Protein–RNA interactions for Protein: Q9CR29

Ccdc43, Coiled-coil domain-containing protein 43, mousemouse

Known RBP Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc43Q9CR29 Vmn1r-ps10-201ENSMUST00000176165 889 ntBASIC3.38□□□□□ -1.87
Ccdc43Q9CR29 Gm22367-201ENSMUST00000178930 132 ntBASIC3.38□□□□□ -1.87
Ccdc43Q9CR29 Gm45687-201ENSMUST00000209454 155 ntBASIC3.38□□□□□ -1.87
Ccdc43Q9CR29 Olfr484-201ENSMUST00000210881 1098 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Ccdc43Q9CR29 S100z-201ENSMUST00000022186 399 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Ccdc43Q9CR29 AC161758.1-201ENSMUST00000226123 310 ntBASIC3.38□□□□□ -1.87
Ccdc43Q9CR29 Olfr474-201ENSMUST00000054434 933 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Ccdc43Q9CR29 Defb9-201ENSMUST00000057076 310 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Ccdc43Q9CR29 Olfr619-201ENSMUST00000098196 1124 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Ccdc43Q9CR29 Gpr174-201ENSMUST00000101294 4614 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Ccdc43Q9CR29 Zfp984-201ENSMUST00000105734 2729 ntAPPRIS P1 TSL 3 BASIC3.38□□□□□ -1.87
Ccdc43Q9CR29 Btbd35f3-201ENSMUST00000140300 1943 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Ccdc43Q9CR29 A930027P06Rik-201ENSMUST00000221298 2975 ntBASIC3.38□□□□□ -1.87
Ccdc43Q9CR29 Gm7073-202ENSMUST00000166562 1369 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Ccdc43Q9CR29 Ranbp2-201ENSMUST00000003310 9608 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Ccdc43Q9CR29 Gm44679-201ENSMUST00000207202 2908 ntBASIC3.37□□□□□ -1.87
Ccdc43Q9CR29 Gm44601-201ENSMUST00000206678 2720 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
Ccdc43Q9CR29 Zfp987-201ENSMUST00000091878 2798 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
Ccdc43Q9CR29 Gm45262-201ENSMUST00000209917 1463 ntBASIC3.37□□□□□ -1.87
Ccdc43Q9CR29 Olfr789-202ENSMUST00000213992 4421 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Ccdc43Q9CR29 Gm7853-201ENSMUST00000100708 478 ntBASIC3.37□□□□□ -1.87
Ccdc43Q9CR29 Gm24118-201ENSMUST00000103972 126 ntBASIC3.37□□□□□ -1.87
Ccdc43Q9CR29 Gm13329-201ENSMUST00000117063 265 ntBASIC3.37□□□□□ -1.87
Ccdc43Q9CR29 Gm15399-201ENSMUST00000118055 724 ntBASIC3.37□□□□□ -1.87
Ccdc43Q9CR29 Gm14101-201ENSMUST00000121502 473 ntBASIC3.37□□□□□ -1.87
Ccdc43Q9CR29 Gm25807-201ENSMUST00000122783 305 ntBASIC3.37□□□□□ -1.87
Ccdc43Q9CR29 Gm12505-201ENSMUST00000146041 757 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
Ccdc43Q9CR29 4933406D12Rik-201ENSMUST00000147212 737 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
Ccdc43Q9CR29 Gm16354-201ENSMUST00000155376 150 ntBASIC3.37□□□□□ -1.87
Ccdc43Q9CR29 Gm24730-201ENSMUST00000158228 117 ntBASIC3.37□□□□□ -1.87
