Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Gm29866-201ENSMUST00000191675 923 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Ccdc28bQ8CEG5 Gm31571-201ENSMUST00000192521 922 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Ccdc28bQ8CEG5 Gm21366-201ENSMUST00000192892 923 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Ccdc28bQ8CEG5 Gm43115-201ENSMUST00000196244 160 ntBASIC3.18□□□□□ -1.9
Ccdc28bQ8CEG5 Gm42622-201ENSMUST00000197229 355 ntBASIC3.18□□□□□ -1.9
Ccdc28bQ8CEG5 Gm42438-201ENSMUST00000197832 974 ntBASIC3.18□□□□□ -1.9
Ccdc28bQ8CEG5 Gm18429-201ENSMUST00000198707 421 ntBASIC3.18□□□□□ -1.9
Ccdc28bQ8CEG5 Gm18602-201ENSMUST00000209794 851 ntBASIC3.18□□□□□ -1.9
Ccdc28bQ8CEG5 Gm39147-201ENSMUST00000211376 465 ntBASIC3.18□□□□□ -1.9
Ccdc28bQ8CEG5 Gm18488-201ENSMUST00000215082 364 ntBASIC3.18□□□□□ -1.9
Ccdc28bQ8CEG5 AC122924.2-201ENSMUST00000220799 298 ntBASIC3.18□□□□□ -1.9
Ccdc28bQ8CEG5 Gm4036-201ENSMUST00000220842 626 ntBASIC3.18□□□□□ -1.9
Ccdc28bQ8CEG5 AC173482.2-201ENSMUST00000224044 750 ntBASIC3.18□□□□□ -1.9
Ccdc28bQ8CEG5 AC154640.2-201ENSMUST00000226324 472 ntBASIC3.18□□□□□ -1.9
Ccdc28bQ8CEG5 Olfr1193-201ENSMUST00000081697 957 ntBASIC3.18□□□□□ -1.9
Ccdc28bQ8CEG5 Gm24610-201ENSMUST00000083270 109 ntBASIC3.18□□□□□ -1.9
Ccdc28bQ8CEG5 Gm24446-201ENSMUST00000083982 156 ntBASIC3.18□□□□□ -1.9
Ccdc28bQ8CEG5 Gm16261-201ENSMUST00000096813 205 ntBASIC3.18□□□□□ -1.9
Ccdc28bQ8CEG5 Defb41-202ENSMUST00000097817 198 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Ccdc28bQ8CEG5 Olfr609-202ENSMUST00000216075 3429 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Ccdc28bQ8CEG5 Olfr33-202ENSMUST00000216312 2372 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Ccdc28bQ8CEG5 Olfr652-203ENSMUST00000216131 4773 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Ccdc28bQ8CEG5 Olfr299-202ENSMUST00000217253 4479 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Ccdc28bQ8CEG5 Vmn2r78-201ENSMUST00000170835 2611 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Ccdc28bQ8CEG5 Pak3-203ENSMUST00000112864 8612 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
Ccdc28bQ8CEG5 Olfr1033-202ENSMUST00000213865 3664 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Ccdc28bQ8CEG5 Gm44925-201ENSMUST00000208879 2110 ntBASIC3.17□□□□□ -1.9
Ccdc28bQ8CEG5 Gm44625-201ENSMUST00000207838 1561 ntBASIC3.17□□□□□ -1.9
Ccdc28bQ8CEG5 Olfr483-201ENSMUST00000104917 1065 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Ccdc28bQ8CEG5 Atp5j-203ENSMUST00000114193 680 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
Ccdc28bQ8CEG5 Igkv13-87-201ENSMUST00000114214 286 ntBASIC3.17□□□□□ -1.9
Ccdc28bQ8CEG5 Gm12149-201ENSMUST00000117511 654 ntBASIC3.17□□□□□ -1.9
