Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Gm14537-201ENSMUST00000117464 599 ntBASIC3.9□□□□□ -1.79
CopaQ8CIE6 Gm11693-201ENSMUST00000119625 565 ntBASIC3.9□□□□□ -1.79
CopaQ8CIE6 Gm6806-201ENSMUST00000120092 1006 ntBASIC3.9□□□□□ -1.79
CopaQ8CIE6 Gm14392-201ENSMUST00000120332 401 ntBASIC3.9□□□□□ -1.79
CopaQ8CIE6 Gm14413-201ENSMUST00000122158 408 ntBASIC3.9□□□□□ -1.79
CopaQ8CIE6 Gm15671-201ENSMUST00000124160 576 ntTSL 5 BASIC3.9□□□□□ -1.79
CopaQ8CIE6 Gm21814-201ENSMUST00000144085 291 ntTSL 5 BASIC3.9□□□□□ -1.79
CopaQ8CIE6 Gm13625-201ENSMUST00000149283 480 ntTSL 5 BASIC3.9□□□□□ -1.79
CopaQ8CIE6 Mir713-201ENSMUST00000178651 108 ntBASIC3.9□□□□□ -1.79
CopaQ8CIE6 Pnrc2-203ENSMUST00000180300 171 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CopaQ8CIE6 Gm27599-201ENSMUST00000183758 174 ntBASIC3.9□□□□□ -1.79
CopaQ8CIE6 Gm28098-201ENSMUST00000191361 699 ntBASIC3.9□□□□□ -1.79
CopaQ8CIE6 Ighv1-40-201ENSMUST00000194231 345 ntBASIC3.9□□□□□ -1.79
CopaQ8CIE6 Gm9227-201ENSMUST00000194733 566 ntBASIC3.9□□□□□ -1.79
CopaQ8CIE6 Gm43227-201ENSMUST00000202239 677 ntBASIC3.9□□□□□ -1.79
CopaQ8CIE6 AC159619.2-201ENSMUST00000222924 401 ntBASIC3.9□□□□□ -1.79
CopaQ8CIE6 AC118006.1-201ENSMUST00000224211 501 ntBASIC3.9□□□□□ -1.79
CopaQ8CIE6 AC187103.4-202ENSMUST00000225091 230 ntBASIC3.9□□□□□ -1.79
CopaQ8CIE6 AC101945.3-201ENSMUST00000226568 153 ntBASIC3.9□□□□□ -1.79
CopaQ8CIE6 AC115735.3-201ENSMUST00000227757 513 ntBASIC3.9□□□□□ -1.79
CopaQ8CIE6 Pak3-201ENSMUST00000033640 8348 ntAPPRIS ALT1 TSL 1 (best) BASIC3.9□□□□□ -1.79
CopaQ8CIE6 Erbin-205ENSMUST00000188997 5084 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
CopaQ8CIE6 Gm14305-203ENSMUST00000108983 1497 ntAPPRIS P1 TSL 3 BASIC3.9□□□□□ -1.79
CopaQ8CIE6 Gm2026-202ENSMUST00000109008 1497 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
CopaQ8CIE6 Gm4724-202ENSMUST00000109046 1497 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
CopaQ8CIE6 Gm4631-201ENSMUST00000109050 1494 ntTSL 5 BASIC3.9□□□□□ -1.79
CopaQ8CIE6 Gm14434-203ENSMUST00000122097 1497 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
CopaQ8CIE6 Gm11007-202ENSMUST00000178120 1497 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
CopaQ8CIE6 Gm2007-202ENSMUST00000178133 1497 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
CopaQ8CIE6 Gm11007-203ENSMUST00000185834 1494 ntTSL 5 BASIC3.9□□□□□ -1.79
CopaQ8CIE6 Gm2007-203ENSMUST00000189494 1494 ntTSL 5 BASIC3.9□□□□□ -1.79
CopaQ8CIE6 Zfp942-201ENSMUST00000074295 1461 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
