Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Mir682-201ENSMUST00000102281 96 ntBASIC1.87□□□□□ -2.11
Nup35Q8R4R6 Sult2a5-201ENSMUST00000108525 1046 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
Nup35Q8R4R6 Mir466k-201ENSMUST00000116774 122 ntBASIC1.87□□□□□ -2.11
Nup35Q8R4R6 Gm15488-201ENSMUST00000121682 670 ntBASIC1.87□□□□□ -2.11
Nup35Q8R4R6 Gm12693-201ENSMUST00000121965 483 ntBASIC1.87□□□□□ -2.11
Nup35Q8R4R6 1700046C09Rik-201ENSMUST00000139973 543 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
Nup35Q8R4R6 Gm28039-201ENSMUST00000149128 254 ntTSL 3 BASIC1.87□□□□□ -2.11
Nup35Q8R4R6 Gm24905-201ENSMUST00000158129 104 ntBASIC1.87□□□□□ -2.11
Nup35Q8R4R6 Gm7346-201ENSMUST00000169661 476 ntBASIC1.87□□□□□ -2.11
Nup35Q8R4R6 Gm9587-201ENSMUST00000172449 454 ntBASIC1.87□□□□□ -2.11
Nup35Q8R4R6 Gm25942-201ENSMUST00000180080 110 ntBASIC1.87□□□□□ -2.11
Nup35Q8R4R6 Gm5224-201ENSMUST00000183060 350 ntBASIC1.87□□□□□ -2.11
Nup35Q8R4R6 Gm20897-201ENSMUST00000185240 923 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
Nup35Q8R4R6 Gm20883-201ENSMUST00000185245 922 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
Nup35Q8R4R6 Gm21117-202ENSMUST00000185327 925 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
Nup35Q8R4R6 Gm20916-202ENSMUST00000185338 923 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
Nup35Q8R4R6 Gm28897-201ENSMUST00000185340 923 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
Nup35Q8R4R6 Gm20736-202ENSMUST00000185550 923 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
Nup35Q8R4R6 Gm20835-201ENSMUST00000185565 923 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
Nup35Q8R4R6 Gm29564-201ENSMUST00000185575 923 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
Nup35Q8R4R6 Gm29299-201ENSMUST00000185609 923 ntBASIC1.87□□□□□ -2.11
Nup35Q8R4R6 Gm21317-201ENSMUST00000185636 923 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
Nup35Q8R4R6 Gm21095-202ENSMUST00000185776 923 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
Nup35Q8R4R6 Gm28553-201ENSMUST00000185924 923 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
Nup35Q8R4R6 Gm20908-201ENSMUST00000186004 922 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
Nup35Q8R4R6 Gm20906-201ENSMUST00000186493 923 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
Nup35Q8R4R6 Gm20929-201ENSMUST00000186578 923 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
Nup35Q8R4R6 Gm21518-202ENSMUST00000186938 922 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
Nup35Q8R4R6 Gm20855-202ENSMUST00000186996 924 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
Nup35Q8R4R6 Gm20911-201ENSMUST00000187135 924 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
Nup35Q8R4R6 Gm28102-201ENSMUST00000187146 924 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
Nup35Q8R4R6 Gm28827-201ENSMUST00000187165 923 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
Nup35Q8R4R6 Gm20931-202ENSMUST00000187293 922 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
Nup35Q8R4R6 Gm21760-202ENSMUST00000187433 923 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
Nup35Q8R4R6 Gm20920-201ENSMUST00000187477 922 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
Nup35Q8R4R6 Gm21627-201ENSMUST00000187768 918 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
Nup35Q8R4R6 Gm29554-201ENSMUST00000187922 821 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
Nup35Q8R4R6 Gm9541-201ENSMUST00000188409 502 ntBASIC1.87□□□□□ -2.11
Nup35Q8R4R6 Gm20850-201ENSMUST00000188672 924 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
Nup35Q8R4R6 Gm21488-201ENSMUST00000188744 923 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
Nup35Q8R4R6 Gm20820-201ENSMUST00000188754 921 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
Nup35Q8R4R6 Gm20894-201ENSMUST00000188864 923 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
Nup35Q8R4R6 Gm20869-201ENSMUST00000188958 924 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
Nup35Q8R4R6 Gm21173-201ENSMUST00000189238 923 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
Nup35Q8R4R6 Gm20870-201ENSMUST00000189315 922 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
Nup35Q8R4R6 Gm20903-201ENSMUST00000189346 923 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
Nup35Q8R4R6 Gm21209-202ENSMUST00000189354 922 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
Nup35Q8R4R6 Gm20937-203ENSMUST00000189422 923 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