Ccdc28bQ8CEG5 Gm15443-201ENSMUST00000118947 820 ntBASIC3.17□□□□□ -1.9
Ccdc28bQ8CEG5 Gm12495-201ENSMUST00000119750 447 ntBASIC3.17□□□□□ -1.9
Ccdc28bQ8CEG5 Gm13751-201ENSMUST00000120280 752 ntBASIC3.17□□□□□ -1.9
Ccdc28bQ8CEG5 Mup-ps17-201ENSMUST00000120723 218 ntBASIC3.17□□□□□ -1.9
Ccdc28bQ8CEG5 Gm14915-201ENSMUST00000120747 204 ntBASIC3.17□□□□□ -1.9
Ccdc28bQ8CEG5 Gm22204-201ENSMUST00000122654 327 ntBASIC3.17□□□□□ -1.9
Ccdc28bQ8CEG5 Gm14562-201ENSMUST00000129885 543 ntBASIC3.17□□□□□ -1.9
Ccdc28bQ8CEG5 1700036O09Rik-201ENSMUST00000136834 349 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
Ccdc28bQ8CEG5 Gm7582-201ENSMUST00000160831 603 ntBASIC3.17□□□□□ -1.9
Ccdc28bQ8CEG5 Mir3112-201ENSMUST00000175431 82 ntBASIC3.17□□□□□ -1.9
Ccdc28bQ8CEG5 Mir3090-201ENSMUST00000175597 87 ntBASIC3.17□□□□□ -1.9
Ccdc28bQ8CEG5 Gm24315-201ENSMUST00000177835 127 ntBASIC3.17□□□□□ -1.9
Ccdc28bQ8CEG5 Gm25194-201ENSMUST00000177987 79 ntBASIC3.17□□□□□ -1.9
Ccdc28bQ8CEG5 Gm23816-201ENSMUST00000179617 132 ntBASIC3.17□□□□□ -1.9
Ccdc28bQ8CEG5 Ranbp2-ps4-201ENSMUST00000183481 385 ntBASIC3.17□□□□□ -1.9
Ccdc28bQ8CEG5 Mir6413-201ENSMUST00000184049 108 ntBASIC3.17□□□□□ -1.9
Ccdc28bQ8CEG5 Gm27957-201ENSMUST00000184054 127 ntBASIC3.17□□□□□ -1.9
Ccdc28bQ8CEG5 1810044D09Rik-201ENSMUST00000186472 486 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
Ccdc28bQ8CEG5 Gm29045-201ENSMUST00000187278 698 ntBASIC3.17□□□□□ -1.9
Ccdc28bQ8CEG5 Gm38146-201ENSMUST00000194121 1293 ntBASIC3.17□□□□□ -1.9
Ccdc28bQ8CEG5 Gm43043-201ENSMUST00000196579 412 ntBASIC3.17□□□□□ -1.9
Ccdc28bQ8CEG5 Gm43431-201ENSMUST00000198577 340 ntBASIC3.17□□□□□ -1.9
Ccdc28bQ8CEG5 Gm44266-201ENSMUST00000205235 500 ntBASIC3.17□□□□□ -1.9
Ccdc28bQ8CEG5 Gm44748-201ENSMUST00000206040 658 ntTSL 5 BASIC3.17□□□□□ -1.9
Ccdc28bQ8CEG5 AC167977.1-201ENSMUST00000221384 234 ntBASIC3.17□□□□□ -1.9
Ccdc28bQ8CEG5 Gm8231-201ENSMUST00000221617 783 ntBASIC3.17□□□□□ -1.9
Ccdc28bQ8CEG5 AC166369.3-201ENSMUST00000227286 409 ntBASIC3.17□□□□□ -1.9
Ccdc28bQ8CEG5 Olfr791-201ENSMUST00000057477 939 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Ccdc28bQ8CEG5 Defb33-201ENSMUST00000098908 424 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
Ccdc28bQ8CEG5 Adam5-201ENSMUST00000050300 2560 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
Ccdc28bQ8CEG5 Spata31-201ENSMUST00000070216 3232 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Ccdc28bQ8CEG5 Gm42445-201ENSMUST00000196996 2893 ntBASIC3.17□□□□□ -1.9
Ccdc28bQ8CEG5 Gm4567-202ENSMUST00000190554 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Ccdc28bQ8CEG5 Gm10668-202ENSMUST00000191073 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Ccdc28bQ8CEG5 Olfr124-203ENSMUST00000216478 4416 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Ccdc28bQ8CEG5 AC161254.1-201ENSMUST00000220310 3842 ntBASIC3.16□□□□□ -1.9
