Protein–RNA interactions for Protein: Q9D6Y1

Ccdc3, Coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3Q9D6Y1 Gm26099-201ENSMUST00000157248 109 ntBASIC2.49□□□□□ -2.01
Ccdc3Q9D6Y1 Gm22227-201ENSMUST00000157356 259 ntBASIC2.49□□□□□ -2.01
Ccdc3Q9D6Y1 Gm24060-201ENSMUST00000157494 95 ntBASIC2.49□□□□□ -2.01
Ccdc3Q9D6Y1 Gm26487-201ENSMUST00000158022 94 ntBASIC2.49□□□□□ -2.01
Ccdc3Q9D6Y1 Gm25863-201ENSMUST00000158249 329 ntBASIC2.49□□□□□ -2.01
Ccdc3Q9D6Y1 Gm25902-201ENSMUST00000158493 318 ntBASIC2.49□□□□□ -2.01
Ccdc3Q9D6Y1 AC154297.1-201ENSMUST00000171334 397 ntBASIC2.49□□□□□ -2.01
Ccdc3Q9D6Y1 Vmn1r14-201ENSMUST00000177435 912 ntAPPRIS P2 BASIC2.49□□□□□ -2.01
Ccdc3Q9D6Y1 Gm6801-201ENSMUST00000190697 339 ntBASIC2.49□□□□□ -2.01
Ccdc3Q9D6Y1 Fasl-202ENSMUST00000193648 406 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
Ccdc3Q9D6Y1 Gm15235-201ENSMUST00000200572 194 ntBASIC2.49□□□□□ -2.01
Ccdc3Q9D6Y1 Gm44404-201ENSMUST00000203979 636 ntBASIC2.49□□□□□ -2.01
Ccdc3Q9D6Y1 AC153506.2-201ENSMUST00000218051 257 ntBASIC2.49□□□□□ -2.01
Ccdc3Q9D6Y1 C2cd6b-201ENSMUST00000054653 878 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
Ccdc3Q9D6Y1 Ifnk-201ENSMUST00000058595 805 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
Ccdc3Q9D6Y1 n-R5s50-201ENSMUST00000083168 111 ntBASIC2.49□□□□□ -2.01
Ccdc3Q9D6Y1 A330044P14Rik-201ENSMUST00000176108 2706 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
Ccdc3Q9D6Y1 Vmn1r66-203ENSMUST00000227719 2765 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
Ccdc3Q9D6Y1 Vmn2r68-201ENSMUST00000061074 2556 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
Ccdc3Q9D6Y1 Olfr197-202ENSMUST00000207772 1320 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
Ccdc3Q9D6Y1 AC125223.3-201ENSMUST00000223588 2067 ntBASIC2.48□□□□□ -2.01
Ccdc3Q9D6Y1 Vmn1r-ps97-201ENSMUST00000118338 603 ntBASIC2.48□□□□□ -2.01
Ccdc3Q9D6Y1 Gm11429-201ENSMUST00000119089 144 ntBASIC2.48□□□□□ -2.01
Ccdc3Q9D6Y1 Gm14841-201ENSMUST00000121067 758 ntBASIC2.48□□□□□ -2.01
Ccdc3Q9D6Y1 Gm2343-201ENSMUST00000161177 1042 ntBASIC2.48□□□□□ -2.01
Ccdc3Q9D6Y1 Vmn1r-ps26-201ENSMUST00000174239 840 ntBASIC2.48□□□□□ -2.01
Ccdc3Q9D6Y1 Gm22111-201ENSMUST00000178010 79 ntBASIC2.48□□□□□ -2.01
Ccdc3Q9D6Y1 Gm8926-202ENSMUST00000178158 465 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
Ccdc3Q9D6Y1 Gm23687-201ENSMUST00000178664 79 ntBASIC2.48□□□□□ -2.01
Ccdc3Q9D6Y1 Gm8879-202ENSMUST00000178863 465 ntTSL 5 BASIC2.48□□□□□ -2.01
Ccdc3Q9D6Y1 Gm8922-202ENSMUST00000178989 465 ntTSL 5 BASIC2.48□□□□□ -2.01
Ccdc3Q9D6Y1 Gm24566-201ENSMUST00000179286 79 ntBASIC2.48□□□□□ -2.01
Ccdc3Q9D6Y1 Gm23305-201ENSMUST00000179342 79 ntBASIC2.48□□□□□ -2.01
