Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Fam184a-206ENSMUST00000169866 501 ntTSL 5 BASIC4.19□□□□□ -1.74
Ddx56Q9D0R4 Vmn1r-ps68-201ENSMUST00000174638 399 ntBASIC4.19□□□□□ -1.74
Ddx56Q9D0R4 Gm27245-201ENSMUST00000184385 376 ntBASIC4.19□□□□□ -1.74
Ddx56Q9D0R4 Gm27520-201ENSMUST00000184872 81 ntBASIC4.19□□□□□ -1.74
Ddx56Q9D0R4 Gm28304-201ENSMUST00000185977 312 ntBASIC4.19□□□□□ -1.74
Ddx56Q9D0R4 Gm29256-201ENSMUST00000189094 312 ntBASIC4.19□□□□□ -1.74
Ddx56Q9D0R4 BE692007-203ENSMUST00000189306 362 ntTSL 3 BASIC4.19□□□□□ -1.74
Ddx56Q9D0R4 Gm28484-201ENSMUST00000190606 312 ntBASIC4.19□□□□□ -1.74
Ddx56Q9D0R4 Gm43853-201ENSMUST00000197162 301 ntBASIC4.19□□□□□ -1.74
Ddx56Q9D0R4 Igkv13-80-1-201ENSMUST00000197926 255 ntBASIC4.19□□□□□ -1.74
Ddx56Q9D0R4 Gm43367-201ENSMUST00000199986 625 ntBASIC4.19□□□□□ -1.74
Ddx56Q9D0R4 Gm42453-201ENSMUST00000200477 409 ntBASIC4.19□□□□□ -1.74
Ddx56Q9D0R4 Gm44030-201ENSMUST00000204865 432 ntBASIC4.19□□□□□ -1.74
Ddx56Q9D0R4 AC158803.1-201ENSMUST00000219495 316 ntBASIC4.19□□□□□ -1.74
Ddx56Q9D0R4 Rpl31-ps2-201ENSMUST00000223231 343 ntBASIC4.19□□□□□ -1.74
Ddx56Q9D0R4 AC154368.1-201ENSMUST00000223465 205 ntTSL 5 BASIC4.19□□□□□ -1.74
Ddx56Q9D0R4 CT009713.6-201ENSMUST00000223615 294 ntBASIC4.19□□□□□ -1.74
Ddx56Q9D0R4 AC154747.1-201ENSMUST00000225265 239 ntBASIC4.19□□□□□ -1.74
Ddx56Q9D0R4 Ugp2-202ENSMUST00000102875 2683 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Ddx56Q9D0R4 Gm44821-201ENSMUST00000208212 2002 ntBASIC4.19□□□□□ -1.74
Ddx56Q9D0R4 Gm35835-202ENSMUST00000216984 3350 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Ddx56Q9D0R4 Cdh7-201ENSMUST00000027542 3390 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Ddx56Q9D0R4 Olfr1016-202ENSMUST00000216425 2698 ntAPPRIS P1 TSL 3 BASIC4.18□□□□□ -1.74
Ddx56Q9D0R4 Usp34-208ENSMUST00000180046 12200 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Ddx56Q9D0R4 Vmn1r178-203ENSMUST00000226489 2644 ntBASIC4.18□□□□□ -1.74
Ddx56Q9D0R4 St8sia4-204ENSMUST00000189556 10027 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Ddx56Q9D0R4 Pramel6-202ENSMUST00000111572 1781 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
Ddx56Q9D0R4 Gm13268-201ENSMUST00000117485 433 ntBASIC4.18□□□□□ -1.74
Ddx56Q9D0R4 Gm12252-201ENSMUST00000119517 219 ntBASIC4.18□□□□□ -1.74
Ddx56Q9D0R4 Gm6806-201ENSMUST00000120092 1006 ntBASIC4.18□□□□□ -1.74
Ddx56Q9D0R4 Gm25104-201ENSMUST00000122476 163 ntBASIC4.18□□□□□ -1.74
Ddx56Q9D0R4 Gm15597-201ENSMUST00000145924 1050 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Ddx56Q9D0R4 Gm24059-201ENSMUST00000157493 312 ntBASIC4.18□□□□□ -1.74
Ddx56Q9D0R4 Gm23905-201ENSMUST00000157568 109 ntBASIC4.18□□□□□ -1.74
Ddx56Q9D0R4 Gm16311-201ENSMUST00000161939 702 ntTSL 3 BASIC4.18□□□□□ -1.74