CopaQ8CIE6 D030040B21Rik-201ENSMUST00000181371 2788 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CopaQ8CIE6 Vmn2r38-201ENSMUST00000108554 3663 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
CopaQ8CIE6 Vmn1r178-204ENSMUST00000226640 2282 ntBASIC3.9□□□□□ -1.79
CopaQ8CIE6 A630033H20Rik-205ENSMUST00000167673 3044 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
CopaQ8CIE6 Gm14325-201ENSMUST00000108939 1576 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
CopaQ8CIE6 A830011K09Rik-202ENSMUST00000162868 2201 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CopaQ8CIE6 Csmd3-209ENSMUST00000162830 13012 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
CopaQ8CIE6 Gm25833-201ENSMUST00000104137 133 ntBASIC3.89□□□□□ -1.79
CopaQ8CIE6 Mir294-201ENSMUST00000104710 84 ntBASIC3.89□□□□□ -1.79
CopaQ8CIE6 Gm11576-201ENSMUST00000117433 417 ntBASIC3.89□□□□□ -1.79
CopaQ8CIE6 Gm12640-201ENSMUST00000120097 310 ntBASIC3.89□□□□□ -1.79
CopaQ8CIE6 Gm15147-201ENSMUST00000122263 483 ntBASIC3.89□□□□□ -1.79
CopaQ8CIE6 Gm14804-201ENSMUST00000122322 508 ntBASIC3.89□□□□□ -1.79
CopaQ8CIE6 Gm14271-201ENSMUST00000137886 630 ntTSL 3 BASIC3.89□□□□□ -1.79
CopaQ8CIE6 Gm23583-201ENSMUST00000158533 289 ntBASIC3.89□□□□□ -1.79
CopaQ8CIE6 Gm2862-201ENSMUST00000161524 328 ntBASIC3.89□□□□□ -1.79
CopaQ8CIE6 Gm20476-201ENSMUST00000172644 492 ntTSL 2 BASIC3.89□□□□□ -1.79
CopaQ8CIE6 Gm25198-201ENSMUST00000178574 110 ntBASIC3.89□□□□□ -1.79
CopaQ8CIE6 Gm26870-201ENSMUST00000181242 1170 ntTSL 5 BASIC3.89□□□□□ -1.79
CopaQ8CIE6 Gm26914-201ENSMUST00000182262 223 ntBASIC3.89□□□□□ -1.79
CopaQ8CIE6 Gm27226-201ENSMUST00000184676 511 ntTSL 2 BASIC3.89□□□□□ -1.79
CopaQ8CIE6 Sult2a6-202ENSMUST00000184731 664 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CopaQ8CIE6 Gm28494-201ENSMUST00000187687 562 ntTSL 5 BASIC3.89□□□□□ -1.79
CopaQ8CIE6 Gm37568-201ENSMUST00000191755 364 ntBASIC3.89□□□□□ -1.79
CopaQ8CIE6 Gm44343-201ENSMUST00000196702 90 ntBASIC3.89□□□□□ -1.79
CopaQ8CIE6 Igkv13-80-1-201ENSMUST00000197926 255 ntBASIC3.89□□□□□ -1.79
CopaQ8CIE6 Gm42665-201ENSMUST00000202100 586 ntBASIC3.89□□□□□ -1.79
CopaQ8CIE6 Gm44011-201ENSMUST00000203336 394 ntBASIC3.89□□□□□ -1.79
CopaQ8CIE6 Gm19244-201ENSMUST00000204340 253 ntBASIC3.89□□□□□ -1.79
CopaQ8CIE6 Gm35876-201ENSMUST00000205044 459 ntBASIC3.89□□□□□ -1.79
CopaQ8CIE6 Gm45105-201ENSMUST00000207824 397 ntBASIC3.89□□□□□ -1.79
CopaQ8CIE6 Olfr848-ps1-201ENSMUST00000212241 930 ntBASIC3.89□□□□□ -1.79
CopaQ8CIE6 AC153361.1-201ENSMUST00000219679 247 ntBASIC3.89□□□□□ -1.79
CopaQ8CIE6 AC154368.1-201ENSMUST00000223465 205 ntTSL 5 BASIC3.89□□□□□ -1.79
CopaQ8CIE6 AC116656.1-201ENSMUST00000227040 755 ntBASIC3.89□□□□□ -1.79
CopaQ8CIE6 Gm23614-201ENSMUST00000082598 107 ntBASIC3.89□□□□□ -1.79
