Protein–RNA interactions for Protein: Q6PGB8

Smarca1, Probable global transcription activator SNF2L1, mousemouse

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarca1Q6PGB8 Gm27999-201ENSMUST00000183539 193 ntBASIC3.89□□□□□ -1.79
Smarca1Q6PGB8 Gm27161-201ENSMUST00000183960 562 ntBASIC3.89□□□□□ -1.79
Smarca1Q6PGB8 Rpl23a-ps10-201ENSMUST00000185511 462 ntBASIC3.89□□□□□ -1.79
Smarca1Q6PGB8 Nras-ps2-201ENSMUST00000195269 178 ntBASIC3.89□□□□□ -1.79
Smarca1Q6PGB8 Gm5322-201ENSMUST00000206142 699 ntBASIC3.89□□□□□ -1.79
Smarca1Q6PGB8 Gm7675-201ENSMUST00000208828 686 ntBASIC3.89□□□□□ -1.79
Smarca1Q6PGB8 Rpl26-ps6-201ENSMUST00000216693 434 ntBASIC3.89□□□□□ -1.79
Smarca1Q6PGB8 Gm3442-201ENSMUST00000216808 710 ntBASIC3.89□□□□□ -1.79
Smarca1Q6PGB8 Olfr946-ps1-201ENSMUST00000217547 341 ntBASIC3.89□□□□□ -1.79
Smarca1Q6PGB8 Prl4a1-201ENSMUST00000021779 876 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Smarca1Q6PGB8 AC153361.2-201ENSMUST00000218188 481 ntTSL 5 BASIC3.89□□□□□ -1.79
Smarca1Q6PGB8 AC139376.1-201ENSMUST00000220056 1250 ntBASIC3.89□□□□□ -1.79
Smarca1Q6PGB8 AC157494.1-201ENSMUST00000221127 549 ntTSL 5 BASIC3.89□□□□□ -1.79
Smarca1Q6PGB8 AC165366.1-201ENSMUST00000225905 505 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
Smarca1Q6PGB8 Rps15a-ps1-201ENSMUST00000071120 393 ntBASIC3.89□□□□□ -1.79
Smarca1Q6PGB8 Adgre4-201ENSMUST00000025004 3491 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Smarca1Q6PGB8 Ccdc73-201ENSMUST00000111114 3944 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Smarca1Q6PGB8 Hhla1-201ENSMUST00000100584 2262 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
Smarca1Q6PGB8 Vmn2r49-201ENSMUST00000108550 2559 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
Smarca1Q6PGB8 Vmn2r47-201ENSMUST00000170131 2559 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Smarca1Q6PGB8 Kctd4-201ENSMUST00000050120 3998 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
Smarca1Q6PGB8 Olfr1370-203ENSMUST00000215357 4285 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
Smarca1Q6PGB8 Ighv3-5-201ENSMUST00000103479 299 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
Smarca1Q6PGB8 Gm25168-201ENSMUST00000104189 132 ntBASIC3.88□□□□□ -1.79
Smarca1Q6PGB8 Gm12492-201ENSMUST00000117665 564 ntBASIC3.88□□□□□ -1.79
Smarca1Q6PGB8 Gm15244-201ENSMUST00000121122 130 ntBASIC3.88□□□□□ -1.79
Smarca1Q6PGB8 Gm13667-201ENSMUST00000132332 617 ntTSL 5 BASIC3.88□□□□□ -1.79
Smarca1Q6PGB8 Etaa1os-202ENSMUST00000148496 388 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
Smarca1Q6PGB8 Gm13775-201ENSMUST00000153865 751 ntTSL 3 BASIC3.88□□□□□ -1.79
Smarca1Q6PGB8 Gm25066-201ENSMUST00000158145 123 ntBASIC3.88□□□□□ -1.79
Smarca1Q6PGB8 Gm24100-201ENSMUST00000178592 79 ntBASIC3.88□□□□□ -1.79
Smarca1Q6PGB8 Gm23379-201ENSMUST00000180026 107 ntBASIC3.88□□□□□ -1.79
