Protein–RNA interactions for Protein: Q61164

Ctcf, Transcriptional repressor CTCF, mousemouse

Known RBP Predictions only

Length 736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtcfQ61164 Mir690-201ENSMUST00000102110 109 ntBASIC3.85□□□□□ -1.79
CtcfQ61164 Gm23175-201ENSMUST00000104371 132 ntBASIC3.85□□□□□ -1.79
CtcfQ61164 Prl3c1-202ENSMUST00000110364 850 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
CtcfQ61164 Gm22032-201ENSMUST00000116946 116 ntBASIC3.85□□□□□ -1.79
CtcfQ61164 Gm12693-201ENSMUST00000121965 483 ntBASIC3.85□□□□□ -1.79
CtcfQ61164 Gm23887-201ENSMUST00000122683 172 ntBASIC3.85□□□□□ -1.79
CtcfQ61164 Gm4916-201ENSMUST00000126139 642 ntBASIC3.85□□□□□ -1.79
CtcfQ61164 Gm25967-201ENSMUST00000157168 147 ntBASIC3.85□□□□□ -1.79
CtcfQ61164 Gm23602-201ENSMUST00000157258 132 ntBASIC3.85□□□□□ -1.79
CtcfQ61164 Gm25572-201ENSMUST00000157527 172 ntBASIC3.85□□□□□ -1.79
CtcfQ61164 Gm24998-201ENSMUST00000157908 89 ntBASIC3.85□□□□□ -1.79
CtcfQ61164 Gm23782-201ENSMUST00000157939 120 ntBASIC3.85□□□□□ -1.79
CtcfQ61164 Ifi213-205ENSMUST00000180215 643 ntAPPRIS P2 TSL 3 BASIC3.85□□□□□ -1.79
CtcfQ61164 Mir6408-201ENSMUST00000183643 91 ntBASIC3.85□□□□□ -1.79
CtcfQ61164 Gm29408-201ENSMUST00000187536 216 ntBASIC3.85□□□□□ -1.79
CtcfQ61164 Gm8197-201ENSMUST00000192906 363 ntTSL 5 BASIC3.85□□□□□ -1.79
CtcfQ61164 Gm37104-201ENSMUST00000193278 196 ntBASIC3.85□□□□□ -1.79
CtcfQ61164 Gm37791-201ENSMUST00000195081 286 ntBASIC3.85□□□□□ -1.79
CtcfQ61164 Mirlet7f-1-201ENSMUST00000198652 89 ntBASIC3.85□□□□□ -1.79
CtcfQ61164 Snhg1-208ENSMUST00000206029 408 ntTSL 3 BASIC3.85□□□□□ -1.79
CtcfQ61164 Gm5322-201ENSMUST00000206142 699 ntBASIC3.85□□□□□ -1.79
CtcfQ61164 Gm44864-201ENSMUST00000207292 505 ntTSL 2 BASIC3.85□□□□□ -1.79
CtcfQ61164 Gm45380-201ENSMUST00000210465 315 ntBASIC3.85□□□□□ -1.79
CtcfQ61164 E330011O21Rik-203ENSMUST00000210555 455 ntTSL 5 BASIC3.85□□□□□ -1.79
CtcfQ61164 Gm2628-201ENSMUST00000218019 426 ntBASIC3.85□□□□□ -1.79
CtcfQ61164 AC139376.1-201ENSMUST00000220056 1250 ntBASIC3.85□□□□□ -1.79
CtcfQ61164 AC167669.1-201ENSMUST00000224932 384 ntBASIC3.85□□□□□ -1.79
CtcfQ61164 AC154598.1-201ENSMUST00000227079 347 ntBASIC3.85□□□□□ -1.79
CtcfQ61164 Gm22265-201ENSMUST00000082947 116 ntBASIC3.85□□□□□ -1.79
CtcfQ61164 Vmn1r87-201ENSMUST00000094827 888 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
CtcfQ61164 Olfr1043-204ENSMUST00000216028 1824 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
