Protein–RNA interactions for Protein: Q6IRU2

Tpm4, Tropomyosin alpha-4 chain, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm4Q6IRU2 Gm13627-201ENSMUST00000119700 706 ntBASIC2.53□□□□□ -2
Tpm4Q6IRU2 Gm22534-201ENSMUST00000158173 104 ntBASIC2.53□□□□□ -2
Tpm4Q6IRU2 Mir1264-201ENSMUST00000175381 86 ntBASIC2.53□□□□□ -2
Tpm4Q6IRU2 4930505G20Rik-201ENSMUST00000176582 561 ntTSL 1 (best) BASIC2.53□□□□□ -2
Tpm4Q6IRU2 Gm27760-201ENSMUST00000185048 114 ntBASIC2.53□□□□□ -2
Tpm4Q6IRU2 Gm21489-201ENSMUST00000189668 818 ntBASIC2.53□□□□□ -2
Tpm4Q6IRU2 Gm29523-201ENSMUST00000191415 699 ntBASIC2.53□□□□□ -2
Tpm4Q6IRU2 Igkv20-101-2-201ENSMUST00000200406 339 ntAPPRIS P1 BASIC2.53□□□□□ -2
Tpm4Q6IRU2 Olfr496-ps1-201ENSMUST00000208862 915 ntBASIC2.53□□□□□ -2
Tpm4Q6IRU2 Spata4-201ENSMUST00000033917 1057 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Tpm4Q6IRU2 Olfr829-201ENSMUST00000058411 966 ntAPPRIS P2 BASIC2.53□□□□□ -2
Tpm4Q6IRU2 Zfp982-201ENSMUST00000063704 1244 ntAPPRIS P1 TSL 3 BASIC2.53□□□□□ -2
Tpm4Q6IRU2 Gm10147-201ENSMUST00000075388 864 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Tpm4Q6IRU2 Gm24661-201ENSMUST00000083205 104 ntBASIC2.53□□□□□ -2
Tpm4Q6IRU2 Gm10343-201ENSMUST00000096279 348 ntBASIC2.53□□□□□ -2
Tpm4Q6IRU2 Vdac3-ps1-201ENSMUST00000099736 853 ntBASIC2.53□□□□□ -2
Tpm4Q6IRU2 Olfr1450-203ENSMUST00000213925 3075 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2.01
Tpm4Q6IRU2 Olfr1097-201ENSMUST00000111576 4705 ntAPPRIS P1 TSL 3 BASIC2.52□□□□□ -2.01
Tpm4Q6IRU2 Gm25560-201ENSMUST00000104606 176 ntBASIC2.52□□□□□ -2.01
Tpm4Q6IRU2 Gm16100-201ENSMUST00000120489 231 ntBASIC2.52□□□□□ -2.01
Tpm4Q6IRU2 Gm9225-201ENSMUST00000121921 836 ntBASIC2.52□□□□□ -2.01
Tpm4Q6IRU2 Gm13200-201ENSMUST00000138802 258 ntTSL 3 BASIC2.52□□□□□ -2.01
Tpm4Q6IRU2 1700071G01Rik-201ENSMUST00000146728 367 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
Tpm4Q6IRU2 Gm16510-201ENSMUST00000153501 249 ntBASIC2.52□□□□□ -2.01
Tpm4Q6IRU2 Gm16326-201ENSMUST00000162843 414 ntBASIC2.52□□□□□ -2.01
Tpm4Q6IRU2 Gm16561-201ENSMUST00000163001 192 ntBASIC2.52□□□□□ -2.01
Tpm4Q6IRU2 Gm6788-201ENSMUST00000166459 270 ntBASIC2.52□□□□□ -2.01
Tpm4Q6IRU2 Prol1-201ENSMUST00000170832 1163 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
Tpm4Q6IRU2 Hmga1b-202ENSMUST00000178955 120 ntBASIC2.52□□□□□ -2.01
Tpm4Q6IRU2 Gm21294-201ENSMUST00000186443 934 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Tpm4Q6IRU2 4930521E06Rik-201ENSMUST00000186732 905 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
Tpm4Q6IRU2 Gm20888-202ENSMUST00000186890 919 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
Tpm4Q6IRU2 Npn2-202ENSMUST00000189275 235 ntBASIC2.52□□□□□ -2.01