Ccdc3Q9D6Y1 Speer1-202ENSMUST00000179482 465 ntTSL 5 BASIC2.48□□□□□ -2.01
Ccdc3Q9D6Y1 Gm26389-201ENSMUST00000179819 79 ntBASIC2.48□□□□□ -2.01
Ccdc3Q9D6Y1 Gm22130-201ENSMUST00000179979 79 ntBASIC2.48□□□□□ -2.01
Ccdc3Q9D6Y1 Gm22393-201ENSMUST00000180153 79 ntBASIC2.48□□□□□ -2.01
Ccdc3Q9D6Y1 Gm25085-201ENSMUST00000180298 79 ntBASIC2.48□□□□□ -2.01
Ccdc3Q9D6Y1 Mir8090-201ENSMUST00000185078 136 ntBASIC2.48□□□□□ -2.01
Ccdc3Q9D6Y1 1810022K09Rik-204ENSMUST00000186870 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC2.48□□□□□ -2.01
Ccdc3Q9D6Y1 Gm44300-201ENSMUST00000196792 121 ntBASIC2.48□□□□□ -2.01
Ccdc3Q9D6Y1 Gm45879-201ENSMUST00000212521 392 ntBASIC2.48□□□□□ -2.01
Ccdc3Q9D6Y1 CAAA01090811.1-201ENSMUST00000216828 277 ntBASIC2.48□□□□□ -2.01
Ccdc3Q9D6Y1 AC142191.1-201ENSMUST00000219217 699 ntTSL 5 BASIC2.48□□□□□ -2.01
Ccdc3Q9D6Y1 AC115289.1-201ENSMUST00000224915 522 ntBASIC2.48□□□□□ -2.01
Ccdc3Q9D6Y1 Gm4855-201ENSMUST00000192270 1967 ntBASIC2.48□□□□□ -2.01
Ccdc3Q9D6Y1 Lrrc19-202ENSMUST00000107101 2820 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
Ccdc3Q9D6Y1 AU041133-201ENSMUST00000105314 1494 ntTSL 5 BASIC2.47□□□□□ -2.01
Ccdc3Q9D6Y1 Trbv30-201ENSMUST00000103282 332 ntAPPRIS ALT2 BASIC2.47□□□□□ -2.01
Ccdc3Q9D6Y1 Gm26015-201ENSMUST00000104402 125 ntBASIC2.47□□□□□ -2.01
Ccdc3Q9D6Y1 Gm23803-201ENSMUST00000104610 132 ntBASIC2.47□□□□□ -2.01
Ccdc3Q9D6Y1 Mir208b-201ENSMUST00000104735 77 ntBASIC2.47□□□□□ -2.01
Ccdc3Q9D6Y1 Gm7209-201ENSMUST00000122339 333 ntBASIC2.47□□□□□ -2.01
Ccdc3Q9D6Y1 Gm23889-201ENSMUST00000122689 104 ntBASIC2.47□□□□□ -2.01
Ccdc3Q9D6Y1 Gm26411-201ENSMUST00000157668 107 ntBASIC2.47□□□□□ -2.01
Ccdc3Q9D6Y1 Gm22416-201ENSMUST00000158590 88 ntBASIC2.47□□□□□ -2.01
Ccdc3Q9D6Y1 Gm25119-201ENSMUST00000158815 88 ntBASIC2.47□□□□□ -2.01
Ccdc3Q9D6Y1 Gm16584-201ENSMUST00000159267 189 ntBASIC2.47□□□□□ -2.01
Ccdc3Q9D6Y1 Ifi206-202ENSMUST00000169797 429 ntTSL 5 BASIC2.47□□□□□ -2.01
Ccdc3Q9D6Y1 Vmn1r-ps49-201ENSMUST00000177009 879 ntBASIC2.47□□□□□ -2.01
Ccdc3Q9D6Y1 Gm29051-201ENSMUST00000190184 369 ntTSL 5 BASIC2.47□□□□□ -2.01
Ccdc3Q9D6Y1 Gm43897-201ENSMUST00000204019 309 ntBASIC2.47□□□□□ -2.01
Ccdc3Q9D6Y1 AC157352.1-201ENSMUST00000222762 303 ntTSL 5 BASIC2.47□□□□□ -2.01
Ccdc3Q9D6Y1 AC113031.2-201ENSMUST00000226132 579 ntBASIC2.47□□□□□ -2.01
Ccdc3Q9D6Y1 Gm22293-201ENSMUST00000083314 109 ntBASIC2.47□□□□□ -2.01
Ccdc3Q9D6Y1 Olfr847-202ENSMUST00000216839 2385 ntAPPRIS P1 TSL 3 BASIC2.47□□□□□ -2.01
Ccdc3Q9D6Y1 Mgat4c-211ENSMUST00000163753 3862 ntAPPRIS P1 TSL 3 BASIC2.46□□□□□ -2.01
Ccdc3Q9D6Y1 Srsy-201ENSMUST00000179900 1618 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