Ccdc43Q9CR29 Vmn1r139-201ENSMUST00000169730 894 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Ccdc43Q9CR29 Vmn1r112-201ENSMUST00000174538 894 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Ccdc43Q9CR29 Vmn1r157-201ENSMUST00000178215 894 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Ccdc43Q9CR29 Gm8676-201ENSMUST00000184206 637 ntBASIC3.37□□□□□ -1.87
Ccdc43Q9CR29 Gm19224-201ENSMUST00000190477 793 ntBASIC3.37□□□□□ -1.87
Ccdc43Q9CR29 Ighv3-7-201ENSMUST00000193370 348 ntBASIC3.37□□□□□ -1.87
Ccdc43Q9CR29 Igkv8-31-201ENSMUST00000200040 372 ntBASIC3.37□□□□□ -1.87
Ccdc43Q9CR29 Gm36776-201ENSMUST00000207006 203 ntBASIC3.37□□□□□ -1.87
Ccdc43Q9CR29 AC158798.1-201ENSMUST00000219714 711 ntTSL 5 BASIC3.37□□□□□ -1.87
Ccdc43Q9CR29 n-R5s166-201ENSMUST00000082898 121 ntBASIC3.37□□□□□ -1.87
Ccdc43Q9CR29 Vmn1r132-201ENSMUST00000098736 894 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Ccdc43Q9CR29 Olfr235-203ENSMUST00000214551 2240 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Ccdc43Q9CR29 Olfr509-204ENSMUST00000215075 3418 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Ccdc43Q9CR29 Olfr924-202ENSMUST00000217350 3431 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Ccdc43Q9CR29 Gm2066-201ENSMUST00000118046 389 ntBASIC3.36□□□□□ -1.87
Ccdc43Q9CR29 Gm2318-201ENSMUST00000119623 639 ntBASIC3.36□□□□□ -1.87
Ccdc43Q9CR29 Defa-ps5-201ENSMUST00000121541 279 ntBASIC3.36□□□□□ -1.87
Ccdc43Q9CR29 Gm12693-201ENSMUST00000121965 483 ntBASIC3.36□□□□□ -1.87
Ccdc43Q9CR29 Gm11819-201ENSMUST00000122192 372 ntBASIC3.36□□□□□ -1.87
Ccdc43Q9CR29 Gm11816-201ENSMUST00000142744 353 ntTSL 3 BASIC3.36□□□□□ -1.87
Ccdc43Q9CR29 Gm24959-201ENSMUST00000157924 146 ntBASIC3.36□□□□□ -1.87
Ccdc43Q9CR29 Gm17154-201ENSMUST00000165748 431 ntBASIC3.36□□□□□ -1.87
Ccdc43Q9CR29 Gm5168-202ENSMUST00000168002 636 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Ccdc43Q9CR29 Gm20672-201ENSMUST00000176605 261 ntBASIC3.36□□□□□ -1.87
Ccdc43Q9CR29 Gm7438-201ENSMUST00000177664 639 ntBASIC3.36□□□□□ -1.87
Ccdc43Q9CR29 Gm7408-201ENSMUST00000178014 639 ntBASIC3.36□□□□□ -1.87
Ccdc43Q9CR29 Gm7386-201ENSMUST00000178020 639 ntBASIC3.36□□□□□ -1.87
Ccdc43Q9CR29 Gm3657-201ENSMUST00000178170 639 ntBASIC3.36□□□□□ -1.87
Ccdc43Q9CR29 Gm7415-201ENSMUST00000178205 639 ntBASIC3.36□□□□□ -1.87
Ccdc43Q9CR29 Gm7398-201ENSMUST00000178589 639 ntBASIC3.36□□□□□ -1.87
Ccdc43Q9CR29 Gm7391-201ENSMUST00000178680 639 ntBASIC3.36□□□□□ -1.87
Ccdc43Q9CR29 Gm5935-202ENSMUST00000178986 639 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Ccdc43Q9CR29 Gm7375-201ENSMUST00000179232 639 ntBASIC3.36□□□□□ -1.87
Ccdc43Q9CR29 Gm3681-201ENSMUST00000179940 639 ntBASIC3.36□□□□□ -1.87
