Protein–RNA interactions for Protein: Q91XX8

Pcdhgb1, Protocadherin gamma B1, mousemouse

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb1Q91XX8 9330159F19Rik-201ENSMUST00000092627 5681 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Pcdhgb1Q91XX8 Cngb3-201ENSMUST00000102999 4708 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Pcdhgb1Q91XX8 Fbxw16-201ENSMUST00000084984 1497 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Pcdhgb1Q91XX8 Gm15127-203ENSMUST00000112753 1950 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
Pcdhgb1Q91XX8 Gm22497-201ENSMUST00000104499 131 ntBASIC3.55□□□□□ -1.84
Pcdhgb1Q91XX8 Gm23609-201ENSMUST00000104542 127 ntBASIC3.55□□□□□ -1.84
Pcdhgb1Q91XX8 Vmn1r2-201ENSMUST00000105160 921 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
Pcdhgb1Q91XX8 Gm13614-201ENSMUST00000117306 503 ntBASIC3.55□□□□□ -1.84
Pcdhgb1Q91XX8 Gm13803-201ENSMUST00000117547 489 ntBASIC3.55□□□□□ -1.84
Pcdhgb1Q91XX8 Gm14624-201ENSMUST00000117746 192 ntBASIC3.55□□□□□ -1.84
Pcdhgb1Q91XX8 Rhox11-ps2-201ENSMUST00000117962 451 ntBASIC3.55□□□□□ -1.84
Pcdhgb1Q91XX8 Gm12509-201ENSMUST00000118033 609 ntBASIC3.55□□□□□ -1.84
Pcdhgb1Q91XX8 Gm14359-201ENSMUST00000118883 424 ntBASIC3.55□□□□□ -1.84
Pcdhgb1Q91XX8 Gm14411-201ENSMUST00000121798 914 ntBASIC3.55□□□□□ -1.84
Pcdhgb1Q91XX8 Gm9498-201ENSMUST00000140849 291 ntBASIC3.55□□□□□ -1.84
Pcdhgb1Q91XX8 Gm24060-201ENSMUST00000157494 95 ntBASIC3.55□□□□□ -1.84
Pcdhgb1Q91XX8 Gm22836-201ENSMUST00000158441 61 ntBASIC3.55□□□□□ -1.84
Pcdhgb1Q91XX8 Gm15946-201ENSMUST00000160654 423 ntBASIC3.55□□□□□ -1.84
Pcdhgb1Q91XX8 Gm16101-201ENSMUST00000160695 430 ntBASIC3.55□□□□□ -1.84
Pcdhgb1Q91XX8 Smim9-203ENSMUST00000165080 414 ntAPPRIS P1 TSL 3 BASIC3.55□□□□□ -1.84
Pcdhgb1Q91XX8 Snord92-201ENSMUST00000175548 85 ntBASIC3.55□□□□□ -1.84
Pcdhgb1Q91XX8 Gm21518-201ENSMUST00000178115 567 ntTSL 5 BASIC3.55□□□□□ -1.84
Pcdhgb1Q91XX8 Gm20736-201ENSMUST00000178198 567 ntTSL 5 BASIC3.55□□□□□ -1.84
Pcdhgb1Q91XX8 Gm20843-201ENSMUST00000178505 567 ntTSL 5 BASIC3.55□□□□□ -1.84
Pcdhgb1Q91XX8 Gm21209-201ENSMUST00000178556 567 ntTSL 5 BASIC3.55□□□□□ -1.84
Pcdhgb1Q91XX8 Gm21258-201ENSMUST00000178673 567 ntTSL 5 BASIC3.55□□□□□ -1.84
Pcdhgb1Q91XX8 Gm21650-201ENSMUST00000179073 567 ntTSL 5 BASIC3.55□□□□□ -1.84
Pcdhgb1Q91XX8 Gm20937-201ENSMUST00000180329 567 ntTSL 5 BASIC3.55□□□□□ -1.84
Pcdhgb1Q91XX8 Gm27957-201ENSMUST00000184054 127 ntBASIC3.55□□□□□ -1.84
Pcdhgb1Q91XX8 Gm27445-201ENSMUST00000184484 72 ntBASIC3.55□□□□□ -1.84
Pcdhgb1Q91XX8 Gm28030-201ENSMUST00000184987 138 ntBASIC3.55□□□□□ -1.84
Pcdhgb1Q91XX8 Gm20832-201ENSMUST00000189076 665 ntBASIC3.55□□□□□ -1.84