CtcfQ61164 Nlrp14-201ENSMUST00000084763 3272 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CtcfQ61164 A530053G22Rik-201ENSMUST00000060147 1526 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CtcfQ61164 Olfr1231-202ENSMUST00000216144 3961 ntAPPRIS P1 TSL 3 BASIC3.85□□□□□ -1.79
CtcfQ61164 A630033H20Rik-205ENSMUST00000167673 3044 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.79
CtcfQ61164 Gm43268-201ENSMUST00000201536 4055 ntBASIC3.84□□□□□ -1.79
CtcfQ61164 Gm6096-201ENSMUST00000105172 456 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
CtcfQ61164 Zfp972-203ENSMUST00000108986 192 ntTSL 5 BASIC3.84□□□□□ -1.79
CtcfQ61164 Hnmt-202ENSMUST00000114497 994 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
CtcfQ61164 Gm14197-201ENSMUST00000117480 1049 ntBASIC3.84□□□□□ -1.79
CtcfQ61164 Gm13122-201ENSMUST00000118380 453 ntBASIC3.84□□□□□ -1.79
CtcfQ61164 Gm14119-201ENSMUST00000119511 235 ntBASIC3.84□□□□□ -1.79
CtcfQ61164 Gm7219-201ENSMUST00000119619 297 ntBASIC3.84□□□□□ -1.79
CtcfQ61164 Gm13692-201ENSMUST00000120774 371 ntBASIC3.84□□□□□ -1.79
CtcfQ61164 Gm25807-201ENSMUST00000122783 305 ntBASIC3.84□□□□□ -1.79
CtcfQ61164 Gm16212-202ENSMUST00000143555 420 ntTSL 3 BASIC3.84□□□□□ -1.79
CtcfQ61164 Gm2343-201ENSMUST00000161177 1042 ntBASIC3.84□□□□□ -1.79
CtcfQ61164 Gm17183-201ENSMUST00000171170 493 ntBASIC3.84□□□□□ -1.79
CtcfQ61164 Ang-ps3-201ENSMUST00000177964 433 ntBASIC3.84□□□□□ -1.79
CtcfQ61164 Gm21737-201ENSMUST00000178112 664 ntBASIC3.84□□□□□ -1.79
CtcfQ61164 Gm20874-201ENSMUST00000178356 663 ntBASIC3.84□□□□□ -1.79
CtcfQ61164 Gm21744-201ENSMUST00000178403 662 ntBASIC3.84□□□□□ -1.79
CtcfQ61164 Gm20901-201ENSMUST00000180177 664 ntBASIC3.84□□□□□ -1.79
CtcfQ61164 Ranbp2-ps3-201ENSMUST00000183549 388 ntBASIC3.84□□□□□ -1.79
CtcfQ61164 Mir6951-201ENSMUST00000183910 75 ntBASIC3.84□□□□□ -1.79
CtcfQ61164 Tardbp-223ENSMUST00000189048 1096 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CtcfQ61164 Gm28090-201ENSMUST00000189458 664 ntBASIC3.84□□□□□ -1.79
CtcfQ61164 Gm21647-201ENSMUST00000189755 664 ntBASIC3.84□□□□□ -1.79
CtcfQ61164 1700066N21Rik-201ENSMUST00000190123 783 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CtcfQ61164 Gm38075-201ENSMUST00000191979 920 ntBASIC3.84□□□□□ -1.79
CtcfQ61164 Gm37603-201ENSMUST00000192368 219 ntBASIC3.84□□□□□ -1.79
CtcfQ61164 Ighv1-28-201ENSMUST00000192987 351 ntBASIC3.84□□□□□ -1.79
CtcfQ61164 Gm37575-201ENSMUST00000195467 309 ntBASIC3.84□□□□□ -1.79
CtcfQ61164 Gm18971-201ENSMUST00000197240 374 ntBASIC3.84□□□□□ -1.79
CtcfQ61164 Igkv14-134-1-201ENSMUST00000199111 331 ntBASIC3.84□□□□□ -1.79
CtcfQ61164 Gm43513-201ENSMUST00000199779 1076 ntBASIC3.84□□□□□ -1.79
CtcfQ61164 Scoc-204ENSMUST00000212449 280 ntTSL 3 BASIC3.84□□□□□ -1.79