Ddx56Q9D0R4 Mir7031-201ENSMUST00000183860 65 ntBASIC4.18□□□□□ -1.74
Ddx56Q9D0R4 Gm21858-202ENSMUST00000185713 923 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
Ddx56Q9D0R4 Gm21409-201ENSMUST00000186110 923 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
Ddx56Q9D0R4 Gm7654-201ENSMUST00000186738 683 ntBASIC4.18□□□□□ -1.74
Ddx56Q9D0R4 Gm28961-201ENSMUST00000190573 923 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
Ddx56Q9D0R4 Gm30280-201ENSMUST00000192214 262 ntBASIC4.18□□□□□ -1.74
Ddx56Q9D0R4 Gm19694-201ENSMUST00000192364 505 ntBASIC4.18□□□□□ -1.74
Ddx56Q9D0R4 Gm8790-201ENSMUST00000194108 322 ntBASIC4.18□□□□□ -1.74
Ddx56Q9D0R4 Gm32447-201ENSMUST00000194265 697 ntBASIC4.18□□□□□ -1.74
Ddx56Q9D0R4 Olfr1482-ps1-201ENSMUST00000207181 178 ntBASIC4.18□□□□□ -1.74
Ddx56Q9D0R4 Olfr468-ps1-201ENSMUST00000207203 593 ntBASIC4.18□□□□□ -1.74
Ddx56Q9D0R4 Gm19140-201ENSMUST00000209790 421 ntBASIC4.18□□□□□ -1.74
Ddx56Q9D0R4 Prl2c5-201ENSMUST00000021778 844 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
Ddx56Q9D0R4 AC153977.1-201ENSMUST00000219416 506 ntTSL 5 BASIC4.18□□□□□ -1.74
Ddx56Q9D0R4 2610303G11Rik-201ENSMUST00000061643 517 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Ddx56Q9D0R4 Olfr305-201ENSMUST00000069236 960 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
Ddx56Q9D0R4 Gm5362-201ENSMUST00000211968 3085 ntBASIC4.18□□□□□ -1.74
Ddx56Q9D0R4 Cd200r3-209ENSMUST00000166731 3876 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
Ddx56Q9D0R4 Abi3bp-204ENSMUST00000171000 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
Ddx56Q9D0R4 Skint3-201ENSMUST00000038455 3627 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
Ddx56Q9D0R4 AC153150.1-201ENSMUST00000226065 3782 ntBASIC4.18□□□□□ -1.74
Ddx56Q9D0R4 Olfr299-202ENSMUST00000217253 4479 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Ddx56Q9D0R4 Ptprz1-201ENSMUST00000090568 8068 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
Ddx56Q9D0R4 AC154462.1-201ENSMUST00000228897 2260 ntBASIC4.18□□□□□ -1.74
Ddx56Q9D0R4 Oog1-203ENSMUST00000222332 1464 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
Ddx56Q9D0R4 Olfr661-202ENSMUST00000214876 3790 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
Ddx56Q9D0R4 Ccdc73-201ENSMUST00000111114 3944 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
Ddx56Q9D0R4 AC167360.1-201ENSMUST00000222596 2494 ntBASIC4.17□□□□□ -1.74
Ddx56Q9D0R4 Stk31-204ENSMUST00000172459 2922 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
Ddx56Q9D0R4 Olfr1325-202ENSMUST00000216007 3617 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
Ddx56Q9D0R4 Gm4724-201ENSMUST00000109045 1659 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
