Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Slc22a22-201ENSMUST00000022995 2015 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Clrn1Q8K445 Gm26147-201ENSMUST00000104479 114 ntBASIC4.01□□□□□ -1.77
Clrn1Q8K445 Gm24469-201ENSMUST00000104487 131 ntBASIC4.01□□□□□ -1.77
Clrn1Q8K445 Gm14304-201ENSMUST00000117272 446 ntBASIC4.01□□□□□ -1.77
Clrn1Q8K445 Gm14559-201ENSMUST00000121745 496 ntBASIC4.01□□□□□ -1.77
Clrn1Q8K445 Etaa1os-201ENSMUST00000140161 550 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Clrn1Q8K445 Gm12195-201ENSMUST00000144990 469 ntTSL 3 BASIC4.01□□□□□ -1.77
Clrn1Q8K445 Gm6058-201ENSMUST00000154261 399 ntBASIC4.01□□□□□ -1.77
Clrn1Q8K445 Gm29320-201ENSMUST00000185235 615 ntBASIC4.01□□□□□ -1.77
Clrn1Q8K445 Gm29179-202ENSMUST00000186138 615 ntBASIC4.01□□□□□ -1.77
Clrn1Q8K445 Gm29448-201ENSMUST00000186675 615 ntBASIC4.01□□□□□ -1.77
Clrn1Q8K445 Gm29314-201ENSMUST00000186800 615 ntBASIC4.01□□□□□ -1.77
Clrn1Q8K445 Gm28253-202ENSMUST00000187971 615 ntBASIC4.01□□□□□ -1.77
Clrn1Q8K445 Gm29169-201ENSMUST00000189835 615 ntBASIC4.01□□□□□ -1.77
Clrn1Q8K445 Gm32033-201ENSMUST00000193483 339 ntBASIC4.01□□□□□ -1.77
Clrn1Q8K445 Gm9722-201ENSMUST00000194568 802 ntBASIC4.01□□□□□ -1.77
Clrn1Q8K445 Gm43739-201ENSMUST00000198294 307 ntBASIC4.01□□□□□ -1.77
Clrn1Q8K445 4930587E11Rik-202ENSMUST00000204857 807 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Clrn1Q8K445 Gm45032-201ENSMUST00000205375 520 ntBASIC4.01□□□□□ -1.77
Clrn1Q8K445 Gm44825-201ENSMUST00000207557 150 ntBASIC4.01□□□□□ -1.77
Clrn1Q8K445 Gm44598-201ENSMUST00000207566 150 ntBASIC4.01□□□□□ -1.77
Clrn1Q8K445 Gm44811-201ENSMUST00000209120 228 ntBASIC4.01□□□□□ -1.77
Clrn1Q8K445 4930567H12Rik-204ENSMUST00000213085 801 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Clrn1Q8K445 Gm8274-201ENSMUST00000219820 463 ntBASIC4.01□□□□□ -1.77
Clrn1Q8K445 1700112M02Rik-201ENSMUST00000221719 348 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Clrn1Q8K445 2900042G08Rik-201ENSMUST00000221776 650 ntBASIC4.01□□□□□ -1.77
Clrn1Q8K445 AC166358.4-201ENSMUST00000223030 105 ntBASIC4.01□□□□□ -1.77
Clrn1Q8K445 AL606472.1-201ENSMUST00000224628 275 ntBASIC4.01□□□□□ -1.77
Clrn1Q8K445 AC154515.2-201ENSMUST00000226093 406 ntBASIC4.01□□□□□ -1.77
Clrn1Q8K445 AC137961.1-201ENSMUST00000227924 734 ntBASIC4.01□□□□□ -1.77
Clrn1Q8K445 Sprr4-201ENSMUST00000062129 231 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
Clrn1Q8K445 Gm26447-201ENSMUST00000082448 129 ntBASIC4.01□□□□□ -1.77
Clrn1Q8K445 Mir99a-201ENSMUST00000083596 65 ntBASIC4.01□□□□□ -1.77
Clrn1Q8K445 Gm33680-202ENSMUST00000219411 3401 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Clrn1Q8K445 Gm29221-201ENSMUST00000186092 2894 ntTSL 5 BASIC4.01□□□□□ -1.77
