Protein–RNA interactions for Protein: Q9D1C8

Vps28, Vacuolar protein sorting-associated protein 28 homolog, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps28Q9D1C8 Gm18703-201ENSMUST00000215318 333 ntBASIC3.53□□□□□ -1.84
Vps28Q9D1C8 AC139376.1-201ENSMUST00000220056 1250 ntBASIC3.53□□□□□ -1.84
Vps28Q9D1C8 4930448F12Rik-201ENSMUST00000220795 859 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
Vps28Q9D1C8 AC158521.1-201ENSMUST00000225295 660 ntBASIC3.53□□□□□ -1.84
Vps28Q9D1C8 Rps15a-ps1-201ENSMUST00000071120 393 ntBASIC3.53□□□□□ -1.84
Vps28Q9D1C8 Gm22970-201ENSMUST00000083304 186 ntBASIC3.53□□□□□ -1.84
Vps28Q9D1C8 Gm5800-201ENSMUST00000095916 903 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
Vps28Q9D1C8 Themis-201ENSMUST00000056097 5082 ntAPPRIS P2 TSL 1 (best) BASIC3.53□□□□□ -1.84
Vps28Q9D1C8 Cfh-202ENSMUST00000111976 4365 ntAPPRIS P2 TSL 1 (best) BASIC3.53□□□□□ -1.84
Vps28Q9D1C8 Cfh-201ENSMUST00000066859 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
Vps28Q9D1C8 Olfr1369-ps1-202ENSMUST00000213326 3707 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Vps28Q9D1C8 Vmn1r71-208ENSMUST00000228374 3717 ntAPPRIS P2 BASIC3.53□□□□□ -1.84
Vps28Q9D1C8 Olfr986-203ENSMUST00000216720 3381 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Vps28Q9D1C8 Olfr1043-203ENSMUST00000213949 1778 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Vps28Q9D1C8 Gm38699-201ENSMUST00000221301 1740 ntBASIC3.53□□□□□ -1.85
Vps28Q9D1C8 Gm9911-201ENSMUST00000211467 2802 ntBASIC3.52□□□□□ -1.85
Vps28Q9D1C8 Gm43881-201ENSMUST00000203051 2530 ntBASIC3.52□□□□□ -1.85
Vps28Q9D1C8 AC169038.1-201ENSMUST00000227378 1352 ntBASIC3.52□□□□□ -1.85
Vps28Q9D1C8 Gm28359-201ENSMUST00000187470 1322 ntBASIC3.52□□□□□ -1.85
Vps28Q9D1C8 Olfr1033-202ENSMUST00000213865 3664 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
Vps28Q9D1C8 Defa-ps5-201ENSMUST00000121541 279 ntBASIC3.52□□□□□ -1.85
Vps28Q9D1C8 Gm12276-201ENSMUST00000121709 301 ntBASIC3.52□□□□□ -1.85
Vps28Q9D1C8 Gm14684-201ENSMUST00000145722 123 ntTSL 5 BASIC3.52□□□□□ -1.85
Vps28Q9D1C8 Gm12534-201ENSMUST00000147691 469 ntTSL 3 BASIC3.52□□□□□ -1.85
Vps28Q9D1C8 Etaa1os-202ENSMUST00000148496 388 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
Vps28Q9D1C8 Gm15969-201ENSMUST00000151967 236 ntTSL 3 BASIC3.52□□□□□ -1.85
Vps28Q9D1C8 Gm25621-201ENSMUST00000157223 114 ntBASIC3.52□□□□□ -1.85
Vps28Q9D1C8 Gm25706-201ENSMUST00000157828 247 ntBASIC3.52□□□□□ -1.85
Vps28Q9D1C8 Gm24314-201ENSMUST00000158274 123 ntBASIC3.52□□□□□ -1.85
Vps28Q9D1C8 Gm24876-201ENSMUST00000158780 92 ntBASIC3.52□□□□□ -1.85
Vps28Q9D1C8 Gm6374-201ENSMUST00000159051 788 ntBASIC3.52□□□□□ -1.85
Vps28Q9D1C8 Gm17162-201ENSMUST00000168538 473 ntBASIC3.52□□□□□ -1.85