Ddx56Q9D0R4 Gm26147-201ENSMUST00000104479 114 ntBASIC4.17□□□□□ -1.74
Ddx56Q9D0R4 Gm24855-201ENSMUST00000104848 97 ntBASIC4.17□□□□□ -1.74
Ddx56Q9D0R4 Gm12125-201ENSMUST00000117261 736 ntBASIC4.17□□□□□ -1.74
Ddx56Q9D0R4 Gm12118-201ENSMUST00000119766 532 ntBASIC4.17□□□□□ -1.74
Ddx56Q9D0R4 Spink2-203ENSMUST00000121825 643 ntAPPRIS ALT2 TSL 3 BASIC4.17□□□□□ -1.74
Ddx56Q9D0R4 Gm13852-201ENSMUST00000122350 242 ntBASIC4.17□□□□□ -1.74
Ddx56Q9D0R4 Gm23198-201ENSMUST00000158811 91 ntBASIC4.17□□□□□ -1.74
Ddx56Q9D0R4 Gm24086-201ENSMUST00000175171 98 ntBASIC4.17□□□□□ -1.74
Ddx56Q9D0R4 Fam107b-206ENSMUST00000176254 300 ntTSL 5 BASIC4.17□□□□□ -1.74
Ddx56Q9D0R4 Gm19932-201ENSMUST00000177033 313 ntBASIC4.17□□□□□ -1.74
Ddx56Q9D0R4 Vmn1r-ps9-201ENSMUST00000177047 358 ntBASIC4.17□□□□□ -1.74
Ddx56Q9D0R4 Rpl31-ps18-201ENSMUST00000180885 377 ntBASIC4.17□□□□□ -1.74
Ddx56Q9D0R4 Gm9892-201ENSMUST00000182415 992 ntBASIC4.17□□□□□ -1.74
Ddx56Q9D0R4 Gm27588-201ENSMUST00000185096 263 ntBASIC4.17□□□□□ -1.74
Ddx56Q9D0R4 Gm29591-201ENSMUST00000188215 357 ntTSL 5 BASIC4.17□□□□□ -1.74
Ddx56Q9D0R4 Gm29232-201ENSMUST00000189100 297 ntTSL 5 BASIC4.17□□□□□ -1.74
Ddx56Q9D0R4 Trbv8-201ENSMUST00000194020 285 ntBASIC4.17□□□□□ -1.74
Ddx56Q9D0R4 Gm6135-201ENSMUST00000198726 372 ntTSL 2 BASIC4.17□□□□□ -1.74
Ddx56Q9D0R4 Gm36406-202ENSMUST00000203761 551 ntTSL 5 BASIC4.17□□□□□ -1.74
Ddx56Q9D0R4 Gm45032-201ENSMUST00000205375 520 ntBASIC4.17□□□□□ -1.74
Ddx56Q9D0R4 AC101984.1-201ENSMUST00000219639 402 ntBASIC4.17□□□□□ -1.74
Ddx56Q9D0R4 Gm16419-201ENSMUST00000221057 625 ntBASIC4.17□□□□□ -1.74
Ddx56Q9D0R4 Tgif2lx2-201ENSMUST00000072518 1030 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
Ddx56Q9D0R4 Tgif2lx1-201ENSMUST00000073857 1030 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
Ddx56Q9D0R4 Gm22970-201ENSMUST00000083304 186 ntBASIC4.17□□□□□ -1.74
Ddx56Q9D0R4 Gpr34-202ENSMUST00000096492 1898 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Ddx56Q9D0R4 Dnah12-201ENSMUST00000022433 12009 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
Ddx56Q9D0R4 Gm43663-201ENSMUST00000198643 1505 ntBASIC4.16□□□□□ -1.74
Ddx56Q9D0R4 Olfr1322-202ENSMUST00000217355 3886 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
Ddx56Q9D0R4 Mgat4e-202ENSMUST00000172898 1735 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
Ddx56Q9D0R4 Olfr1104-202ENSMUST00000214857 2693 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
Ddx56Q9D0R4 Mmp1b-201ENSMUST00000047888 1449 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
Ddx56Q9D0R4 Gm26273-201ENSMUST00000104180 131 ntBASIC4.16□□□□□ -1.74
Ddx56Q9D0R4 Gm13343-201ENSMUST00000116474 105 ntBASIC4.16□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 85.1 ms