Nup35Q8R4R6 Gm20890-201ENSMUST00000189518 923 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
Nup35Q8R4R6 Gm21477-202ENSMUST00000189543 924 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
Nup35Q8R4R6 Gm29110-201ENSMUST00000189924 922 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
Nup35Q8R4R6 Gm20814-201ENSMUST00000190173 922 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
Nup35Q8R4R6 Gm29573-201ENSMUST00000190291 919 ntBASIC1.87□□□□□ -2.11
Nup35Q8R4R6 Sly-202ENSMUST00000190292 922 ntAPPRIS P2 TSL 1 (best) BASIC1.87□□□□□ -2.11
Nup35Q8R4R6 Gm21650-202ENSMUST00000190551 923 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
Nup35Q8R4R6 Gm20905-201ENSMUST00000190782 923 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
Nup35Q8R4R6 Gm20817-201ENSMUST00000191123 923 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
Nup35Q8R4R6 Gm20843-202ENSMUST00000191305 925 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
Nup35Q8R4R6 Gm21258-202ENSMUST00000191553 923 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
Nup35Q8R4R6 Gm29866-201ENSMUST00000191675 923 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
Nup35Q8R4R6 Gm31571-201ENSMUST00000192521 922 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
Nup35Q8R4R6 Gm21366-201ENSMUST00000192892 923 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
Nup35Q8R4R6 Gm8023-201ENSMUST00000195298 903 ntBASIC1.87□□□□□ -2.11
Nup35Q8R4R6 Gm42465-201ENSMUST00000197036 492 ntBASIC1.87□□□□□ -2.11
Nup35Q8R4R6 1700016F12Rik-201ENSMUST00000198159 655 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
Nup35Q8R4R6 Gm44526-201ENSMUST00000204664 121 ntBASIC1.87□□□□□ -2.11
Nup35Q8R4R6 Gm18871-201ENSMUST00000218655 745 ntBASIC1.87□□□□□ -2.11
Nup35Q8R4R6 AC101984.1-201ENSMUST00000219639 402 ntBASIC1.87□□□□□ -2.11
Nup35Q8R4R6 AC155634.2-201ENSMUST00000222001 489 ntTSL 3 BASIC1.87□□□□□ -2.11
Nup35Q8R4R6 AC140451.2-202ENSMUST00000226156 574 ntBASIC1.87□□□□□ -2.11
Nup35Q8R4R6 Crisp2-201ENSMUST00000024724 1438 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
Nup35Q8R4R6 1700111E14Rik-201ENSMUST00000031863 908 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
Nup35Q8R4R6 Spata4-201ENSMUST00000033917 1057 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
Nup35Q8R4R6 Gm10025-201ENSMUST00000079568 372 ntBASIC1.87□□□□□ -2.11
Nup35Q8R4R6 n-R5s86-201ENSMUST00000083215 119 ntBASIC1.87□□□□□ -2.11
Nup35Q8R4R6 Gm22293-201ENSMUST00000083314 109 ntBASIC1.87□□□□□ -2.11
Nup35Q8R4R6 Gm5168-201ENSMUST00000089165 824 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
Nup35Q8R4R6 Olfr803-202ENSMUST00000204641 2385 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
Nup35Q8R4R6 Gm12022-201ENSMUST00000143311 1340 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
Nup35Q8R4R6 Gm5583-201ENSMUST00000174328 1519 ntBASIC1.86□□□□□ -2.11
Nup35Q8R4R6 Zfp988-201ENSMUST00000148762 2800 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
Nup35Q8R4R6 Olfr1025-ps1-202ENSMUST00000213474 3578 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
Nup35Q8R4R6 Gm44680-201ENSMUST00000208414 2910 ntBASIC1.86□□□□□ -2.11
Nup35Q8R4R6 Vmn1r178-204ENSMUST00000226640 2282 ntBASIC1.86□□□□□ -2.11
Nup35Q8R4R6 Olfr830-202ENSMUST00000212723 3105 ntAPPRIS ALT2 TSL 5 BASIC1.86□□□□□ -2.11
Nup35Q8R4R6 Gm26154-201ENSMUST00000102339 96 ntBASIC1.86□□□□□ -2.11
Nup35Q8R4R6 Gm13756-201ENSMUST00000117618 222 ntBASIC1.86□□□□□ -2.11
Nup35Q8R4R6 Gm13640-201ENSMUST00000118445 264 ntBASIC1.86□□□□□ -2.11
Nup35Q8R4R6 Rpl23a-ps6-201ENSMUST00000119466 468 ntBASIC1.86□□□□□ -2.11
Nup35Q8R4R6 Gm16017-201ENSMUST00000119834 208 ntBASIC1.86□□□□□ -2.11
Nup35Q8R4R6 Gm25270-201ENSMUST00000122606 138 ntBASIC1.86□□□□□ -2.11
Nup35Q8R4R6 Gm13200-201ENSMUST00000138802 258 ntTSL 3 BASIC1.86□□□□□ -2.11
Nup35Q8R4R6 Gm24138-201ENSMUST00000157572 114 ntBASIC1.86□□□□□ -2.11
Nup35Q8R4R6 Gm17183-201ENSMUST00000171170 493 ntBASIC1.86□□□□□ -2.11
Nup35Q8R4R6 Gm17727-201ENSMUST00000171898 643 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
Nup35Q8R4R6 Gm27869-201ENSMUST00000184327 122 ntBASIC1.86□□□□□ -2.11
Nup35Q8R4R6 Trbv27-201ENSMUST00000193711 277 ntBASIC1.86□□□□□ -2.11
Nup35Q8R4R6 Gm44161-201ENSMUST00000203532 253 ntBASIC1.86□□□□□ -2.11
Nup35Q8R4R6 Gm44174-201ENSMUST00000205022 141 ntTSL 2 BASIC1.86□□□□□ -2.11
Nup35Q8R4R6 AC157570.3-201ENSMUST00000219281 205 ntBASIC1.86□□□□□ -2.11
Retrieved 100 of 76,532 protein–RNA pairs in 89.4 ms