Protein–RNA interactions for Protein: Q9CWT6

Ddx28, Probable ATP-dependent RNA helicase DDX28, mousemouse

Known RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx28Q9CWT6 Gm23084-201ENSMUST00000157850 114 ntBASIC3.24□□□□□ -1.89
Ddx28Q9CWT6 Pagr1a-201ENSMUST00000162069 422 ntTSL 3 BASIC3.24□□□□□ -1.89
Ddx28Q9CWT6 Snrpe-203ENSMUST00000166291 360 ntTSL 3 BASIC3.24□□□□□ -1.89
Ddx28Q9CWT6 Mir5127-201ENSMUST00000175295 71 ntBASIC3.24□□□□□ -1.89
Ddx28Q9CWT6 Gm27903-201ENSMUST00000175482 126 ntBASIC3.24□□□□□ -1.89
Ddx28Q9CWT6 Gm24315-201ENSMUST00000177835 127 ntBASIC3.24□□□□□ -1.89
Ddx28Q9CWT6 Ighv6-5-201ENSMUST00000179796 297 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
Ddx28Q9CWT6 Gm26189-201ENSMUST00000179879 107 ntBASIC3.24□□□□□ -1.89
Ddx28Q9CWT6 Mir6372-201ENSMUST00000185114 109 ntBASIC3.24□□□□□ -1.89
Ddx28Q9CWT6 1700040F17Rik-201ENSMUST00000187158 817 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
Ddx28Q9CWT6 Gm18296-201ENSMUST00000192475 783 ntBASIC3.24□□□□□ -1.89
Ddx28Q9CWT6 Gm44208-201ENSMUST00000205199 421 ntBASIC3.24□□□□□ -1.89
Ddx28Q9CWT6 AL669916.3-201ENSMUST00000213855 94 ntBASIC3.24□□□□□ -1.89
Ddx28Q9CWT6 AC153971.2-201ENSMUST00000214553 777 ntBASIC3.24□□□□□ -1.89
Ddx28Q9CWT6 AL669916.6-201ENSMUST00000214610 94 ntBASIC3.24□□□□□ -1.89
Ddx28Q9CWT6 AL669916.4-201ENSMUST00000215976 94 ntBASIC3.24□□□□□ -1.89
Ddx28Q9CWT6 Gm3442-201ENSMUST00000216808 710 ntBASIC3.24□□□□□ -1.89
Ddx28Q9CWT6 AL669916.1-201ENSMUST00000217640 94 ntBASIC3.24□□□□□ -1.89
Ddx28Q9CWT6 AC139376.1-201ENSMUST00000220056 1250 ntBASIC3.24□□□□□ -1.89
Ddx28Q9CWT6 AC136976.1-201ENSMUST00000221440 381 ntTSL 3 BASIC3.24□□□□□ -1.89
Ddx28Q9CWT6 AC102291.2-201ENSMUST00000228083 367 ntBASIC3.24□□□□□ -1.89
Ddx28Q9CWT6 AC115291.2-201ENSMUST00000228335 437 ntBASIC3.24□□□□□ -1.89
Ddx28Q9CWT6 Gm23932-201ENSMUST00000082914 107 ntBASIC3.24□□□□□ -1.89
Ddx28Q9CWT6 Gm5416-201ENSMUST00000089628 294 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Ddx28Q9CWT6 Vmn1r178-204ENSMUST00000226640 2282 ntBASIC3.24□□□□□ -1.89
Ddx28Q9CWT6 Gm42547-201ENSMUST00000201159 3798 ntBASIC3.24□□□□□ -1.89
Ddx28Q9CWT6 Olfr1129-203ENSMUST00000214773 2403 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Ddx28Q9CWT6 Olfr913-201ENSMUST00000081095 2441 ntAPPRIS P1 TSL 3 BASIC3.23□□□□□ -1.89
Ddx28Q9CWT6 Gm42870-201ENSMUST00000199355 3470 ntBASIC3.23□□□□□ -1.89
Ddx28Q9CWT6 AC115891.1-201ENSMUST00000215798 1755 ntBASIC3.23□□□□□ -1.89
Ddx28Q9CWT6 Olfr1051-202ENSMUST00000216432 2807 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Ddx28Q9CWT6 Olfr1051-203ENSMUST00000217245 2821 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Ddx28Q9CWT6 Olfr1051-204ENSMUST00000217294 2840 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Ddx28Q9CWT6 Gm15783-201ENSMUST00000117521 633 ntBASIC3.23□□□□□ -1.89