Smarca1Q6PGB8 Mir496b-201ENSMUST00000184935 113 ntBASIC3.88□□□□□ -1.79
Smarca1Q6PGB8 Gm18775-201ENSMUST00000190763 586 ntBASIC3.88□□□□□ -1.79
Smarca1Q6PGB8 Gm38356-201ENSMUST00000194313 408 ntBASIC3.88□□□□□ -1.79
Smarca1Q6PGB8 Gm37587-202ENSMUST00000194935 475 ntTSL 3 BASIC3.88□□□□□ -1.79
Smarca1Q6PGB8 Gm43150-201ENSMUST00000200931 636 ntTSL 3 BASIC3.88□□□□□ -1.79
Smarca1Q6PGB8 Gm44016-201ENSMUST00000203463 164 ntBASIC3.88□□□□□ -1.79
Smarca1Q6PGB8 Gm44824-201ENSMUST00000207021 229 ntBASIC3.88□□□□□ -1.79
Smarca1Q6PGB8 Gm36485-201ENSMUST00000214286 464 ntTSL 3 BASIC3.88□□□□□ -1.79
Smarca1Q6PGB8 Gm21007-201ENSMUST00000221024 326 ntBASIC3.88□□□□□ -1.79
Smarca1Q6PGB8 AC164100.1-201ENSMUST00000227214 508 ntBASIC3.88□□□□□ -1.79
Smarca1Q6PGB8 Mir101b-201ENSMUST00000083622 97 ntBASIC3.88□□□□□ -1.79
Smarca1Q6PGB8 Gm10665-201ENSMUST00000098720 966 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
Smarca1Q6PGB8 Gm10670-201ENSMUST00000098744 966 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
Smarca1Q6PGB8 Trdn-208ENSMUST00000219982 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
Smarca1Q6PGB8 Arhgap12-205ENSMUST00000182066 4506 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
Smarca1Q6PGB8 Thoc1-201ENSMUST00000025137 3855 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
Smarca1Q6PGB8 E430014B02Rik-201ENSMUST00000194215 3156 ntBASIC3.88□□□□□ -1.79
Smarca1Q6PGB8 Olfr476-202ENSMUST00000217173 2539 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
Smarca1Q6PGB8 Olfr577-203ENSMUST00000215237 3144 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
Smarca1Q6PGB8 Fbxw21-201ENSMUST00000054925 1512 ntAPPRIS P2 TSL 1 (best) BASIC3.87□□□□□ -1.79
Smarca1Q6PGB8 Ssxb8-201ENSMUST00000101690 518 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
Smarca1Q6PGB8 Gm22771-201ENSMUST00000104449 91 ntBASIC3.87□□□□□ -1.79
Smarca1Q6PGB8 Gm14981-201ENSMUST00000117325 943 ntBASIC3.87□□□□□ -1.79
Smarca1Q6PGB8 Gm12858-201ENSMUST00000121913 208 ntBASIC3.87□□□□□ -1.79
Smarca1Q6PGB8 Gm12898-201ENSMUST00000144407 642 ntTSL 3 BASIC3.87□□□□□ -1.79
Smarca1Q6PGB8 Gm23234-201ENSMUST00000157304 134 ntBASIC3.87□□□□□ -1.79
Smarca1Q6PGB8 Rps24-202ENSMUST00000169826 519 ntAPPRIS ALT1 TSL 1 (best) BASIC3.87□□□□□ -1.79
Smarca1Q6PGB8 Gm20534-201ENSMUST00000172957 172 ntBASIC3.87□□□□□ -1.79
Smarca1Q6PGB8 Mir3964-201ENSMUST00000174898 74 ntBASIC3.87□□□□□ -1.79
Smarca1Q6PGB8 Ang-ps3-201ENSMUST00000177964 433 ntBASIC3.87□□□□□ -1.79
Smarca1Q6PGB8 Gm28597-201ENSMUST00000187664 666 ntBASIC3.87□□□□□ -1.79
Smarca1Q6PGB8 1700066N21Rik-201ENSMUST00000190123 783 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
Smarca1Q6PGB8 Gm18384-201ENSMUST00000195974 808 ntBASIC3.87□□□□□ -1.79
Smarca1Q6PGB8 Gm45232-201ENSMUST00000207811 162 ntBASIC3.87□□□□□ -1.79
