Protein–RNA interactions for Protein: Q62158

Trim27, Zinc finger protein RFP, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim27Q62158 Gm12723-201ENSMUST00000120700 451 ntBASIC3.72□□□□□ -1.81
Trim27Q62158 Gm13341-201ENSMUST00000120780 672 ntBASIC3.72□□□□□ -1.81
Trim27Q62158 Gm12639-201ENSMUST00000121400 493 ntBASIC3.72□□□□□ -1.81
Trim27Q62158 Gm13943-201ENSMUST00000144043 343 ntTSL 5 BASIC3.72□□□□□ -1.81
Trim27Q62158 Gm15903-201ENSMUST00000155796 310 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
Trim27Q62158 Gm23538-201ENSMUST00000157535 101 ntBASIC3.72□□□□□ -1.81
Trim27Q62158 Gm23865-201ENSMUST00000157723 97 ntBASIC3.72□□□□□ -1.81
Trim27Q62158 Gm22961-201ENSMUST00000157964 106 ntBASIC3.72□□□□□ -1.81
Trim27Q62158 Gm22765-201ENSMUST00000158371 128 ntBASIC3.72□□□□□ -1.81
Trim27Q62158 Gm22766-201ENSMUST00000158372 99 ntBASIC3.72□□□□□ -1.81
Trim27Q62158 Gm25902-201ENSMUST00000158493 318 ntBASIC3.72□□□□□ -1.81
Trim27Q62158 B230216N24Rik-202ENSMUST00000159353 345 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
Trim27Q62158 Naa60-211ENSMUST00000176625 876 ntTSL 2 BASIC3.72□□□□□ -1.81
Trim27Q62158 Mir5123-201ENSMUST00000177794 83 ntBASIC3.72□□□□□ -1.81
Trim27Q62158 Gm37946-201ENSMUST00000192064 347 ntBASIC3.72□□□□□ -1.81
Trim27Q62158 Gm37291-201ENSMUST00000195637 533 ntTSL 5 BASIC3.72□□□□□ -1.81
Trim27Q62158 Gm43704-201ENSMUST00000196164 496 ntBASIC3.72□□□□□ -1.81
Trim27Q62158 Gm44118-201ENSMUST00000204665 229 ntBASIC3.72□□□□□ -1.81
Trim27Q62158 Gm44964-201ENSMUST00000207011 273 ntBASIC3.72□□□□□ -1.81
Trim27Q62158 AC121844.1-201ENSMUST00000218706 137 ntBASIC3.72□□□□□ -1.81
Trim27Q62158 4930567K20Rik-203ENSMUST00000220108 646 ntTSL 5 BASIC3.72□□□□□ -1.81
Trim27Q62158 Olfr188-ps1-202ENSMUST00000220235 925 ntBASIC3.72□□□□□ -1.81
Trim27Q62158 AC192616.1-201ENSMUST00000221922 132 ntBASIC3.72□□□□□ -1.81
Trim27Q62158 CT571268.1-201ENSMUST00000222320 407 ntBASIC3.72□□□□□ -1.81
Trim27Q62158 AC102352.1-201ENSMUST00000224187 582 ntBASIC3.72□□□□□ -1.81
Trim27Q62158 CT485608.1-201ENSMUST00000228759 389 ntBASIC3.72□□□□□ -1.81
Trim27Q62158 Olfr251-201ENSMUST00000072731 951 ntAPPRIS P2 BASIC3.72□□□□□ -1.81
Trim27Q62158 Mir21a-201ENSMUST00000083521 92 ntBASIC3.72□□□□□ -1.81
Trim27Q62158 Gm23850-201ENSMUST00000083830 169 ntBASIC3.72□□□□□ -1.81
Trim27Q62158 Olfr561-201ENSMUST00000098217 1071 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
Trim27Q62158 Vmn1r13-203ENSMUST00000227298 5203 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
Trim27Q62158 Vmn1r13-204ENSMUST00000227421 5235 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
Trim27Q62158 Olfr107-203ENSMUST00000215947 3954 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
Trim27Q62158 Gm45262-201ENSMUST00000209917 1463 ntBASIC3.72□□□□□ -1.81
Trim27Q62158 Olfr814-203ENSMUST00000216966 3819 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
Trim27Q62158 1700008H02Rik-201ENSMUST00000201220 1684 ntBASIC3.71□□□□□ -1.81
Trim27Q62158 Ifi203-ps-201ENSMUST00000155076 2556 ntBASIC3.71□□□□□ -1.81
Trim27Q62158 Slco6c1-202ENSMUST00000189547 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
Trim27Q62158 Gabra2-203ENSMUST00000197284 5852 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Trim27Q62158 Gm43016-201ENSMUST00000196628 3150 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
Trim27Q62158 Mir582-201ENSMUST00000103758 81 ntBASIC3.71□□□□□ -1.82
Trim27Q62158 Gm13803-201ENSMUST00000117547 489 ntBASIC3.71□□□□□ -1.82
Trim27Q62158 Gm15177-201ENSMUST00000120491 577 ntBASIC3.71□□□□□ -1.82
Trim27Q62158 Gm14775-201ENSMUST00000122089 310 ntBASIC3.71□□□□□ -1.82
Trim27Q62158 Gm24517-201ENSMUST00000122560 107 ntBASIC3.71□□□□□ -1.82
Trim27Q62158 Gm22322-201ENSMUST00000157151 111 ntBASIC3.71□□□□□ -1.82
Trim27Q62158 Hmgb3-ps-201ENSMUST00000162465 601 ntBASIC3.71□□□□□ -1.82
Trim27Q62158 Vmn2r-ps84-201ENSMUST00000173377 897 ntBASIC3.71□□□□□ -1.82
Trim27Q62158 Vmn2r-ps80-201ENSMUST00000173697 914 ntBASIC3.71□□□□□ -1.82
Trim27Q62158 Mir6338-201ENSMUST00000183389 109 ntBASIC3.71□□□□□ -1.82
Trim27Q62158 Gm27999-201ENSMUST00000183539 193 ntBASIC3.71□□□□□ -1.82