Ddx28Q9CWT6 Gm11704-201ENSMUST00000120031 214 ntBASIC3.23□□□□□ -1.89
Ddx28Q9CWT6 Gm14867-201ENSMUST00000120156 866 ntBASIC3.23□□□□□ -1.89
Ddx28Q9CWT6 Gm25784-201ENSMUST00000122524 81 ntBASIC3.23□□□□□ -1.89
Ddx28Q9CWT6 Gm11280-201ENSMUST00000124912 268 ntTSL 5 BASIC3.23□□□□□ -1.89
Ddx28Q9CWT6 Gm14684-201ENSMUST00000145722 123 ntTSL 5 BASIC3.23□□□□□ -1.89
Ddx28Q9CWT6 Gm17117-201ENSMUST00000163665 299 ntBASIC3.23□□□□□ -1.89
Ddx28Q9CWT6 Gm3370-201ENSMUST00000171785 500 ntBASIC3.23□□□□□ -1.89
Ddx28Q9CWT6 Gm25817-201ENSMUST00000177758 121 ntBASIC3.23□□□□□ -1.89
Ddx28Q9CWT6 Gm24766-201ENSMUST00000179182 121 ntBASIC3.23□□□□□ -1.89
Ddx28Q9CWT6 Gm28010-201ENSMUST00000179485 126 ntBASIC3.23□□□□□ -1.89
Ddx28Q9CWT6 Gm27308-201ENSMUST00000184807 233 ntBASIC3.23□□□□□ -1.89
Ddx28Q9CWT6 Mir6914-201ENSMUST00000184999 69 ntBASIC3.23□□□□□ -1.89
Ddx28Q9CWT6 Gm8197-201ENSMUST00000192906 363 ntTSL 5 BASIC3.23□□□□□ -1.89
Ddx28Q9CWT6 Trbv8-201ENSMUST00000194020 285 ntBASIC3.23□□□□□ -1.89
Ddx28Q9CWT6 Gm29950-201ENSMUST00000195273 237 ntBASIC3.23□□□□□ -1.89
Ddx28Q9CWT6 Gm43617-201ENSMUST00000196418 606 ntTSL 2 BASIC3.23□□□□□ -1.89
Ddx28Q9CWT6 Gm43405-201ENSMUST00000198642 337 ntBASIC3.23□□□□□ -1.89
Ddx28Q9CWT6 Gm44128-201ENSMUST00000204909 219 ntBASIC3.23□□□□□ -1.89
Ddx28Q9CWT6 Gm45366-201ENSMUST00000209828 384 ntBASIC3.23□□□□□ -1.89
Ddx28Q9CWT6 AC152415.1-201ENSMUST00000213320 440 ntBASIC3.23□□□□□ -1.89
Ddx28Q9CWT6 Gm8231-201ENSMUST00000221617 783 ntBASIC3.23□□□□□ -1.89
Ddx28Q9CWT6 AC124569.4-201ENSMUST00000223830 1220 ntBASIC3.23□□□□□ -1.89
Ddx28Q9CWT6 AC168059.2-201ENSMUST00000224473 333 ntBASIC3.23□□□□□ -1.89
Ddx28Q9CWT6 AC154358.1-201ENSMUST00000224871 218 ntBASIC3.23□□□□□ -1.89
Ddx28Q9CWT6 Acrv1-201ENSMUST00000034620 1101 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Ddx28Q9CWT6 Defb4-201ENSMUST00000081017 454 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Ddx28Q9CWT6 Gm42909-201ENSMUST00000196982 3619 ntBASIC3.23□□□□□ -1.89
Ddx28Q9CWT6 Vmn1r66-205ENSMUST00000228622 3304 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Ddx28Q9CWT6 Hormad1-202ENSMUST00000090797 1511 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
Ddx28Q9CWT6 Vmn1r42-203ENSMUST00000227279 4138 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Ddx28Q9CWT6 Olfr17-202ENSMUST00000210568 3666 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Ddx28Q9CWT6 Vmn1r46-203ENSMUST00000226715 10861 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Ddx28Q9CWT6 Vmn1r46-205ENSMUST00000228349 10861 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Ddx28Q9CWT6 Gm44120-201ENSMUST00000203022 3023 ntBASIC3.22□□□□□ -1.89