Pcdhgb1Q91XX8 1700025M24Rik-203ENSMUST00000191524 725 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
Pcdhgb1Q91XX8 Trbv12-3-201ENSMUST00000192675 372 ntBASIC3.55□□□□□ -1.84
Pcdhgb1Q91XX8 Gm18403-201ENSMUST00000192907 529 ntBASIC3.55□□□□□ -1.84
Pcdhgb1Q91XX8 Gm34015-201ENSMUST00000194908 451 ntBASIC3.55□□□□□ -1.84
Pcdhgb1Q91XX8 Gm30638-201ENSMUST00000195570 656 ntBASIC3.55□□□□□ -1.84
Pcdhgb1Q91XX8 Gm36728-201ENSMUST00000195782 665 ntBASIC3.55□□□□□ -1.84
Pcdhgb1Q91XX8 Gm42621-201ENSMUST00000198114 275 ntBASIC3.55□□□□□ -1.84
Pcdhgb1Q91XX8 Gm43109-201ENSMUST00000198269 753 ntTSL 3 BASIC3.55□□□□□ -1.84
Pcdhgb1Q91XX8 Smr2-204ENSMUST00000199635 680 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
Pcdhgb1Q91XX8 Gm44125-201ENSMUST00000203068 448 ntBASIC3.55□□□□□ -1.84
Pcdhgb1Q91XX8 Gm44274-201ENSMUST00000203417 256 ntBASIC3.55□□□□□ -1.84
Pcdhgb1Q91XX8 Gm44071-201ENSMUST00000204180 448 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
Pcdhgb1Q91XX8 Gm5485-201ENSMUST00000212197 628 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Pcdhgb1Q91XX8 Gm46124-201ENSMUST00000215223 808 ntTSL 5 BASIC3.55□□□□□ -1.84
Pcdhgb1Q91XX8 AC155929.1-201ENSMUST00000220217 1276 ntBASIC3.55□□□□□ -1.84
Pcdhgb1Q91XX8 AC164117.2-201ENSMUST00000222090 327 ntBASIC3.55□□□□□ -1.84
Pcdhgb1Q91XX8 AC144628.1-201ENSMUST00000227943 466 ntBASIC3.55□□□□□ -1.84
Pcdhgb1Q91XX8 Defb8-201ENSMUST00000033854 287 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Pcdhgb1Q91XX8 Vmn1r79-201ENSMUST00000062811 921 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
Pcdhgb1Q91XX8 Olfr967-201ENSMUST00000069561 933 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
Pcdhgb1Q91XX8 mt-Tr-201ENSMUST00000082412 68 ntBASIC3.55□□□□□ -1.84
Pcdhgb1Q91XX8 Gm24622-201ENSMUST00000082619 162 ntBASIC3.55□□□□□ -1.84
Pcdhgb1Q91XX8 Gm22304-201ENSMUST00000082688 129 ntBASIC3.55□□□□□ -1.84
Pcdhgb1Q91XX8 Gm22810-201ENSMUST00000082741 158 ntBASIC3.55□□□□□ -1.84
Pcdhgb1Q91XX8 Snord35b-201ENSMUST00000082833 87 ntBASIC3.55□□□□□ -1.84
Pcdhgb1Q91XX8 Gm23939-201ENSMUST00000082880 133 ntBASIC3.55□□□□□ -1.84
Pcdhgb1Q91XX8 Gm25126-201ENSMUST00000083343 102 ntBASIC3.55□□□□□ -1.84
Pcdhgb1Q91XX8 Ak6-202ENSMUST00000084721 1222 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
Pcdhgb1Q91XX8 Olfr1037-204ENSMUST00000216886 1755 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Pcdhgb1Q91XX8 Gm37494-202ENSMUST00000188038 16021 ntTSL 5 BASIC3.55□□□□□ -1.84
Pcdhgb1Q91XX8 Olfr194-202ENSMUST00000213228 3668 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Pcdhgb1Q91XX8 Gm43047-201ENSMUST00000200089 3460 ntBASIC3.54□□□□□ -1.84