CopaQ8CIE6 Gm23932-201ENSMUST00000082914 107 ntBASIC3.89□□□□□ -1.79
CopaQ8CIE6 Rpl32-ps-201ENSMUST00000091052 506 ntBASIC3.89□□□□□ -1.79
CopaQ8CIE6 Kctd4-201ENSMUST00000050120 3998 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CopaQ8CIE6 Slc22a30-203ENSMUST00000120540 2598 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CopaQ8CIE6 Nae1-201ENSMUST00000034349 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CopaQ8CIE6 Olfr194-202ENSMUST00000213228 3668 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
CopaQ8CIE6 Vmn2r-ps47-201ENSMUST00000174515 2557 ntBASIC3.88□□□□□ -1.79
CopaQ8CIE6 Olfr1323-203ENSMUST00000213556 5431 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
CopaQ8CIE6 Trbv5-201ENSMUST00000103266 368 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
CopaQ8CIE6 Zfp931-202ENSMUST00000108924 962 ntAPPRIS P1 TSL 3 BASIC3.88□□□□□ -1.79
CopaQ8CIE6 Gm14399-205ENSMUST00000109062 626 ntTSL 5 BASIC3.88□□□□□ -1.79
CopaQ8CIE6 Rps15a-ps7-201ENSMUST00000117430 392 ntBASIC3.88□□□□□ -1.79
CopaQ8CIE6 Gm14530-201ENSMUST00000122391 333 ntBASIC3.88□□□□□ -1.79
CopaQ8CIE6 Gm28039-201ENSMUST00000149128 254 ntTSL 3 BASIC3.88□□□□□ -1.79
CopaQ8CIE6 Gm26276-201ENSMUST00000157099 109 ntBASIC3.88□□□□□ -1.79
CopaQ8CIE6 Gm22849-201ENSMUST00000157713 307 ntBASIC3.88□□□□□ -1.79
CopaQ8CIE6 Gm24876-201ENSMUST00000158780 92 ntBASIC3.88□□□□□ -1.79
CopaQ8CIE6 4930505G20Rik-201ENSMUST00000176582 561 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CopaQ8CIE6 Ear1-202ENSMUST00000179200 519 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CopaQ8CIE6 Gm25361-201ENSMUST00000179358 76 ntBASIC3.88□□□□□ -1.79
CopaQ8CIE6 Gm11395-201ENSMUST00000181011 499 ntBASIC3.88□□□□□ -1.79
CopaQ8CIE6 Gm8816-201ENSMUST00000182280 1163 ntBASIC3.88□□□□□ -1.79
CopaQ8CIE6 Gm9892-201ENSMUST00000182415 992 ntBASIC3.88□□□□□ -1.79
CopaQ8CIE6 Ms4a4a-201ENSMUST00000188995 836 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
CopaQ8CIE6 1700024B18Rik-201ENSMUST00000190088 423 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CopaQ8CIE6 Gm19089-201ENSMUST00000197207 613 ntBASIC3.88□□□□□ -1.79
CopaQ8CIE6 Gm42924-201ENSMUST00000197261 185 ntBASIC3.88□□□□□ -1.79
CopaQ8CIE6 Igkv13-57-1-201ENSMUST00000198063 305 ntBASIC3.88□□□□□ -1.79
CopaQ8CIE6 Gm31752-201ENSMUST00000199456 856 ntTSL 2 BASIC3.88□□□□□ -1.79
CopaQ8CIE6 Gm44748-201ENSMUST00000206040 658 ntTSL 5 BASIC3.88□□□□□ -1.79
CopaQ8CIE6 Gm8745-201ENSMUST00000207846 782 ntBASIC3.88□□□□□ -1.79
CopaQ8CIE6 AC166343.1-201ENSMUST00000213261 577 ntBASIC3.88□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 121.1 ms