Clrn1Q8K445 Cfh-203ENSMUST00000111977 4100 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
Clrn1Q8K445 Zfp266-202ENSMUST00000174462 6283 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Clrn1Q8K445 Gm44438-201ENSMUST00000204388 3236 ntBASIC4.01□□□□□ -1.77
Clrn1Q8K445 9330159F19Rik-202ENSMUST00000213489 2992 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Clrn1Q8K445 Olfr50-202ENSMUST00000216753 4531 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Clrn1Q8K445 Olfr291-202ENSMUST00000217039 3471 ntAPPRIS ALT2 TSL 2 BASIC4.01□□□□□ -1.77
Clrn1Q8K445 Olfr1012-203ENSMUST00000214958 3076 ntAPPRIS P1 TSL 3 BASIC4.01□□□□□ -1.77
Clrn1Q8K445 Olfr1252-203ENSMUST00000216203 3243 ntAPPRIS P1 TSL 3 BASIC4□□□□□ -1.77
Clrn1Q8K445 Olfr598-202ENSMUST00000214765 2026 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Clrn1Q8K445 Mmrn1-201ENSMUST00000129603 4477 ntAPPRIS P3 TSL 1 (best) BASIC4□□□□□ -1.77
Clrn1Q8K445 Ktn1-215ENSMUST00000189101 3761 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
Clrn1Q8K445 Olfr646-202ENSMUST00000214099 3778 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Clrn1Q8K445 Olfr1130-201ENSMUST00000213103 2643 ntAPPRIS P1 TSL 3 BASIC4□□□□□ -1.77
Clrn1Q8K445 Angptl3-201ENSMUST00000030280 1482 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Clrn1Q8K445 Ano5-201ENSMUST00000043944 7785 ntTSL 1 (best) BASIC4□□□□□ -1.77
Clrn1Q8K445 Igkv14-100-201ENSMUST00000103325 350 ntAPPRIS ALT2 BASIC4□□□□□ -1.77
Clrn1Q8K445 Gm23948-201ENSMUST00000104030 132 ntBASIC4□□□□□ -1.77
Clrn1Q8K445 Gm24855-201ENSMUST00000104848 97 ntBASIC4□□□□□ -1.77
Clrn1Q8K445 Gm15426-201ENSMUST00000117823 556 ntBASIC4□□□□□ -1.77
Clrn1Q8K445 Gm11698-201ENSMUST00000117948 455 ntBASIC4□□□□□ -1.77
Clrn1Q8K445 Gm15735-201ENSMUST00000136187 514 ntTSL 3 BASIC4□□□□□ -1.77
Clrn1Q8K445 Gm26041-201ENSMUST00000158148 108 ntBASIC4□□□□□ -1.77
Clrn1Q8K445 Gm17416-201ENSMUST00000163724 201 ntAPPRIS P1 BASIC4□□□□□ -1.77
Clrn1Q8K445 Gm17109-201ENSMUST00000163985 358 ntBASIC4□□□□□ -1.77
Clrn1Q8K445 Mir3058-201ENSMUST00000175126 91 ntBASIC4□□□□□ -1.77
Clrn1Q8K445 Vmn2r-ps116-201ENSMUST00000175997 126 ntBASIC4□□□□□ -1.77
Clrn1Q8K445 Ighv6-5-201ENSMUST00000179796 297 ntAPPRIS P1 BASIC4□□□□□ -1.77
Clrn1Q8K445 Rp31-ps19-201ENSMUST00000180929 353 ntBASIC4□□□□□ -1.77
Clrn1Q8K445 Gm29097-201ENSMUST00000190273 422 ntBASIC4□□□□□ -1.77
Clrn1Q8K445 Gm37670-201ENSMUST00000193622 229 ntBASIC4□□□□□ -1.77
Clrn1Q8K445 Ighv2-8-201ENSMUST00000193935 262 ntBASIC4□□□□□ -1.77
Clrn1Q8K445 Gm40040-202ENSMUST00000196337 305 ntTSL 3 BASIC4□□□□□ -1.77