Trim27Q62158 Gm27535-201ENSMUST00000183814 157 ntBASIC3.71□□□□□ -1.82
Trim27Q62158 Mir6383-201ENSMUST00000184545 116 ntBASIC3.71□□□□□ -1.82
Trim27Q62158 Mir6372-201ENSMUST00000185114 109 ntBASIC3.71□□□□□ -1.82
Trim27Q62158 Gm29576-201ENSMUST00000188020 678 ntBASIC3.71□□□□□ -1.82
Trim27Q62158 Gm29423-207ENSMUST00000189580 255 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
Trim27Q62158 Gm28354-201ENSMUST00000190904 678 ntBASIC3.71□□□□□ -1.82
Trim27Q62158 Nras-ps2-201ENSMUST00000195269 178 ntBASIC3.71□□□□□ -1.82
Trim27Q62158 Gm18384-201ENSMUST00000195974 808 ntBASIC3.71□□□□□ -1.82
Trim27Q62158 Gm42805-201ENSMUST00000196158 276 ntBASIC3.71□□□□□ -1.82
Trim27Q62158 Gm43115-201ENSMUST00000196244 160 ntBASIC3.71□□□□□ -1.82
Trim27Q62158 Traj57-202ENSMUST00000196977 63 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Trim27Q62158 Gm45941-201ENSMUST00000221907 675 ntTSL 3 BASIC3.71□□□□□ -1.82
Trim27Q62158 Gm7745-202ENSMUST00000222914 567 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
Trim27Q62158 AC117814.1-201ENSMUST00000226135 352 ntBASIC3.71□□□□□ -1.82
Trim27Q62158 Gm23448-201ENSMUST00000083151 104 ntBASIC3.71□□□□□ -1.82
Trim27Q62158 Olfr619-201ENSMUST00000098196 1124 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Trim27Q62158 Olfr732-202ENSMUST00000213701 3862 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
Trim27Q62158 Olfr1097-201ENSMUST00000111576 4705 ntAPPRIS P1 TSL 3 BASIC3.71□□□□□ -1.82
Trim27Q62158 AI504432-201ENSMUST00000070085 5569 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
Trim27Q62158 Olfr913-201ENSMUST00000081095 2441 ntAPPRIS P1 TSL 3 BASIC3.71□□□□□ -1.82
Trim27Q62158 Gm15302-201ENSMUST00000117779 2630 ntBASIC3.71□□□□□ -1.82
Trim27Q62158 Scai-201ENSMUST00000038874 10709 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Trim27Q62158 Vmn1r71-207ENSMUST00000228248 5469 ntAPPRIS P2 BASIC3.7□□□□□ -1.82
Trim27Q62158 Gm37983-201ENSMUST00000193207 2006 ntBASIC3.7□□□□□ -1.82
Trim27Q62158 Gm29674-202ENSMUST00000219664 4083 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Trim27Q62158 Nlrp9a-201ENSMUST00000071780 3125 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
Trim27Q62158 Gm42684-201ENSMUST00000197663 3615 ntBASIC3.7□□□□□ -1.82
Trim27Q62158 Mir499-201ENSMUST00000102357 79 ntBASIC3.7□□□□□ -1.82
Trim27Q62158 Gm15659-201ENSMUST00000118881 341 ntBASIC3.7□□□□□ -1.82
Trim27Q62158 4933406D12Rik-201ENSMUST00000147212 737 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Trim27Q62158 Vmn1r-ps49-201ENSMUST00000177009 879 ntBASIC3.7□□□□□ -1.82
Trim27Q62158 Gm20651-201ENSMUST00000177219 329 ntBASIC3.7□□□□□ -1.82
Trim27Q62158 Gm8220-203ENSMUST00000177877 381 ntTSL 5 BASIC3.7□□□□□ -1.82
Trim27Q62158 Mir6541-201ENSMUST00000183649 110 ntBASIC3.7□□□□□ -1.82
Trim27Q62158 Gm29633-204ENSMUST00000187737 675 ntTSL 5 BASIC3.7□□□□□ -1.82
Trim27Q62158 Gm43489-201ENSMUST00000196810 993 ntBASIC3.7□□□□□ -1.82
Trim27Q62158 Gm44208-201ENSMUST00000205199 421 ntBASIC3.7□□□□□ -1.82
Trim27Q62158 Gm44594-201ENSMUST00000208982 407 ntBASIC3.7□□□□□ -1.82
Trim27Q62158 AC118639.1-201ENSMUST00000227204 338 ntBASIC3.7□□□□□ -1.82
Trim27Q62158 Defb41-202ENSMUST00000097817 198 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Trim27Q62158 Spata31-201ENSMUST00000070216 3232 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Trim27Q62158 Olfr1051-202ENSMUST00000216432 2807 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Trim27Q62158 Olfr1051-203ENSMUST00000217245 2821 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Trim27Q62158 Olfr1051-204ENSMUST00000217294 2840 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Trim27Q62158 Gm14416-201ENSMUST00000118630 2308 ntBASIC3.7□□□□□ -1.82
Trim27Q62158 Ppp1r42-201ENSMUST00000027049 1425 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Trim27Q62158 Fnd3c2-201ENSMUST00000091282 3662 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
Trim27Q62158 Olfr657-203ENSMUST00000215454 2397 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Trim27Q62158 Olfr1039-202ENSMUST00000214364 3925 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 81.6 ms