CtcfQ61164 AL929417.1-201ENSMUST00000214901 124 ntBASIC3.84□□□□□ -1.79
CtcfQ61164 AC091764.3-201ENSMUST00000219646 300 ntTSL 5 BASIC3.84□□□□□ -1.79
CtcfQ61164 AC154224.1-201ENSMUST00000224367 403 ntBASIC3.84□□□□□ -1.79
CtcfQ61164 AC174797.3-202ENSMUST00000224578 587 ntBASIC3.84□□□□□ -1.79
CtcfQ61164 AC164883.9-201ENSMUST00000228042 399 ntBASIC3.84□□□□□ -1.79
CtcfQ61164 Olfr967-201ENSMUST00000069561 933 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
CtcfQ61164 4930522H14Rik-201ENSMUST00000082306 849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
CtcfQ61164 Cyp3a41b-201ENSMUST00000075837 2064 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CtcfQ61164 Gm11782-201ENSMUST00000131675 2804 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CtcfQ61164 Gm42446-201ENSMUST00000199783 3284 ntBASIC3.83□□□□□ -1.8
CtcfQ61164 Gm3940-201ENSMUST00000105087 432 ntBASIC3.83□□□□□ -1.8
CtcfQ61164 Gm12149-201ENSMUST00000117511 654 ntBASIC3.83□□□□□ -1.8
CtcfQ61164 Gm13228-201ENSMUST00000118937 634 ntBASIC3.83□□□□□ -1.8
CtcfQ61164 Gm15231-201ENSMUST00000119174 447 ntBASIC3.83□□□□□ -1.8
CtcfQ61164 Gm14915-201ENSMUST00000120747 204 ntBASIC3.83□□□□□ -1.8
CtcfQ61164 Gm11438-201ENSMUST00000121582 189 ntBASIC3.83□□□□□ -1.8
CtcfQ61164 Rhox11-ps1-201ENSMUST00000121945 387 ntBASIC3.83□□□□□ -1.8
CtcfQ61164 Gm11254-201ENSMUST00000122368 653 ntBASIC3.83□□□□□ -1.8
CtcfQ61164 Gm12150-201ENSMUST00000130874 468 ntTSL 3 BASIC3.83□□□□□ -1.8
CtcfQ61164 Gm14951-201ENSMUST00000143622 570 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CtcfQ61164 Gm22236-201ENSMUST00000157093 106 ntBASIC3.83□□□□□ -1.8
CtcfQ61164 Gm25438-201ENSMUST00000158281 110 ntBASIC3.83□□□□□ -1.8
CtcfQ61164 Cylc2-203ENSMUST00000166749 1297 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CtcfQ61164 Mpc1-ps-201ENSMUST00000181662 330 ntBASIC3.83□□□□□ -1.8
CtcfQ61164 Gm27392-201ENSMUST00000185041 101 ntBASIC3.83□□□□□ -1.8
CtcfQ61164 Gm28595-201ENSMUST00000186223 437 ntTSL 5 BASIC3.83□□□□□ -1.8
CtcfQ61164 Gm37343-201ENSMUST00000192542 111 ntBASIC3.83□□□□□ -1.8
CtcfQ61164 Gm37119-201ENSMUST00000195691 389 ntBASIC3.83□□□□□ -1.8
CtcfQ61164 Gm19620-201ENSMUST00000195972 434 ntBASIC3.83□□□□□ -1.8
CtcfQ61164 Gm43525-201ENSMUST00000196460 616 ntTSL 2 BASIC3.83□□□□□ -1.8
CtcfQ61164 2810432F15Rik-201ENSMUST00000198632 657 ntTSL 5 BASIC3.83□□□□□ -1.8
CtcfQ61164 Med7-201ENSMUST00000020665 1193 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CtcfQ61164 Olfr1064-ps1-201ENSMUST00000213670 600 ntBASIC3.83□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 80.1 ms