Tpm4Q6IRU2 Gm21497-201ENSMUST00000189455 919 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
Tpm4Q6IRU2 Gm28788-201ENSMUST00000189717 375 ntBASIC2.52□□□□□ -2.01
Tpm4Q6IRU2 Gm29558-201ENSMUST00000190134 375 ntBASIC2.52□□□□□ -2.01
Tpm4Q6IRU2 Gm20811-201ENSMUST00000190500 553 ntBASIC2.52□□□□□ -2.01
Tpm4Q6IRU2 1700052H01Rik-202ENSMUST00000196973 429 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
Tpm4Q6IRU2 Gm42828-201ENSMUST00000199669 469 ntBASIC2.52□□□□□ -2.01
Tpm4Q6IRU2 AC192334.1-201ENSMUST00000221832 1268 ntTSL 5 BASIC2.52□□□□□ -2.01
Tpm4Q6IRU2 AC132881.2-201ENSMUST00000225474 709 ntBASIC2.52□□□□□ -2.01
Tpm4Q6IRU2 AC124524.1-201ENSMUST00000225833 181 ntBASIC2.52□□□□□ -2.01
Tpm4Q6IRU2 AC124104.1-201ENSMUST00000226279 417 ntBASIC2.52□□□□□ -2.01
Tpm4Q6IRU2 Pmis2-201ENSMUST00000051495 699 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
Tpm4Q6IRU2 Olfr204-201ENSMUST00000072517 918 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Tpm4Q6IRU2 AU041133-201ENSMUST00000105314 1494 ntTSL 5 BASIC2.52□□□□□ -2.01
Tpm4Q6IRU2 1700006A11Rik-201ENSMUST00000029598 2161 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
Tpm4Q6IRU2 Zfp971-202ENSMUST00000108926 1413 ntAPPRIS P1 TSL 3 BASIC2.51□□□□□ -2.01
Tpm4Q6IRU2 Gm773-201ENSMUST00000101561 951 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
Tpm4Q6IRU2 Mir804-201ENSMUST00000103251 95 ntBASIC2.51□□□□□ -2.01
Tpm4Q6IRU2 Gm12386-201ENSMUST00000117380 688 ntBASIC2.51□□□□□ -2.01
Tpm4Q6IRU2 Gm2288-201ENSMUST00000118560 638 ntBASIC2.51□□□□□ -2.01
Tpm4Q6IRU2 Gm12383-201ENSMUST00000120628 760 ntBASIC2.51□□□□□ -2.01
Tpm4Q6IRU2 Gm22390-201ENSMUST00000157588 325 ntBASIC2.51□□□□□ -2.01
Tpm4Q6IRU2 Gm25910-201ENSMUST00000157620 140 ntBASIC2.51□□□□□ -2.01
Tpm4Q6IRU2 Gm23476-201ENSMUST00000158881 274 ntBASIC2.51□□□□□ -2.01
Tpm4Q6IRU2 Vmn2r-ps76-201ENSMUST00000173876 739 ntBASIC2.51□□□□□ -2.01
Tpm4Q6IRU2 Vmn1r-ps27-201ENSMUST00000174619 985 ntBASIC2.51□□□□□ -2.01
Tpm4Q6IRU2 Gm20660-201ENSMUST00000177515 289 ntBASIC2.51□□□□□ -2.01
Tpm4Q6IRU2 Gm20594-201ENSMUST00000179797 449 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
Tpm4Q6IRU2 Gm29554-201ENSMUST00000187922 821 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Tpm4Q6IRU2 Tas2r146-ps1-201ENSMUST00000203065 934 ntBASIC2.51□□□□□ -2.01
Tpm4Q6IRU2 Gm46436-201ENSMUST00000221851 1294 ntBASIC2.51□□□□□ -2.01
Tpm4Q6IRU2 AC158395.1-201ENSMUST00000227206 452 ntBASIC2.51□□□□□ -2.01
Tpm4Q6IRU2 Scgb1b2-201ENSMUST00000080635 424 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
Tpm4Q6IRU2 Olfr1477-202ENSMUST00000217001 4000 ntAPPRIS P1 TSL 2 BASIC2.51□□□□□ -2.01
