ -2
Cpsf1Q9EPU4 Gm14632-202ENSMUST00000177917 639 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Cpsf1Q9EPU4 Gm7408-201ENSMUST00000178014 639 ntBASIC2.58□□□□□ -2
Cpsf1Q9EPU4 Gm7386-201ENSMUST00000178020 639 ntBASIC2.58□□□□□ -2
Cpsf1Q9EPU4 Gm10058-202ENSMUST00000178152 639 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Cpsf1Q9EPU4 Gm3657-201ENSMUST00000178170 639 ntBASIC2.58□□□□□ -2
Cpsf1Q9EPU4 Gm7415-201ENSMUST00000178205 639 ntBASIC2.58□□□□□ -2
Cpsf1Q9EPU4 Gm7398-201ENSMUST00000178589 639 ntBASIC2.58□□□□□ -2
Cpsf1Q9EPU4 Gm10096-201ENSMUST00000178672 639 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Cpsf1Q9EPU4 Gm7391-201ENSMUST00000178680 639 ntBASIC2.58□□□□□ -2
Cpsf1Q9EPU4 Gm10230-202ENSMUST00000178745 639 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Cpsf1Q9EPU4 Gm2092-201ENSMUST00000178887 639 ntBASIC2.58□□□□□ -2
Cpsf1Q9EPU4 Gm10147-202ENSMUST00000178966 639 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Cpsf1Q9EPU4 Gm5935-202ENSMUST00000178986 639 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Cpsf1Q9EPU4 Gm7375-201ENSMUST00000179232 639 ntBASIC2.58□□□□□ -2
Cpsf1Q9EPU4 Gm2759-201ENSMUST00000179938 639 ntBASIC2.58□□□□□ -2
Cpsf1Q9EPU4 Gm3681-201ENSMUST00000179940 639 ntBASIC2.58□□□□□ -2
Cpsf1Q9EPU4 Gm37146-201ENSMUST00000192572 463 ntTSL 3 BASIC2.58□□□□□ -2
Cpsf1Q9EPU4 AC069561.4-201ENSMUST00000215291 572 ntAPPRIS P1 TSL 3 BASIC2.58□□□□□ -2
Cpsf1Q9EPU4 AC133498.1-203ENSMUST00000221213 668 ntTSL 3 BASIC2.58□□□□□ -2
Cpsf1Q9EPU4 AC123658.1-201ENSMUST00000228364 867 ntBASIC2.58□□□□□ -2
Cpsf1Q9EPU4 Gm24044-201ENSMUST00000083107 156 ntBASIC2.58□□□□□ -2
Cpsf1Q9EPU4 Gm23249-201ENSMUST00000083369 161 ntBASIC2.58□□□□□ -2
Cpsf1Q9EPU4 Gm21286-201ENSMUST00000098035 545 ntBASIC2.58□□□□□ -2
Cpsf1Q9EPU4 AC152951.2-201ENSMUST00000218293 3587 ntBASIC2.57□□□□□ -2
Cpsf1Q9EPU4 Gm15421-202ENSMUST00000118224 399 ntBASIC2.57□□□□□ -2
Cpsf1Q9EPU4 Gm22521-201ENSMUST00000158272 134 ntBASIC2.57□□□□□ -2
Cpsf1Q9EPU4 Gm23207-201ENSMUST00000158665 102 ntBASIC2.57□□□□□ -2
Cpsf1Q9EPU4 Gm44938-201ENSMUST00000208614 427 ntBASIC2.57□□□□□ -2
Cpsf1Q9EPU4 Olfr490-201ENSMUST00000210114 945 ntAPPRIS P1 BASIC2.57□□□□□ -2
Cpsf1Q9EPU4 Gm8633-201ENSMUST00000218457 558 ntTSL 3 BASIC2.57□□□□□ -2
Cpsf1Q9EPU4 Gm42664-201ENSMUST00000199417 3239 ntBASIC2.56□□□□□ -2
Cpsf1Q9EPU4 Gm24280-201ENSMUST00000104237 134 ntBASIC2.56□□□□□ -2
Cpsf1Q9EPU4 4933413L06Rik-202ENSMUST00000111588 922 ntTSL 1 (best) BASIC2.56□□□□□ -2
Cpsf1Q9EPU4 Olfr260-ps1-201ENSMUST00000117279 822 ntBASIC2.56□□□□□ -2
Cpsf1Q9EPU4 Gm14292-201ENSMUST00000118761 456 ntBASIC2.56□□□□□ -2
Cpsf1Q9EPU4 Gm12926-201ENSMUST00000121158 409 ntBASIC2.56□□□□□ -2
Cpsf1Q9EPU4 Gm22554-201ENSMUST00000157798 147 ntBASIC2.56□□□□□ -2
Cpsf1Q9EPU4 Samd15-201ENSMUST00000169669 1194 ntBASIC2.56□□□□□ -2
Cpsf1Q9EPU4 Gm43901-201ENSMUST00000203247 453 ntBASIC2.56□□□□□ -2
Cpsf1Q9EPU4 AC122393.1-201ENSMUST00000226570 319 ntBASIC2.56□□□□□ -2
Cpsf1Q9EPU4 S100a11-201ENSMUST00000029515 511 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Cpsf1Q9EPU4 Klra3-201ENSMUST00000088017 984 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Cpsf1Q9EPU4 Gm20557-201ENSMUST00000192871 2794 ntTSL 1 (best) BASIC2.56□□□□□ -2
