Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Gm38083-201ENSMUST00000194758 3498 ntBASIC3.38□□□□□ -1.87
Smc1aQ9CU62 Gm5141-202ENSMUST00000201047 3279 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Smc1aQ9CU62 Zfp40-206ENSMUST00000172177 2736 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Smc1aQ9CU62 Fam81b-201ENSMUST00000208418 2760 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Smc1aQ9CU62 Olfr104-ps-202ENSMUST00000215398 2771 ntAPPRIS P5 TSL 5 BASIC3.37□□□□□ -1.87
Smc1aQ9CU62 Zfp987-201ENSMUST00000091878 2798 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
Smc1aQ9CU62 Vmn1r13-204ENSMUST00000227421 5235 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Smc1aQ9CU62 Vmn1r46-206ENSMUST00000228401 10955 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Smc1aQ9CU62 Gm20345-201ENSMUST00000175839 2414 ntBASIC3.37□□□□□ -1.87
Smc1aQ9CU62 Vmn1r3-201ENSMUST00000105159 1011 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Smc1aQ9CU62 Zfp972-203ENSMUST00000108986 192 ntTSL 5 BASIC3.37□□□□□ -1.87
Smc1aQ9CU62 Rps24-201ENSMUST00000112384 468 ntAPPRIS ALT1 TSL 5 BASIC3.37□□□□□ -1.87
Smc1aQ9CU62 Gm14877-201ENSMUST00000119803 478 ntBASIC3.37□□□□□ -1.87
Smc1aQ9CU62 Gm7071-201ENSMUST00000120458 462 ntBASIC3.37□□□□□ -1.87
Smc1aQ9CU62 Gm14713-201ENSMUST00000122362 686 ntBASIC3.37□□□□□ -1.87
Smc1aQ9CU62 Rab7b-203ENSMUST00000129905 476 ntTSL 2 BASIC3.37□□□□□ -1.87
Smc1aQ9CU62 Klrc1-204ENSMUST00000169545 676 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
Smc1aQ9CU62 Gm18520-201ENSMUST00000174783 658 ntBASIC3.37□□□□□ -1.87
Smc1aQ9CU62 1810044D09Rik-201ENSMUST00000186472 486 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
Smc1aQ9CU62 Gm38281-201ENSMUST00000192301 315 ntBASIC3.37□□□□□ -1.87
Smc1aQ9CU62 Igkv5-40-1-201ENSMUST00000196457 359 ntBASIC3.37□□□□□ -1.87
Smc1aQ9CU62 Gm36831-201ENSMUST00000196485 631 ntTSL 2 BASIC3.37□□□□□ -1.87
Smc1aQ9CU62 Gm44058-201ENSMUST00000204335 467 ntBASIC3.37□□□□□ -1.87
Smc1aQ9CU62 Gm45400-201ENSMUST00000211603 653 ntBASIC3.37□□□□□ -1.87
Smc1aQ9CU62 AC113305.1-201ENSMUST00000214664 724 ntBASIC3.37□□□□□ -1.87
Smc1aQ9CU62 Gm18557-201ENSMUST00000218710 433 ntBASIC3.37□□□□□ -1.87
Smc1aQ9CU62 Gm3333-202ENSMUST00000221763 1044 ntBASIC3.37□□□□□ -1.87
Smc1aQ9CU62 AC166369.3-201ENSMUST00000227286 409 ntBASIC3.37□□□□□ -1.87
Smc1aQ9CU62 Olfr802-201ENSMUST00000074713 939 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Smc1aQ9CU62 Gm10038-201ENSMUST00000077233 441 ntBASIC3.37□□□□□ -1.87
Smc1aQ9CU62 Olfr295-201ENSMUST00000078447 930 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Smc1aQ9CU62 Gm24254-201ENSMUST00000083702 104 ntBASIC3.37□□□□□ -1.87