Clrn1Q8K445 Gm7407-201ENSMUST00000208301 568 ntBASIC4□□□□□ -1.77
Clrn1Q8K445 Gm45327-201ENSMUST00000211612 565 ntBASIC4□□□□□ -1.77
Clrn1Q8K445 AC107808.1-201ENSMUST00000213260 386 ntTSL 3 BASIC4□□□□□ -1.77
Clrn1Q8K445 AC163357.1-201ENSMUST00000220847 233 ntBASIC4□□□□□ -1.77
Clrn1Q8K445 Olfr937-201ENSMUST00000055567 936 ntAPPRIS P1 BASIC4□□□□□ -1.77
Clrn1Q8K445 2610044O15Rik8-201ENSMUST00000079272 264 ntTSL 5 BASIC4□□□□□ -1.77
Clrn1Q8K445 Mir215-201ENSMUST00000083628 112 ntBASIC4□□□□□ -1.77
Clrn1Q8K445 Nbeal1-203ENSMUST00000160834 15731 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Clrn1Q8K445 Glra3-201ENSMUST00000000275 6508 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Clrn1Q8K445 Zfp595-201ENSMUST00000109735 3896 ntAPPRIS P2 TSL 1 (best) BASIC4□□□□□ -1.77
Clrn1Q8K445 Zfp72-202ENSMUST00000223163 4153 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Clrn1Q8K445 Obox1-201ENSMUST00000067288 1512 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Clrn1Q8K445 Gm45131-201ENSMUST00000208051 2582 ntBASIC4□□□□□ -1.77
Clrn1Q8K445 Cfap97-206ENSMUST00000164504 4521 ntAPPRIS P2 TSL 1 (best) BASIC4□□□□□ -1.77
Clrn1Q8K445 2610300M13Rik-202ENSMUST00000203716 1787 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Clrn1Q8K445 Gtf3c3-201ENSMUST00000041638 4582 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Clrn1Q8K445 March1-202ENSMUST00000072482 3953 ntTSL 5 BASIC3.99□□□□□ -1.77
Clrn1Q8K445 Kcnt2-203ENSMUST00000120796 3540 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Clrn1Q8K445 6720464F23Rik-201ENSMUST00000193946 3496 ntBASIC3.99□□□□□ -1.77
Clrn1Q8K445 Neto2-201ENSMUST00000109686 5610 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Clrn1Q8K445 Gm45378-201ENSMUST00000211063 2711 ntBASIC3.99□□□□□ -1.77
Clrn1Q8K445 Gm13153-201ENSMUST00000120969 637 ntBASIC3.99□□□□□ -1.77
Clrn1Q8K445 Gm15962-201ENSMUST00000124184 750 ntTSL 3 BASIC3.99□□□□□ -1.77
Clrn1Q8K445 Gm23581-201ENSMUST00000158531 63 ntBASIC3.99□□□□□ -1.77
Clrn1Q8K445 Gm22263-201ENSMUST00000180060 104 ntBASIC3.99□□□□□ -1.77
Clrn1Q8K445 Gm27414-201ENSMUST00000185033 381 ntBASIC3.99□□□□□ -1.77
Clrn1Q8K445 Mir6418-201ENSMUST00000185075 115 ntBASIC3.99□□□□□ -1.77
Clrn1Q8K445 Mir6372-201ENSMUST00000185114 109 ntBASIC3.99□□□□□ -1.77
Clrn1Q8K445 Gm42621-201ENSMUST00000198114 275 ntBASIC3.99□□□□□ -1.77
Clrn1Q8K445 Hcfc1r1-ps2-201ENSMUST00000199379 339 ntBASIC3.99□□□□□ -1.77
Clrn1Q8K445 Olfr879-ps1-201ENSMUST00000212455 694 ntBASIC3.99□□□□□ -1.77
Clrn1Q8K445 AC154374.1-201ENSMUST00000215351 351 ntBASIC3.99□□□□□ -1.77
Clrn1Q8K445 1700030L22Rik-201ENSMUST00000221214 567 ntTSL 5 BASIC3.99□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 65.3 ms