Cpsf1Q9EPU4 Gm14404-201ENSMUST00000119117 1660 ntBASIC2.55□□□□□ -2
Cpsf1Q9EPU4 Gm43882-201ENSMUST00000204871 2264 ntBASIC2.55□□□□□ -2
Cpsf1Q9EPU4 Gm22494-201ENSMUST00000104495 128 ntBASIC2.55□□□□□ -2
Cpsf1Q9EPU4 Gm15087-201ENSMUST00000117465 1172 ntBASIC2.55□□□□□ -2
Cpsf1Q9EPU4 Gm12294-201ENSMUST00000119723 490 ntBASIC2.55□□□□□ -2
Cpsf1Q9EPU4 Gm14905-201ENSMUST00000122351 639 ntBASIC2.55□□□□□ -2
Cpsf1Q9EPU4 Vmn1r-ps86-201ENSMUST00000174052 547 ntBASIC2.55□□□□□ -2
Cpsf1Q9EPU4 Spin2-ps6-201ENSMUST00000178459 525 ntAPPRIS P1 BASIC2.55□□□□□ -2
Cpsf1Q9EPU4 Gm29155-202ENSMUST00000186289 216 ntTSL 5 BASIC2.55□□□□□ -2
Cpsf1Q9EPU4 Gm44559-201ENSMUST00000207177 1012 ntBASIC2.55□□□□□ -2
Cpsf1Q9EPU4 Olfr1464-ps1-201ENSMUST00000208760 923 ntAPPRIS P1 BASIC2.55□□□□□ -2
Cpsf1Q9EPU4 Mir30d-201ENSMUST00000083503 82 ntBASIC2.55□□□□□ -2
Cpsf1Q9EPU4 Gm14020-201ENSMUST00000118165 662 ntBASIC2.54□□□□□ -2
Cpsf1Q9EPU4 Gm11357-201ENSMUST00000119758 954 ntBASIC2.54□□□□□ -2
Cpsf1Q9EPU4 Gm11430-201ENSMUST00000121317 217 ntBASIC2.54□□□□□ -2
Cpsf1Q9EPU4 Gm22036-201ENSMUST00000157279 215 ntBASIC2.54□□□□□ -2
Cpsf1Q9EPU4 Gm24076-201ENSMUST00000158179 94 ntBASIC2.54□□□□□ -2
Cpsf1Q9EPU4 Olfr1434-203ENSMUST00000208197 1229 ntAPPRIS P1 BASIC2.54□□□□□ -2
Cpsf1Q9EPU4 Gm9375-201ENSMUST00000208899 903 ntBASIC2.54□□□□□ -2
Cpsf1Q9EPU4 CT009696.2-201ENSMUST00000216668 432 ntBASIC2.54□□□□□ -2
Cpsf1Q9EPU4 Gm20304-201ENSMUST00000218168 444 ntBASIC2.54□□□□□ -2
Cpsf1Q9EPU4 AC113031.4-201ENSMUST00000228381 514 ntBASIC2.54□□□□□ -2
Cpsf1Q9EPU4 5430402E10Rik-201ENSMUST00000063127 798 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Cpsf1Q9EPU4 Agmo-201ENSMUST00000049874 2423 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Cpsf1Q9EPU4 Gm3081-201ENSMUST00000193413 3025 ntBASIC2.53□□□□□ -2
Cpsf1Q9EPU4 Gm15896-201ENSMUST00000118045 440 ntBASIC2.53□□□□□ -2
Cpsf1Q9EPU4 Mup-ps4-201ENSMUST00000151005 539 ntBASIC2.53□□□□□ -2
Cpsf1Q9EPU4 Gm37778-201ENSMUST00000191732 190 ntBASIC2.53□□□□□ -2
Cpsf1Q9EPU4 AC107808.1-201ENSMUST00000213260 386 ntTSL 3 BASIC2.53□□□□□ -2
Cpsf1Q9EPU4 AC141895.1-201ENSMUST00000218141 273 ntBASIC2.53□□□□□ -2
Cpsf1Q9EPU4 AC090496.1-201ENSMUST00000226020 260 ntBASIC2.53□□□□□ -2
Cpsf1Q9EPU4 Olfr1325-203ENSMUST00000216108 3535 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
Cpsf1Q9EPU4 Olfr921-203ENSMUST00000217114 4120 ntAPPRIS P1 TSL 2 BASIC2.53□□□□□ -2
Cpsf1Q9EPU4 Olfr1177-ps-202ENSMUST00000216713 2821 ntAPPRIS P5 TSL 3 BASIC2.52□□□□□ -2.01
Cpsf1Q9EPU4 Gm7133-201ENSMUST00000187797 2039 ntBASIC2.52□□□□□ -2.01
Cpsf1Q9EPU4 Gm773-201ENSMUST00000101561 951 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
Cpsf1Q9EPU4 Gm12230-201ENSMUST00000118301 454 ntBASIC2.52□□□□□ -2.01
Cpsf1Q9EPU4 Gm14986-201ENSMUST00000121262 1002 ntBASIC2.52□□□□□ -2.01
Cpsf1Q9EPU4 Gm11438-201ENSMUST00000121582 189 ntBASIC2.52□□□□□ -2.01
Cpsf1Q9EPU4 Gm23476-201ENSMUST00000158881 274 ntBASIC2.52□□□□□ -2.01
Cpsf1Q9EPU4 Gm18855-201ENSMUST00000206689 570 ntBASIC2.52□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 97.9 ms