Vps28Q9D1C8 Gm17186-201ENSMUST00000171742 456 ntBASIC3.52□□□□□ -1.85
Vps28Q9D1C8 Gm20450-201ENSMUST00000173652 147 ntBASIC3.52□□□□□ -1.85
Vps28Q9D1C8 Gm26195-201ENSMUST00000175035 101 ntBASIC3.52□□□□□ -1.85
Vps28Q9D1C8 Mir5136-201ENSMUST00000175573 76 ntBASIC3.52□□□□□ -1.85
Vps28Q9D1C8 Gm21095-201ENSMUST00000177775 498 ntTSL 5 BASIC3.52□□□□□ -1.85
Vps28Q9D1C8 Gm20916-201ENSMUST00000178063 498 ntTSL 5 BASIC3.52□□□□□ -1.85
Vps28Q9D1C8 Gm21726-201ENSMUST00000179654 392 ntBASIC3.52□□□□□ -1.85
Vps28Q9D1C8 Gm21760-201ENSMUST00000179811 498 ntTSL 5 BASIC3.52□□□□□ -1.85
Vps28Q9D1C8 Gm21477-201ENSMUST00000179970 498 ntTSL 5 BASIC3.52□□□□□ -1.85
Vps28Q9D1C8 Gm21117-201ENSMUST00000180133 498 ntTSL 5 BASIC3.52□□□□□ -1.85
Vps28Q9D1C8 Gm20855-201ENSMUST00000180170 498 ntTSL 5 BASIC3.52□□□□□ -1.85
Vps28Q9D1C8 Gm20931-201ENSMUST00000180249 498 ntTSL 5 BASIC3.52□□□□□ -1.85
Vps28Q9D1C8 Gm20896-201ENSMUST00000180332 498 ntTSL 5 BASIC3.52□□□□□ -1.85
Vps28Q9D1C8 Gm37568-201ENSMUST00000191755 364 ntBASIC3.52□□□□□ -1.85
Vps28Q9D1C8 Gm37523-201ENSMUST00000194901 412 ntBASIC3.52□□□□□ -1.85
Vps28Q9D1C8 Gm42621-201ENSMUST00000198114 275 ntBASIC3.52□□□□□ -1.85
Vps28Q9D1C8 Eif4e-205ENSMUST00000200100 729 ntTSL 3 BASIC3.52□□□□□ -1.85
Vps28Q9D1C8 Gm39154-201ENSMUST00000210257 560 ntTSL 5 BASIC3.52□□□□□ -1.85
Vps28Q9D1C8 AC166060.1-201ENSMUST00000213509 425 ntTSL 5 BASIC3.52□□□□□ -1.85
Vps28Q9D1C8 AC116589.9-201ENSMUST00000221462 908 ntBASIC3.52□□□□□ -1.85
Vps28Q9D1C8 AC144733.1-201ENSMUST00000222893 1289 ntBASIC3.52□□□□□ -1.85
Vps28Q9D1C8 AC158395.1-201ENSMUST00000227206 452 ntBASIC3.52□□□□□ -1.85
Vps28Q9D1C8 Olfr791-201ENSMUST00000057477 939 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
Vps28Q9D1C8 Gm4987-201ENSMUST00000078326 408 ntBASIC3.52□□□□□ -1.85
Vps28Q9D1C8 Gm10719-201ENSMUST00000099047 681 ntAPPRIS P5 TSL 5 BASIC3.52□□□□□ -1.85
Vps28Q9D1C8 Olfr259-201ENSMUST00000099862 939 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
Vps28Q9D1C8 Hhla1-201ENSMUST00000100584 2262 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
Vps28Q9D1C8 Evi2b-201ENSMUST00000179322 1858 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
Vps28Q9D1C8 Gm15127-203ENSMUST00000112753 1950 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
Vps28Q9D1C8 Sacs-203ENSMUST00000119943 14991 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
Vps28Q9D1C8 Olfr379-ps1-201ENSMUST00000117349 934 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
Vps28Q9D1C8 Gm8217-201ENSMUST00000119136 465 ntBASIC3.51□□□□□ -1.85
Vps28Q9D1C8 Gm13717-201ENSMUST00000119868 365 ntBASIC3.51□□□□□ -1.85
Vps28Q9D1C8 Gm14694-201ENSMUST00000121856 282 ntBASIC3.51□□□□□ -1.85