Ccdc3Q9D6Y1 Mir542-201ENSMUST00000102186 85 ntBASIC2.46□□□□□ -2.02
Ccdc3Q9D6Y1 Trav16-201ENSMUST00000103667 420 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
Ccdc3Q9D6Y1 Iglv3-201ENSMUST00000103751 381 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
Ccdc3Q9D6Y1 Olfr1327-ps1-201ENSMUST00000117953 835 ntBASIC2.46□□□□□ -2.02
Ccdc3Q9D6Y1 Gm13751-201ENSMUST00000120280 752 ntBASIC2.46□□□□□ -2.02
Ccdc3Q9D6Y1 Gm12105-201ENSMUST00000120846 779 ntBASIC2.46□□□□□ -2.02
Ccdc3Q9D6Y1 Gm14126-201ENSMUST00000122345 395 ntBASIC2.46□□□□□ -2.02
Ccdc3Q9D6Y1 Gm16359-201ENSMUST00000124511 289 ntBASIC2.46□□□□□ -2.02
Ccdc3Q9D6Y1 Ppp1r2-ps7-201ENSMUST00000140102 609 ntBASIC2.46□□□□□ -2.02
Ccdc3Q9D6Y1 Gm17655-201ENSMUST00000167969 255 ntBASIC2.46□□□□□ -2.02
Ccdc3Q9D6Y1 Gm20534-201ENSMUST00000172957 172 ntBASIC2.46□□□□□ -2.02
Ccdc3Q9D6Y1 Trav6-3-202ENSMUST00000183604 305 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
Ccdc3Q9D6Y1 Trav6d-3-202ENSMUST00000184883 308 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
Ccdc3Q9D6Y1 Gm28623-201ENSMUST00000187219 192 ntBASIC2.46□□□□□ -2.02
Ccdc3Q9D6Y1 Gm29335-201ENSMUST00000188361 459 ntBASIC2.46□□□□□ -2.02
Ccdc3Q9D6Y1 Gm19224-201ENSMUST00000190477 793 ntBASIC2.46□□□□□ -2.02
Ccdc3Q9D6Y1 Gm28271-201ENSMUST00000191369 351 ntTSL 3 BASIC2.46□□□□□ -2.02
Ccdc3Q9D6Y1 Gm37751-201ENSMUST00000192440 1198 ntBASIC2.46□□□□□ -2.02
Ccdc3Q9D6Y1 Gm38141-201ENSMUST00000192540 317 ntTSL 5 BASIC2.46□□□□□ -2.02
Ccdc3Q9D6Y1 Trbv12-3-201ENSMUST00000192675 372 ntBASIC2.46□□□□□ -2.02
Ccdc3Q9D6Y1 Igkv20-101-2-201ENSMUST00000200406 339 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
Ccdc3Q9D6Y1 Gm44903-201ENSMUST00000206840 130 ntBASIC2.46□□□□□ -2.02
Ccdc3Q9D6Y1 Olfr950-ps1-201ENSMUST00000213804 878 ntBASIC2.46□□□□□ -2.02
Ccdc3Q9D6Y1 Olfr953-ps1-201ENSMUST00000214463 892 ntBASIC2.46□□□□□ -2.02
Ccdc3Q9D6Y1 Vmn1r24-202ENSMUST00000228315 891 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
Ccdc3Q9D6Y1 Olfr1009-201ENSMUST00000055517 945 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
Ccdc3Q9D6Y1 Olfr1193-201ENSMUST00000081697 957 ntBASIC2.46□□□□□ -2.02
Ccdc3Q9D6Y1 Gm26439-201ENSMUST00000082592 106 ntBASIC2.46□□□□□ -2.02
Ccdc3Q9D6Y1 Olfr1040-201ENSMUST00000099909 942 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
Ccdc3Q9D6Y1 Gm43016-201ENSMUST00000196628 3150 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
Ccdc3Q9D6Y1 Olfr355-202ENSMUST00000213574 3610 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
Ccdc3Q9D6Y1 Gm14910-201ENSMUST00000121037 1805 ntBASIC2.45□□□□□ -2.02
Retrieved 100 of 76,532 protein–RNA pairs in 92.1 ms