Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Gm22794-201ENSMUST00000157228 306 ntBASIC2.59□□□□□ -1.99
Clrn3Q8BHH8 Gm26099-201ENSMUST00000157248 109 ntBASIC2.59□□□□□ -1.99
Clrn3Q8BHH8 Gm22330-201ENSMUST00000158068 115 ntBASIC2.59□□□□□ -1.99
Clrn3Q8BHH8 Gm20538-201ENSMUST00000166808 225 ntAPPRIS P1 TSL 3 BASIC2.59□□□□□ -1.99
Clrn3Q8BHH8 Gm15564-202ENSMUST00000173605 402 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
Clrn3Q8BHH8 Rpl31-ps7-201ENSMUST00000180629 379 ntBASIC2.59□□□□□ -1.99
Clrn3Q8BHH8 Gm8649-201ENSMUST00000181799 233 ntBASIC2.59□□□□□ -1.99
Clrn3Q8BHH8 Mir7578-201ENSMUST00000183455 82 ntBASIC2.59□□□□□ -1.99
Clrn3Q8BHH8 Gm27161-201ENSMUST00000183960 562 ntBASIC2.59□□□□□ -1.99
Clrn3Q8BHH8 Gm29648-201ENSMUST00000188651 650 ntTSL 5 BASIC2.59□□□□□ -1.99
Clrn3Q8BHH8 Gm9696-202ENSMUST00000191541 830 ntBASIC2.59□□□□□ -1.99
Clrn3Q8BHH8 Gm6140-201ENSMUST00000192494 966 ntBASIC2.59□□□□□ -1.99
Clrn3Q8BHH8 Gm44720-201ENSMUST00000206076 260 ntBASIC2.59□□□□□ -1.99
Clrn3Q8BHH8 Gm44585-201ENSMUST00000207150 607 ntBASIC2.59□□□□□ -1.99
Clrn3Q8BHH8 Gm45530-201ENSMUST00000211658 225 ntBASIC2.59□□□□□ -1.99
Clrn3Q8BHH8 Gm30534-201ENSMUST00000217928 207 ntBASIC2.59□□□□□ -1.99
Clrn3Q8BHH8 AC167202.1-201ENSMUST00000219027 331 ntBASIC2.59□□□□□ -1.99
Clrn3Q8BHH8 AC144783.2-201ENSMUST00000219089 195 ntBASIC2.59□□□□□ -1.99
Clrn3Q8BHH8 AC154552.2-201ENSMUST00000223117 794 ntTSL 5 BASIC2.59□□□□□ -1.99
Clrn3Q8BHH8 AC154594.1-201ENSMUST00000225171 1273 ntBASIC2.59□□□□□ -1.99
Clrn3Q8BHH8 AC140451.2-202ENSMUST00000226156 574 ntBASIC2.59□□□□□ -1.99
Clrn3Q8BHH8 Olfr728-201ENSMUST00000051563 936 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
Clrn3Q8BHH8 Klra6-201ENSMUST00000074056 1116 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
Clrn3Q8BHH8 Gm15097-202ENSMUST00000112741 1953 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
Clrn3Q8BHH8 Gm12640-201ENSMUST00000120097 310 ntBASIC2.58□□□□□ -2
Clrn3Q8BHH8 Gm26027-201ENSMUST00000122725 268 ntBASIC2.58□□□□□ -2
Clrn3Q8BHH8 Scml1-201ENSMUST00000136860 576 ntTSL 3 BASIC2.58□□□□□ -2
Clrn3Q8BHH8 Gm16351-201ENSMUST00000142008 250 ntTSL 3 BASIC2.58□□□□□ -2
Clrn3Q8BHH8 Gm15669-201ENSMUST00000147834 526 ntTSL 3 BASIC2.58□□□□□ -2
Clrn3Q8BHH8 Gm24443-201ENSMUST00000157242 132 ntBASIC2.58□□□□□ -2
Clrn3Q8BHH8 Gm26215-201ENSMUST00000158584 139 ntBASIC2.58□□□□□ -2
Clrn3Q8BHH8 Gm20450-201ENSMUST00000173652 147 ntBASIC2.58□□□□□ -2
Clrn3Q8BHH8 Gm23268-201ENSMUST00000175494 78 ntBASIC2.58□□□□□ -2