Smc1aQ9CU62 Olfr1099-201ENSMUST00000099871 1031 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Smc1aQ9CU62 Rag2-201ENSMUST00000044031 3424 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
Smc1aQ9CU62 Vmn1r13-203ENSMUST00000227298 5203 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Smc1aQ9CU62 Gm37236-201ENSMUST00000193670 3249 ntBASIC3.36□□□□□ -1.87
Smc1aQ9CU62 Gm24068-201ENSMUST00000104513 132 ntBASIC3.36□□□□□ -1.87
Smc1aQ9CU62 Gm14987-201ENSMUST00000117820 676 ntBASIC3.36□□□□□ -1.87
Smc1aQ9CU62 Gm14669-201ENSMUST00000118841 250 ntBASIC3.36□□□□□ -1.87
Smc1aQ9CU62 Gm12706-201ENSMUST00000121588 698 ntBASIC3.36□□□□□ -1.87
Smc1aQ9CU62 Gm15961-201ENSMUST00000156090 266 ntTSL 3 BASIC3.36□□□□□ -1.87
Smc1aQ9CU62 Gm26277-201ENSMUST00000157097 152 ntBASIC3.36□□□□□ -1.87
Smc1aQ9CU62 Gm25666-201ENSMUST00000157702 107 ntBASIC3.36□□□□□ -1.87
Smc1aQ9CU62 Gm24213-201ENSMUST00000158255 258 ntBASIC3.36□□□□□ -1.87
Smc1aQ9CU62 Arpp19-211ENSMUST00000170310 899 ntTSL 3 BASIC3.36□□□□□ -1.87
Smc1aQ9CU62 Vmn2r-ps76-201ENSMUST00000173876 739 ntBASIC3.36□□□□□ -1.87
Smc1aQ9CU62 Gm26297-201ENSMUST00000179464 132 ntBASIC3.36□□□□□ -1.87
Smc1aQ9CU62 Gm8649-201ENSMUST00000181799 233 ntBASIC3.36□□□□□ -1.87
Smc1aQ9CU62 Gm6651-201ENSMUST00000189471 271 ntBASIC3.36□□□□□ -1.87
Smc1aQ9CU62 Gm28466-201ENSMUST00000190678 659 ntBASIC3.36□□□□□ -1.87
Smc1aQ9CU62 Gm6321-201ENSMUST00000194460 1090 ntBASIC3.36□□□□□ -1.87
Smc1aQ9CU62 Gm44072-201ENSMUST00000203666 383 ntTSL 3 BASIC3.36□□□□□ -1.87
Smc1aQ9CU62 Gm44425-201ENSMUST00000203739 429 ntBASIC3.36□□□□□ -1.87
Smc1aQ9CU62 Gm44988-201ENSMUST00000203835 1161 ntBASIC3.36□□□□□ -1.87
Smc1aQ9CU62 Gm44061-201ENSMUST00000203962 1195 ntBASIC3.36□□□□□ -1.87
Smc1aQ9CU62 Gm44049-201ENSMUST00000204905 2984 ntBASIC3.36□□□□□ -1.87
Smc1aQ9CU62 CT010455.1-201ENSMUST00000218579 413 ntBASIC3.36□□□□□ -1.87
Smc1aQ9CU62 Gm31849-201ENSMUST00000220306 375 ntBASIC3.36□□□□□ -1.87
Smc1aQ9CU62 Gm10088-201ENSMUST00000074116 423 ntBASIC3.36□□□□□ -1.87
Smc1aQ9CU62 Olfr1462-201ENSMUST00000076832 924 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Smc1aQ9CU62 Gm23932-201ENSMUST00000082914 107 ntBASIC3.36□□□□□ -1.87
Smc1aQ9CU62 Olfr1002-201ENSMUST00000099920 957 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Smc1aQ9CU62 Olfr59-204ENSMUST00000214048 3363 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
Smc1aQ9CU62 Fnd3c2-201ENSMUST00000091282 3662 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Smc1aQ9CU62 Olfr747-204ENSMUST00000213238 1416 ntAPPRIS P1 TSL 3 BASIC3.36□□□□□ -1.87
Smc1aQ9CU62 Gm43875-201ENSMUST00000203319 2475 ntBASIC3.35□□□□□ -1.87