Ddx28Q9CWT6 Mir466f-3-201ENSMUST00000104788 94 ntBASIC3.22□□□□□ -1.89
Ddx28Q9CWT6 Gm11042-201ENSMUST00000110441 120 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Ddx28Q9CWT6 Gm25507-201ENSMUST00000116981 144 ntBASIC3.22□□□□□ -1.89
Ddx28Q9CWT6 Gm14428-201ENSMUST00000120408 822 ntBASIC3.22□□□□□ -1.89
Ddx28Q9CWT6 Gm14766-201ENSMUST00000121689 367 ntBASIC3.22□□□□□ -1.89
Ddx28Q9CWT6 Gm14411-201ENSMUST00000121798 914 ntBASIC3.22□□□□□ -1.89
Ddx28Q9CWT6 n-R5s207-201ENSMUST00000122497 118 ntBASIC3.22□□□□□ -1.89
Ddx28Q9CWT6 Gm16101-201ENSMUST00000160695 430 ntBASIC3.22□□□□□ -1.89
Ddx28Q9CWT6 Cfap54-204ENSMUST00000164979 945 ntTSL 5 BASIC3.22□□□□□ -1.89
Ddx28Q9CWT6 Gm8267-202ENSMUST00000169062 1240 ntAPPRIS P2 TSL 5 BASIC3.22□□□□□ -1.89
Ddx28Q9CWT6 Gm23415-201ENSMUST00000175519 83 ntBASIC3.22□□□□□ -1.89
Ddx28Q9CWT6 Gm22367-201ENSMUST00000178930 132 ntBASIC3.22□□□□□ -1.89
Ddx28Q9CWT6 Mir6541-201ENSMUST00000183649 110 ntBASIC3.22□□□□□ -1.89
Ddx28Q9CWT6 Gm27599-201ENSMUST00000183758 174 ntBASIC3.22□□□□□ -1.89
Ddx28Q9CWT6 Gm27773-201ENSMUST00000184087 78 ntBASIC3.22□□□□□ -1.89
Ddx28Q9CWT6 Obox4-ps39-201ENSMUST00000184306 628 ntBASIC3.22□□□□□ -1.89
Ddx28Q9CWT6 Gm27392-201ENSMUST00000185041 101 ntBASIC3.22□□□□□ -1.89
Ddx28Q9CWT6 Rpl23a-ps10-201ENSMUST00000185511 462 ntBASIC3.22□□□□□ -1.89
Ddx28Q9CWT6 Gm28148-201ENSMUST00000186924 697 ntBASIC3.22□□□□□ -1.89
Ddx28Q9CWT6 Gm28954-201ENSMUST00000190031 437 ntTSL 5 BASIC3.22□□□□□ -1.89
Ddx28Q9CWT6 Gm31942-202ENSMUST00000195375 437 ntTSL 5 BASIC3.22□□□□□ -1.89
Ddx28Q9CWT6 Gm43731-201ENSMUST00000196150 666 ntTSL 3 BASIC3.22□□□□□ -1.89
Ddx28Q9CWT6 1700108N06Rik-201ENSMUST00000196572 681 ntTSL 5 BASIC3.22□□□□□ -1.89
Ddx28Q9CWT6 4930437M23Rik-201ENSMUST00000197456 968 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
Ddx28Q9CWT6 1700042D02Rik-201ENSMUST00000198232 389 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
Ddx28Q9CWT6 Gm43358-201ENSMUST00000199217 970 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
Ddx28Q9CWT6 Gm43131-201ENSMUST00000200042 969 ntTSL 5 BASIC3.22□□□□□ -1.89
Ddx28Q9CWT6 Gm36816-202ENSMUST00000205197 504 ntTSL 5 BASIC3.22□□□□□ -1.89
Ddx28Q9CWT6 Gm45232-201ENSMUST00000207811 162 ntBASIC3.22□□□□□ -1.89
Ddx28Q9CWT6 Gm45327-201ENSMUST00000211612 565 ntBASIC3.22□□□□□ -1.89
Ddx28Q9CWT6 Gm37797-201ENSMUST00000212114 815 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Ddx28Q9CWT6 AC117688.1-201ENSMUST00000213142 832 ntTSL 5 BASIC3.22□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 136.9 ms