Clrn3Q8BHH8 Snord93-201ENSMUST00000175580 71 ntBASIC2.58□□□□□ -2
Clrn3Q8BHH8 Cldn34c2-201ENSMUST00000178457 702 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Clrn3Q8BHH8 Mir7242-201ENSMUST00000183710 79 ntBASIC2.58□□□□□ -2
Clrn3Q8BHH8 Mir7047-201ENSMUST00000184595 64 ntBASIC2.58□□□□□ -2
Clrn3Q8BHH8 4930553J12Rik-202ENSMUST00000187823 851 ntBASIC2.58□□□□□ -2
Clrn3Q8BHH8 Gm44476-201ENSMUST00000196225 91 ntBASIC2.58□□□□□ -2
Clrn3Q8BHH8 Gm43614-201ENSMUST00000197030 517 ntTSL 2 BASIC2.58□□□□□ -2
Clrn3Q8BHH8 C030015E24Rik-201ENSMUST00000198148 828 ntBASIC2.58□□□□□ -2
Clrn3Q8BHH8 Gm24350-202ENSMUST00000198309 132 ntBASIC2.58□□□□□ -2
Clrn3Q8BHH8 Igkv14-134-1-201ENSMUST00000199111 331 ntBASIC2.58□□□□□ -2
Clrn3Q8BHH8 Gm45860-201ENSMUST00000212700 334 ntBASIC2.58□□□□□ -2
Clrn3Q8BHH8 AC138027.1-201ENSMUST00000218324 472 ntTSL 5 BASIC2.58□□□□□ -2
Clrn3Q8BHH8 AC168274.2-201ENSMUST00000219252 338 ntTSL 5 BASIC2.58□□□□□ -2
Clrn3Q8BHH8 Gm18338-201ENSMUST00000222381 560 ntBASIC2.58□□□□□ -2
Clrn3Q8BHH8 CT030135.1-201ENSMUST00000223760 570 ntBASIC2.58□□□□□ -2
Clrn3Q8BHH8 AC165146.1-201ENSMUST00000223777 900 ntBASIC2.58□□□□□ -2
Clrn3Q8BHH8 AC124524.1-201ENSMUST00000225833 181 ntBASIC2.58□□□□□ -2
Clrn3Q8BHH8 Olfr815-201ENSMUST00000071557 951 ntBASIC2.58□□□□□ -2
Clrn3Q8BHH8 Mucl1-201ENSMUST00000078842 621 ntAPPRIS ALT2 BASIC2.58□□□□□ -2
Clrn3Q8BHH8 Gm25856-201ENSMUST00000082786 75 ntBASIC2.58□□□□□ -2
Clrn3Q8BHH8 Gm26458-201ENSMUST00000082832 128 ntBASIC2.58□□□□□ -2
Clrn3Q8BHH8 Olfr652-204ENSMUST00000219111 5329 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Clrn3Q8BHH8 Gm24982-201ENSMUST00000104456 132 ntBASIC2.57□□□□□ -2
Clrn3Q8BHH8 Gm14459-201ENSMUST00000115573 540 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Clrn3Q8BHH8 Gm25539-201ENSMUST00000116886 122 ntBASIC2.57□□□□□ -2
Clrn3Q8BHH8 Gm15025-201ENSMUST00000118434 418 ntBASIC2.57□□□□□ -2
Clrn3Q8BHH8 Vmn1r-ps106-201ENSMUST00000120587 824 ntBASIC2.57□□□□□ -2
Clrn3Q8BHH8 Gm14069-201ENSMUST00000120815 229 ntBASIC2.57□□□□□ -2
Clrn3Q8BHH8 Rpl30-ps9-201ENSMUST00000122265 345 ntBASIC2.57□□□□□ -2
Clrn3Q8BHH8 DQ267100-201ENSMUST00000122600 72 ntBASIC2.57□□□□□ -2
Clrn3Q8BHH8 Gm22563-201ENSMUST00000157333 269 ntBASIC2.57□□□□□ -2
Clrn3Q8BHH8 Gm22390-201ENSMUST00000157588 325 ntBASIC2.57□□□□□ -2
Clrn3Q8BHH8 Gm16289-201ENSMUST00000162079 183 ntBASIC2.57□□□□□ -2
Clrn3Q8BHH8 Prl3d2-202ENSMUST00000164964 675 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
Clrn3Q8BHH8 Gm25360-201ENSMUST00000178786 191 ntBASIC2.57□□□□□ -2