Vps28Q9D1C8 Gm25107-201ENSMUST00000122472 129 ntBASIC3.51□□□□□ -1.85
Vps28Q9D1C8 Gm14951-201ENSMUST00000143622 570 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
Vps28Q9D1C8 Gm11917-201ENSMUST00000154813 373 ntTSL 2 BASIC3.51□□□□□ -1.85
Vps28Q9D1C8 Gm22225-201ENSMUST00000157358 278 ntBASIC3.51□□□□□ -1.85
Vps28Q9D1C8 Gm25637-201ENSMUST00000157529 107 ntBASIC3.51□□□□□ -1.85
Vps28Q9D1C8 Gm23592-201ENSMUST00000157859 117 ntBASIC3.51□□□□□ -1.85
Vps28Q9D1C8 Rpl23a-ps10-201ENSMUST00000185511 462 ntBASIC3.51□□□□□ -1.85
Vps28Q9D1C8 Gm28474-201ENSMUST00000188501 315 ntBASIC3.51□□□□□ -1.85
Vps28Q9D1C8 Igkv13-73-1-201ENSMUST00000196767 200 ntBASIC3.51□□□□□ -1.85
Vps28Q9D1C8 Gm43104-201ENSMUST00000197234 311 ntBASIC3.51□□□□□ -1.85
Vps28Q9D1C8 Gm42509-201ENSMUST00000197390 781 ntBASIC3.51□□□□□ -1.85
Vps28Q9D1C8 4930459L07Rik-201ENSMUST00000199751 420 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
Vps28Q9D1C8 Gm42665-201ENSMUST00000202100 586 ntBASIC3.51□□□□□ -1.85
Vps28Q9D1C8 Gm44049-201ENSMUST00000204905 2984 ntBASIC3.51□□□□□ -1.85
Vps28Q9D1C8 Gm37797-201ENSMUST00000212114 815 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
Vps28Q9D1C8 Gm18015-201ENSMUST00000214879 316 ntBASIC3.51□□□□□ -1.85
Vps28Q9D1C8 Gm20474-202ENSMUST00000220772 462 ntTSL 5 BASIC3.51□□□□□ -1.85
Vps28Q9D1C8 AC157494.1-201ENSMUST00000221127 549 ntTSL 5 BASIC3.51□□□□□ -1.85
Vps28Q9D1C8 AC157572.3-201ENSMUST00000227288 303 ntBASIC3.51□□□□□ -1.85
Vps28Q9D1C8 AC133076.1-201ENSMUST00000228074 484 ntBASIC3.51□□□□□ -1.85
Vps28Q9D1C8 Olfr1216-202ENSMUST00000216000 3595 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
Vps28Q9D1C8 Dst-201ENSMUST00000097785 23251 ntAPPRIS P4 TSL 1 (best) BASIC3.51□□□□□ -1.85
Vps28Q9D1C8 Postn-203ENSMUST00000107985 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
Vps28Q9D1C8 Nlrp9a-201ENSMUST00000071780 3125 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
Vps28Q9D1C8 Gm45352-201ENSMUST00000210140 1452 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Vps28Q9D1C8 Vmn2r-ps46-201ENSMUST00000172969 2556 ntBASIC3.5□□□□□ -1.85
Vps28Q9D1C8 Depdc1a-201ENSMUST00000029825 2920 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Vps28Q9D1C8 Gm23744-201ENSMUST00000104231 149 ntBASIC3.5□□□□□ -1.85
Vps28Q9D1C8 Gm14657-201ENSMUST00000117461 302 ntBASIC3.5□□□□□ -1.85
Vps28Q9D1C8 Gm12025-201ENSMUST00000117768 144 ntBASIC3.5□□□□□ -1.85
Vps28Q9D1C8 Tpt1-ps1-201ENSMUST00000120257 436 ntBASIC3.5□□□□□ -1.85
Vps28Q9D1C8 Gm14578-201ENSMUST00000122166 391 ntBASIC3.5□□□□□ -1.85
Vps28Q9D1C8 Gm13096-201ENSMUST00000127752 251 ntTSL 5 BASIC3.5□□□□□ -1.85
Vps28Q9D1C8 Gm22755-201ENSMUST00000157143 100 ntBASIC3.5□□□□□ -1.85
Retrieved 100 of 76,532 protein–RNA pairs in 91.9 ms