Pcdhgb1Q91XX8 Wfdc18-201ENSMUST00000001009 521 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Pcdhgb1Q91XX8 Gm25563-201ENSMUST00000104603 74 ntBASIC3.54□□□□□ -1.84
Pcdhgb1Q91XX8 Gm14622-201ENSMUST00000117117 468 ntBASIC3.54□□□□□ -1.84
Pcdhgb1Q91XX8 Gm14973-201ENSMUST00000117248 255 ntBASIC3.54□□□□□ -1.84
Pcdhgb1Q91XX8 Gm12805-201ENSMUST00000117305 1048 ntBASIC3.54□□□□□ -1.84
Pcdhgb1Q91XX8 Gm12025-201ENSMUST00000117768 144 ntBASIC3.54□□□□□ -1.84
Pcdhgb1Q91XX8 Gm11367-201ENSMUST00000117802 120 ntBASIC3.54□□□□□ -1.84
Pcdhgb1Q91XX8 Gm14681-201ENSMUST00000118047 411 ntBASIC3.54□□□□□ -1.84
Pcdhgb1Q91XX8 Gm14008-201ENSMUST00000120483 274 ntBASIC3.54□□□□□ -1.84
Pcdhgb1Q91XX8 Gm15177-201ENSMUST00000120491 577 ntBASIC3.54□□□□□ -1.84
Pcdhgb1Q91XX8 Gm13339-201ENSMUST00000120651 510 ntBASIC3.54□□□□□ -1.84
Pcdhgb1Q91XX8 n-R5s179-201ENSMUST00000122564 118 ntBASIC3.54□□□□□ -1.84
Pcdhgb1Q91XX8 Gm23118-201ENSMUST00000122657 187 ntBASIC3.54□□□□□ -1.84
Pcdhgb1Q91XX8 Gm26020-201ENSMUST00000122729 183 ntBASIC3.54□□□□□ -1.84
Pcdhgb1Q91XX8 Gm15870-201ENSMUST00000132657 644 ntTSL 3 BASIC3.54□□□□□ -1.84
Pcdhgb1Q91XX8 Gm13943-201ENSMUST00000144043 343 ntTSL 5 BASIC3.54□□□□□ -1.84
Pcdhgb1Q91XX8 Gm12065-201ENSMUST00000149592 656 ntTSL 3 BASIC3.54□□□□□ -1.84
Pcdhgb1Q91XX8 Gm14707-201ENSMUST00000152793 398 ntTSL 5 BASIC3.54□□□□□ -1.84
Pcdhgb1Q91XX8 Gm22561-201ENSMUST00000157331 84 ntBASIC3.54□□□□□ -1.84
Pcdhgb1Q91XX8 Gm10717-208ENSMUST00000179839 681 ntTSL 5 BASIC3.54□□□□□ -1.84
Pcdhgb1Q91XX8 Gm10717-209ENSMUST00000179982 681 ntTSL 5 BASIC3.54□□□□□ -1.84
Pcdhgb1Q91XX8 Gm26988-201ENSMUST00000183296 945 ntBASIC3.54□□□□□ -1.84
Pcdhgb1Q91XX8 Gm6947-201ENSMUST00000186254 78 ntBASIC3.54□□□□□ -1.84
Pcdhgb1Q91XX8 Fam122c-203ENSMUST00000186314 898 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
Pcdhgb1Q91XX8 Gm28069-201ENSMUST00000189926 214 ntBASIC3.54□□□□□ -1.84
Pcdhgb1Q91XX8 Gm20885-201ENSMUST00000190192 654 ntBASIC3.54□□□□□ -1.84
Pcdhgb1Q91XX8 Gm37175-201ENSMUST00000192023 587 ntTSL 5 BASIC3.54□□□□□ -1.84
Pcdhgb1Q91XX8 Gm29740-201ENSMUST00000193182 655 ntBASIC3.54□□□□□ -1.84
Pcdhgb1Q91XX8 Gm36866-201ENSMUST00000193343 657 ntBASIC3.54□□□□□ -1.84
Pcdhgb1Q91XX8 Gm36047-201ENSMUST00000193659 657 ntBASIC3.54□□□□□ -1.84
Pcdhgb1Q91XX8 Gm20857-201ENSMUST00000194766 657 ntBASIC3.54□□□□□ -1.84
Pcdhgb1Q91XX8 Gm20858-201ENSMUST00000195459 657 ntBASIC3.54□□□□□ -1.84
Pcdhgb1Q91XX8 Gm43513-201ENSMUST00000199779 1076 ntBASIC3.54□□□□□ -1.84
Pcdhgb1Q91XX8 Gm29754-201ENSMUST00000206269 358 ntBASIC3.54□□□□□ -1.84
Pcdhgb1Q91XX8 Gm45146-201ENSMUST00000207108 221 ntBASIC3.54□□□□□ -1.84
Pcdhgb1Q91XX8 AC161054.1-201ENSMUST00000214319 184 ntBASIC3.54□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 82.6 ms