Smc1aQ9CU62 Gm21032-201ENSMUST00000208108 2578 ntBASIC3.35□□□□□ -1.87
Smc1aQ9CU62 Gm5483-201ENSMUST00000114858 414 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Smc1aQ9CU62 Gm14901-201ENSMUST00000119001 283 ntBASIC3.35□□□□□ -1.87
Smc1aQ9CU62 Gm12793-201ENSMUST00000119268 292 ntBASIC3.35□□□□□ -1.87
Smc1aQ9CU62 Gm12213-201ENSMUST00000119924 353 ntBASIC3.35□□□□□ -1.87
Smc1aQ9CU62 Gm14898-201ENSMUST00000120202 645 ntBASIC3.35□□□□□ -1.87
Smc1aQ9CU62 Gm13656-201ENSMUST00000123829 345 ntTSL 3 BASIC3.35□□□□□ -1.87
Smc1aQ9CU62 Gm13775-201ENSMUST00000153865 751 ntTSL 3 BASIC3.35□□□□□ -1.87
Smc1aQ9CU62 Gm25557-201ENSMUST00000158084 315 ntBASIC3.35□□□□□ -1.87
Smc1aQ9CU62 Gm17224-201ENSMUST00000171429 500 ntTSL 3 BASIC3.35□□□□□ -1.87
Smc1aQ9CU62 Igkv13-82-201ENSMUST00000200308 346 ntBASIC3.35□□□□□ -1.87
Smc1aQ9CU62 Gm17838-201ENSMUST00000205872 876 ntBASIC3.35□□□□□ -1.87
Smc1aQ9CU62 Olfr861-ps1-201ENSMUST00000212783 928 ntBASIC3.35□□□□□ -1.87
Smc1aQ9CU62 Gm19709-201ENSMUST00000215403 482 ntBASIC3.35□□□□□ -1.87
Smc1aQ9CU62 Gm30534-201ENSMUST00000217928 207 ntBASIC3.35□□□□□ -1.87
Smc1aQ9CU62 AC159188.1-201ENSMUST00000225198 526 ntBASIC3.35□□□□□ -1.87
Smc1aQ9CU62 AC124569.1-201ENSMUST00000225932 101 ntBASIC3.35□□□□□ -1.87
Smc1aQ9CU62 AC158395.1-201ENSMUST00000227206 452 ntBASIC3.35□□□□□ -1.87
Smc1aQ9CU62 AC121114.1-201ENSMUST00000228522 570 ntBASIC3.35□□□□□ -1.87
Smc1aQ9CU62 Gm25202-201ENSMUST00000082838 191 ntBASIC3.35□□□□□ -1.87
Smc1aQ9CU62 Olfr895-201ENSMUST00000093864 951 ntBASIC3.35□□□□□ -1.87
Smc1aQ9CU62 Olfr1270-204ENSMUST00000215975 4854 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Smc1aQ9CU62 Vmn2r66-201ENSMUST00000124773 2556 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Smc1aQ9CU62 Vmn1r172-202ENSMUST00000173101 9109 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Smc1aQ9CU62 Olfr597-202ENSMUST00000216456 2727 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Smc1aQ9CU62 Tlr3-202ENSMUST00000167106 4093 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
Smc1aQ9CU62 Olfr196-202ENSMUST00000205471 1711 ntAPPRIS P1 TSL 3 BASIC3.34□□□□□ -1.87
Smc1aQ9CU62 Gm3234-202ENSMUST00000223301 3250 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Smc1aQ9CU62 Gm7853-201ENSMUST00000100708 478 ntBASIC3.34□□□□□ -1.87
Smc1aQ9CU62 Gm22658-201ENSMUST00000104196 155 ntBASIC3.34□□□□□ -1.87
Smc1aQ9CU62 Gm13454-201ENSMUST00000118166 483 ntBASIC3.34□□□□□ -1.87
Smc1aQ9CU62 Gm8260-201ENSMUST00000119230 353 ntBASIC3.34□□□□□ -1.87
Smc1aQ9CU62 Gm12478-201ENSMUST00000127709 353 ntTSL 5 BASIC3.34□□□□□ -1.87
Smc1aQ9CU62 Gm12729-201ENSMUST00000130088 624 ntTSL 3 BASIC3.34□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 100.5 ms