Smarca1Q6PGB8 Gm5485-201ENSMUST00000212197 628 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
Smarca1Q6PGB8 AC107808.1-201ENSMUST00000213260 386 ntTSL 3 BASIC3.87□□□□□ -1.79
Smarca1Q6PGB8 AC134334.1-201ENSMUST00000214277 255 ntBASIC3.87□□□□□ -1.79
Smarca1Q6PGB8 Gm18160-201ENSMUST00000214279 827 ntBASIC3.87□□□□□ -1.79
Smarca1Q6PGB8 Gm46193-201ENSMUST00000219399 364 ntBASIC3.87□□□□□ -1.79
Smarca1Q6PGB8 1700024I08Rik-203ENSMUST00000222372 754 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
Smarca1Q6PGB8 4930453C13Rik-201ENSMUST00000222376 765 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
Smarca1Q6PGB8 Gm46367-202ENSMUST00000222771 501 ntTSL 5 BASIC3.87□□□□□ -1.79
Smarca1Q6PGB8 AC102291.2-201ENSMUST00000228083 367 ntBASIC3.87□□□□□ -1.79
Smarca1Q6PGB8 Gm22245-201ENSMUST00000082479 103 ntBASIC3.87□□□□□ -1.79
Smarca1Q6PGB8 Gm26055-201ENSMUST00000083038 107 ntBASIC3.87□□□□□ -1.79
Smarca1Q6PGB8 Gm10161-201ENSMUST00000091506 204 ntBASIC3.87□□□□□ -1.79
Smarca1Q6PGB8 C030005K15Rik-201ENSMUST00000166373 1882 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
Smarca1Q6PGB8 Dock11-203ENSMUST00000115266 6047 ntTSL 5 BASIC3.87□□□□□ -1.79
Smarca1Q6PGB8 Gm42585-201ENSMUST00000198731 4020 ntBASIC3.87□□□□□ -1.79
Smarca1Q6PGB8 Vmn2r-ps104-201ENSMUST00000099416 1671 ntTSL 5 BASIC3.87□□□□□ -1.79
Smarca1Q6PGB8 Csmd3-204ENSMUST00000160658 12460 ntTSL 5 BASIC3.87□□□□□ -1.79
Smarca1Q6PGB8 Gm43016-201ENSMUST00000196628 3150 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
Smarca1Q6PGB8 Cfh-202ENSMUST00000111976 4365 ntAPPRIS P2 TSL 1 (best) BASIC3.86□□□□□ -1.79
Smarca1Q6PGB8 Cfh-201ENSMUST00000066859 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
Smarca1Q6PGB8 Serpina7-201ENSMUST00000033626 2330 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
Smarca1Q6PGB8 Trbv13-1-201ENSMUST00000103268 334 ntAPPRIS ALT2 BASIC3.86□□□□□ -1.79
Smarca1Q6PGB8 Gm26145-201ENSMUST00000104476 127 ntBASIC3.86□□□□□ -1.79
Smarca1Q6PGB8 Gm12268-201ENSMUST00000118398 442 ntBASIC3.86□□□□□ -1.79
Smarca1Q6PGB8 Gm14785-201ENSMUST00000120185 539 ntBASIC3.86□□□□□ -1.79
Smarca1Q6PGB8 Gm13602-201ENSMUST00000122405 493 ntBASIC3.86□□□□□ -1.79
Smarca1Q6PGB8 Gm13748-201ENSMUST00000149820 378 ntTSL 2 BASIC3.86□□□□□ -1.79
Smarca1Q6PGB8 Gm22793-201ENSMUST00000157227 330 ntBASIC3.86□□□□□ -1.79
Smarca1Q6PGB8 Gm22034-201ENSMUST00000157283 134 ntBASIC3.86□□□□□ -1.79
Smarca1Q6PGB8 Gm27592-201ENSMUST00000157729 126 ntBASIC3.86□□□□□ -1.79
Smarca1Q6PGB8 Gm22174-201ENSMUST00000175050 125 ntBASIC3.86□□□□□ -1.79
Smarca1Q6PGB8 Gm22692-201ENSMUST00000175055 125 ntBASIC3.86□□□□□ -1.79
Smarca1Q6PGB8 Gm27634-201ENSMUST00000175060 126 ntBASIC3.86□□□□□ -1.79
Smarca1Q6PGB8 Gm22460-201ENSMUST00000175269 124 ntBASIC3.86□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 80.2 ms