Ccdc28bQ8CEG5 Mir592-201ENSMUST00000102113 96 ntBASIC3.16□□□□□ -1.9
Ccdc28bQ8CEG5 Gm15087-201ENSMUST00000117465 1172 ntBASIC3.16□□□□□ -1.9
Ccdc28bQ8CEG5 Gm14751-201ENSMUST00000117693 222 ntBASIC3.16□□□□□ -1.9
Ccdc28bQ8CEG5 Gm15060-201ENSMUST00000119550 948 ntBASIC3.16□□□□□ -1.9
Ccdc28bQ8CEG5 Gm14785-201ENSMUST00000120185 539 ntBASIC3.16□□□□□ -1.9
Ccdc28bQ8CEG5 Gm15480-201ENSMUST00000120442 519 ntBASIC3.16□□□□□ -1.9
Ccdc28bQ8CEG5 Gm13356-201ENSMUST00000121678 335 ntBASIC3.16□□□□□ -1.9
Ccdc28bQ8CEG5 Gm23118-201ENSMUST00000122657 187 ntBASIC3.16□□□□□ -1.9
Ccdc28bQ8CEG5 Gm26277-201ENSMUST00000157097 152 ntBASIC3.16□□□□□ -1.9
Ccdc28bQ8CEG5 Gm23538-201ENSMUST00000157535 101 ntBASIC3.16□□□□□ -1.9
Ccdc28bQ8CEG5 Gm23084-201ENSMUST00000157850 114 ntBASIC3.16□□□□□ -1.9
Ccdc28bQ8CEG5 4930579O11Rik-202ENSMUST00000168243 672 ntTSL 3 BASIC3.16□□□□□ -1.9
Ccdc28bQ8CEG5 Gm22858-201ENSMUST00000174972 76 ntBASIC3.16□□□□□ -1.9
Ccdc28bQ8CEG5 Gm21828-201ENSMUST00000178050 543 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Ccdc28bQ8CEG5 Gm21866-201ENSMUST00000178428 543 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Ccdc28bQ8CEG5 Gm21725-201ENSMUST00000178519 543 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Ccdc28bQ8CEG5 Gm21800-201ENSMUST00000178559 543 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Ccdc28bQ8CEG5 Gm22910-201ENSMUST00000178568 132 ntBASIC3.16□□□□□ -1.9
Ccdc28bQ8CEG5 Gm25198-201ENSMUST00000178574 110 ntBASIC3.16□□□□□ -1.9
Ccdc28bQ8CEG5 Gm21852-201ENSMUST00000179125 543 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Ccdc28bQ8CEG5 Gm21764-201ENSMUST00000179219 543 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Ccdc28bQ8CEG5 Gm21891-201ENSMUST00000179284 543 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Ccdc28bQ8CEG5 Gm21904-201ENSMUST00000179522 543 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Ccdc28bQ8CEG5 Gm28666-201ENSMUST00000186649 274 ntBASIC3.16□□□□□ -1.9
Ccdc28bQ8CEG5 Rpl23a-ps9-201ENSMUST00000188369 463 ntBASIC3.16□□□□□ -1.9
Ccdc28bQ8CEG5 Gm19774-201ENSMUST00000190667 114 ntBASIC3.16□□□□□ -1.9
Ccdc28bQ8CEG5 Rpl23a-ps11-201ENSMUST00000191583 463 ntBASIC3.16□□□□□ -1.9
Ccdc28bQ8CEG5 Gm20203-201ENSMUST00000192352 332 ntBASIC3.16□□□□□ -1.9
Ccdc28bQ8CEG5 Gm43109-201ENSMUST00000198269 753 ntTSL 3 BASIC3.16□□□□□ -1.9
Ccdc28bQ8CEG5 Gm44513-201ENSMUST00000206811 439 ntBASIC3.16□□□□□ -1.9
Ccdc28bQ8CEG5 CT010455.1-201ENSMUST00000218579 413 ntBASIC3.16□□□□□ -1.9
Ccdc28bQ8CEG5 Gm8249-201ENSMUST00000219225 465 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 98.5 ms