Tpm4Q6IRU2 Knl1-202ENSMUST00000028802 7800 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Tpm4Q6IRU2 Gm18751-201ENSMUST00000185777 2013 ntBASIC2.51□□□□□ -2.01
Tpm4Q6IRU2 Tlr7-201ENSMUST00000060719 3776 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
Tpm4Q6IRU2 Gm15314-201ENSMUST00000120740 1887 ntBASIC2.5□□□□□ -2.01
Tpm4Q6IRU2 Acer3-202ENSMUST00000120520 3964 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
Tpm4Q6IRU2 Olfr1161-203ENSMUST00000217006 3647 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
Tpm4Q6IRU2 Mir344c-201ENSMUST00000103919 92 ntBASIC2.5□□□□□ -2.01
Tpm4Q6IRU2 Olfr1094-201ENSMUST00000105211 1147 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
Tpm4Q6IRU2 Gm25270-201ENSMUST00000122606 138 ntBASIC2.5□□□□□ -2.01
Tpm4Q6IRU2 Gm12238-201ENSMUST00000127764 124 ntBASIC2.5□□□□□ -2.01
Tpm4Q6IRU2 Naa60-211ENSMUST00000176625 876 ntTSL 2 BASIC2.5□□□□□ -2.01
Tpm4Q6IRU2 Mir7k-201ENSMUST00000184115 110 ntBASIC2.5□□□□□ -2.01
Tpm4Q6IRU2 Olfr576-202ENSMUST00000185326 927 ntTSL 5 BASIC2.5□□□□□ -2.01
Tpm4Q6IRU2 1700101O22Rik-201ENSMUST00000187396 339 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
Tpm4Q6IRU2 Gm7897-201ENSMUST00000193981 554 ntBASIC2.5□□□□□ -2.01
Tpm4Q6IRU2 Gm9632-201ENSMUST00000195934 643 ntBASIC2.5□□□□□ -2.01
Tpm4Q6IRU2 AC101984.1-201ENSMUST00000219639 402 ntBASIC2.5□□□□□ -2.01
Tpm4Q6IRU2 AC126275.1-201ENSMUST00000224881 446 ntBASIC2.5□□□□□ -2.01
Tpm4Q6IRU2 AC154506.1-201ENSMUST00000225178 621 ntBASIC2.5□□□□□ -2.01
Tpm4Q6IRU2 Usp9y-201ENSMUST00000091188 8094 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
Tpm4Q6IRU2 Fnd3c2-201ENSMUST00000091282 3662 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
Tpm4Q6IRU2 Gm38071-201ENSMUST00000195792 3378 ntBASIC2.5□□□□□ -2.01
Tpm4Q6IRU2 AC154386.1-201ENSMUST00000222753 2871 ntBASIC2.5□□□□□ -2.01
Tpm4Q6IRU2 Olfr812-203ENSMUST00000205013 1718 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
Tpm4Q6IRU2 Gm12509-201ENSMUST00000118033 609 ntBASIC2.49□□□□□ -2.01
Tpm4Q6IRU2 Olfr381-202ENSMUST00000119863 1065 ntAPPRIS P1 TSL 3 BASIC2.49□□□□□ -2.01
Tpm4Q6IRU2 Vmn1r-ps106-201ENSMUST00000120587 824 ntBASIC2.49□□□□□ -2.01
Tpm4Q6IRU2 Gm12721-201ENSMUST00000120621 268 ntBASIC2.49□□□□□ -2.01
Tpm4Q6IRU2 Gm7350-201ENSMUST00000120964 636 ntBASIC2.49□□□□□ -2.01
Tpm4Q6IRU2 Gm12001-201ENSMUST00000121727 913 ntBASIC2.49□□□□□ -2.01
Tpm4Q6IRU2 Gm15466-201ENSMUST00000122299 333 ntBASIC2.49□□□□□ -2.01
Tpm4Q6IRU2 Gm15870-201ENSMUST00000132657 644 ntTSL 3 BASIC2.49□□□□□ -2.01
Tpm4Q6IRU2 1700073E17Rik-202ENSMUST00000146858 382 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
Tpm4Q6IRU2 Gm24691-201ENSMUST00000157762 140 ntBASIC2.49□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 113 ms