Ccdc43Q9CR29 Gm17916-203ENSMUST00000189918 324 ntTSL 5 BASIC3.36□□□□□ -1.87
Ccdc43Q9CR29 Gm44824-201ENSMUST00000207021 229 ntBASIC3.36□□□□□ -1.87
Ccdc43Q9CR29 Gm45105-201ENSMUST00000207824 397 ntBASIC3.36□□□□□ -1.87
Ccdc43Q9CR29 Gm18414-201ENSMUST00000210858 694 ntBASIC3.36□□□□□ -1.87
Ccdc43Q9CR29 AC172751.1-201ENSMUST00000226887 440 ntBASIC3.36□□□□□ -1.87
Ccdc43Q9CR29 Gm5168-201ENSMUST00000089165 824 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Ccdc43Q9CR29 Gm16436-201ENSMUST00000121510 1607 ntBASIC3.36□□□□□ -1.87
Ccdc43Q9CR29 Gm43326-201ENSMUST00000198459 1638 ntBASIC3.36□□□□□ -1.87
Ccdc43Q9CR29 Vmn1r13-204ENSMUST00000227421 5235 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Ccdc43Q9CR29 Gm37320-201ENSMUST00000192781 4953 ntBASIC3.35□□□□□ -1.87
Ccdc43Q9CR29 Gm44625-201ENSMUST00000207838 1561 ntBASIC3.35□□□□□ -1.87
Ccdc43Q9CR29 Krtap24-1-201ENSMUST00000052512 1571 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Ccdc43Q9CR29 Gm14020-201ENSMUST00000118165 662 ntBASIC3.35□□□□□ -1.87
Ccdc43Q9CR29 Rpl36a-ps3-201ENSMUST00000120093 321 ntBASIC3.35□□□□□ -1.87
Ccdc43Q9CR29 Gm14867-201ENSMUST00000120156 866 ntBASIC3.35□□□□□ -1.87
Ccdc43Q9CR29 Gm2768-201ENSMUST00000121062 250 ntBASIC3.35□□□□□ -1.87
Ccdc43Q9CR29 Gm12095-201ENSMUST00000121962 816 ntBASIC3.35□□□□□ -1.87
Ccdc43Q9CR29 Gm12478-201ENSMUST00000127709 353 ntTSL 5 BASIC3.35□□□□□ -1.87
Ccdc43Q9CR29 Gm12238-201ENSMUST00000127764 124 ntBASIC3.35□□□□□ -1.87
Ccdc43Q9CR29 Platr16-202ENSMUST00000150529 545 ntTSL 3 BASIC3.35□□□□□ -1.87
Ccdc43Q9CR29 Rpl30-ps6-201ENSMUST00000163337 348 ntBASIC3.35□□□□□ -1.87
Ccdc43Q9CR29 Gm25874-201ENSMUST00000178030 79 ntBASIC3.35□□□□□ -1.87
Ccdc43Q9CR29 Gm23648-201ENSMUST00000180301 107 ntBASIC3.35□□□□□ -1.87
Ccdc43Q9CR29 Gm27869-201ENSMUST00000184327 122 ntBASIC3.35□□□□□ -1.87
Ccdc43Q9CR29 Gm18448-201ENSMUST00000186286 599 ntBASIC3.35□□□□□ -1.87
Ccdc43Q9CR29 Gm19066-201ENSMUST00000193232 1078 ntBASIC3.35□□□□□ -1.87
Ccdc43Q9CR29 Gm37085-201ENSMUST00000193780 196 ntBASIC3.35□□□□□ -1.87
Ccdc43Q9CR29 A930014E01Rik-201ENSMUST00000194572 330 ntBASIC3.35□□□□□ -1.87
Ccdc43Q9CR29 2900064F13Rik-201ENSMUST00000202166 1008 ntBASIC3.35□□□□□ -1.87
Ccdc43Q9CR29 AC113305.1-201ENSMUST00000214664 724 ntBASIC3.35□□□□□ -1.87
Ccdc43Q9CR29 Olfr274-ps1-201ENSMUST00000216601 595 ntBASIC3.35□□□□□ -1.87
Ccdc43Q9CR29 Gm46233-201ENSMUST00000217831 449 ntBASIC3.35□□□□□ -1.87
Ccdc43Q9CR29 AC147639.1-201ENSMUST00000224216 661 ntBASIC3.35□□□□□ -1.87
Ccdc43Q9CR29 AC107757.3-201ENSMUST00000226312 535 ntBASIC3.35□□□□□ -1.87
Ccdc43Q9CR29 AC118639.1-201ENSMUST00000227204 338 ntBASIC3.35□□□□□ -1.87
Ccdc43Q9CR29 AC125464.1-201ENSMUST00000228013 512 ntBASIC3.35□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 87.9 ms