Clrn3Q8BHH8 1700025F22Rik-202ENSMUST00000180678 658 ntTSL 1 (best) BASIC2.57□□□□□ -2
Clrn3Q8BHH8 1700025F22Rik-204ENSMUST00000181567 578 ntTSL 1 (best) BASIC2.57□□□□□ -2
Clrn3Q8BHH8 Gm37007-201ENSMUST00000194234 319 ntBASIC2.57□□□□□ -2
Clrn3Q8BHH8 Gm42828-201ENSMUST00000199669 469 ntBASIC2.57□□□□□ -2
Clrn3Q8BHH8 Gm43659-201ENSMUST00000200894 628 ntBASIC2.57□□□□□ -2
Clrn3Q8BHH8 Gm43930-201ENSMUST00000203868 845 ntBASIC2.57□□□□□ -2
Clrn3Q8BHH8 AC069074.2-201ENSMUST00000217819 428 ntBASIC2.57□□□□□ -2
Clrn3Q8BHH8 AC139754.1-201ENSMUST00000219418 950 ntTSL 1 (best) BASIC2.57□□□□□ -2
Clrn3Q8BHH8 Gm18026-201ENSMUST00000222789 727 ntBASIC2.57□□□□□ -2
Clrn3Q8BHH8 AC158395.1-201ENSMUST00000227206 452 ntBASIC2.57□□□□□ -2
Clrn3Q8BHH8 Olfr1008-201ENSMUST00000054868 942 ntAPPRIS P1 BASIC2.57□□□□□ -2
Clrn3Q8BHH8 1700025F22Rik-201ENSMUST00000078770 650 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Clrn3Q8BHH8 Sult2a2-201ENSMUST00000086148 741 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Clrn3Q8BHH8 Olfr1282-201ENSMUST00000099618 918 ntAPPRIS P1 BASIC2.57□□□□□ -2
Clrn3Q8BHH8 Esp31-201ENSMUST00000174742 1308 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Clrn3Q8BHH8 Gm44562-201ENSMUST00000207194 1347 ntBASIC2.57□□□□□ -2
Clrn3Q8BHH8 C630028M04Rik-201ENSMUST00000141452 3387 ntTSL 1 (best) BASIC2.57□□□□□ -2
Clrn3Q8BHH8 Gm43663-201ENSMUST00000198643 1505 ntBASIC2.57□□□□□ -2
Clrn3Q8BHH8 Olfr1477-202ENSMUST00000217001 4000 ntAPPRIS P1 TSL 2 BASIC2.57□□□□□ -2
Clrn3Q8BHH8 Vmn1r28-201ENSMUST00000226813 10877 ntAPPRIS P1 BASIC2.56□□□□□ -2
Clrn3Q8BHH8 Gm25466-201ENSMUST00000103995 132 ntBASIC2.56□□□□□ -2
Clrn3Q8BHH8 Gm14554-201ENSMUST00000119548 661 ntBASIC2.56□□□□□ -2
Clrn3Q8BHH8 Gm13853-201ENSMUST00000155496 557 ntTSL 3 BASIC2.56□□□□□ -2
Clrn3Q8BHH8 Gm25979-201ENSMUST00000157177 138 ntBASIC2.56□□□□□ -2
Clrn3Q8BHH8 Gm22769-201ENSMUST00000158367 98 ntBASIC2.56□□□□□ -2
Clrn3Q8BHH8 Gm17631-201ENSMUST00000171980 69 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Clrn3Q8BHH8 Olfr757-ps1-201ENSMUST00000172798 413 ntBASIC2.56□□□□□ -2
Clrn3Q8BHH8 Vmn1r-ps19-201ENSMUST00000177008 926 ntBASIC2.56□□□□□ -2
Clrn3Q8BHH8 Rpl31-ps21-201ENSMUST00000181182 374 ntBASIC2.56□□□□□ -2
Clrn3Q8BHH8 Gm19066-201ENSMUST00000193232 1078 ntBASIC2.56□□□□□ -2
Clrn3Q8BHH8 Mir9-1-201ENSMUST00000199907 89 ntBASIC2.56□□□□□ -2
Clrn3Q8BHH8 Gm43991-201ENSMUST00000203751 274 ntBASIC2.56□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 88.9 ms