Protein–RNA interactions for Protein: Q61069

Usf1, Upstream stimulatory factor 1, mousemouse

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usf1Q61069 Rps13-ps7-201ENSMUST00000122045 368 ntBASIC2.74□□□□□ -1.97
Usf1Q61069 Gm4916-201ENSMUST00000126139 642 ntBASIC2.74□□□□□ -1.97
Usf1Q61069 Gm14562-201ENSMUST00000129885 543 ntBASIC2.74□□□□□ -1.97
Usf1Q61069 Gm24358-201ENSMUST00000158424 288 ntBASIC2.74□□□□□ -1.97
Usf1Q61069 Gm22664-201ENSMUST00000158719 105 ntBASIC2.74□□□□□ -1.97
Usf1Q61069 Gm20534-201ENSMUST00000172957 172 ntBASIC2.74□□□□□ -1.97
Usf1Q61069 Obox4-ps35-201ENSMUST00000173825 680 ntTSL 3 BASIC2.74□□□□□ -1.97
Usf1Q61069 Gm23053-201ENSMUST00000175136 96 ntBASIC2.74□□□□□ -1.97
Usf1Q61069 Vmn2r-ps127-201ENSMUST00000175850 1029 ntBASIC2.74□□□□□ -1.97
Usf1Q61069 Gm27007-201ENSMUST00000183264 279 ntTSL 3 BASIC2.74□□□□□ -1.97
Usf1Q61069 Mir7068-201ENSMUST00000183439 74 ntBASIC2.74□□□□□ -1.97
Usf1Q61069 Mir8118-201ENSMUST00000183962 129 ntBASIC2.74□□□□□ -1.97
Usf1Q61069 Gm29633-204ENSMUST00000187737 675 ntTSL 5 BASIC2.74□□□□□ -1.97
Usf1Q61069 Gm37175-201ENSMUST00000192023 587 ntTSL 5 BASIC2.74□□□□□ -1.97
Usf1Q61069 Gm18692-201ENSMUST00000193047 511 ntBASIC2.74□□□□□ -1.97
Usf1Q61069 Gm37979-201ENSMUST00000193065 712 ntBASIC2.74□□□□□ -1.97
Usf1Q61069 Igkv1-115-201ENSMUST00000198714 302 ntBASIC2.74□□□□□ -1.97
Usf1Q61069 Gm45452-201ENSMUST00000210905 177 ntBASIC2.74□□□□□ -1.97
Usf1Q61069 1700061N14Rik-201ENSMUST00000212295 463 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
Usf1Q61069 CAAA01090811.1-201ENSMUST00000216828 277 ntBASIC2.74□□□□□ -1.97
Usf1Q61069 AC091764.1-201ENSMUST00000218029 132 ntTSL 5 BASIC2.74□□□□□ -1.97
Usf1Q61069 Olfr188-ps1-202ENSMUST00000220235 925 ntBASIC2.74□□□□□ -1.97
Usf1Q61069 Gm31849-201ENSMUST00000220306 375 ntBASIC2.74□□□□□ -1.97
Usf1Q61069 AC144942.1-201ENSMUST00000220425 597 ntTSL 5 BASIC2.74□□□□□ -1.97
Usf1Q61069 AC131085.1-201ENSMUST00000224746 656 ntBASIC2.74□□□□□ -1.97
Usf1Q61069 Olfr103-201ENSMUST00000058826 942 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
Usf1Q61069 Gm37387-201ENSMUST00000192201 1806 ntBASIC2.74□□□□□ -1.97
Usf1Q61069 Gm43268-201ENSMUST00000201536 4055 ntBASIC2.74□□□□□ -1.97
Usf1Q61069 Vmn1r46-206ENSMUST00000228401 10955 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
Usf1Q61069 Naaladl2-202ENSMUST00000203414 9330 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
Usf1Q61069 Gm15697-201ENSMUST00000121946 2902 ntBASIC2.73□□□□□ -1.97
Usf1Q61069 Olfr309-202ENSMUST00000174158 3293 ntAPPRIS P1 TSL 2 BASIC2.73□□□□□ -1.97
Usf1Q61069 Gm7869-201ENSMUST00000121457 1322 ntBASIC2.73□□□□□ -1.97
Usf1Q61069 Olfr299-202ENSMUST00000217253 4479 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
Usf1Q61069 Zfp709-201ENSMUST00000034259 2181 ntTSL 5 BASIC2.73□□□□□ -1.97
Usf1Q61069 Chst9-201ENSMUST00000053017 1620 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
Usf1Q61069 Gm25213-201ENSMUST00000102388 113 ntBASIC2.73□□□□□ -1.97
Usf1Q61069 Hnmt-202ENSMUST00000114497 994 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
Usf1Q61069 Olfr1073-ps1-201ENSMUST00000117635 381 ntBASIC2.73□□□□□ -1.97
Usf1Q61069 Gm13454-201ENSMUST00000118166 483 ntBASIC2.73□□□□□ -1.97
Usf1Q61069 Gm14469-201ENSMUST00000118363 202 ntBASIC2.73□□□□□ -1.97
Usf1Q61069 Gm14525-201ENSMUST00000119649 893 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
Usf1Q61069 Gm2005-201ENSMUST00000120759 542 ntBASIC2.73□□□□□ -1.97
Usf1Q61069 Gm15563-201ENSMUST00000124953 410 ntTSL 3 BASIC2.73□□□□□ -1.97
Usf1Q61069 Gm15130-201ENSMUST00000132464 663 ntAPPRIS P1 TSL 3 BASIC2.73□□□□□ -1.97
Usf1Q61069 Gm16274-201ENSMUST00000139251 592 ntBASIC2.73□□□□□ -1.97
Usf1Q61069 Gm16218-201ENSMUST00000155424 388 ntBASIC2.73□□□□□ -1.97
Usf1Q61069 Gm25153-201ENSMUST00000157118 156 ntBASIC2.73□□□□□ -1.97
Usf1Q61069 Gm25666-201ENSMUST00000157702 107 ntBASIC2.73□□□□□ -1.97
Usf1Q61069 Gm17166-201ENSMUST00000172006 431 ntBASIC2.73□□□□□ -1.97
Usf1Q61069 Mir5127-201ENSMUST00000175295 71 ntBASIC2.73□□□□□ -1.97
Usf1Q61069 Gm8926-202ENSMUST00000178158 465 ntAPPRIS ALT2 TSL 5 BASIC2.73□□□□□ -1.97
Usf1Q61069 Gm8879-202ENSMUST00000178863 465 ntTSL 5 BASIC2.73□□□□□ -1.97
Usf1Q61069 Gm8922-202ENSMUST00000178989 465 ntTSL 5 BASIC2.73□□□□□ -1.97
Usf1Q61069 Speer1-202ENSMUST00000179482 465 ntTSL 5 BASIC2.73□□□□□ -1.97
Usf1Q61069 Gm8897-202ENSMUST00000179679 465 ntAPPRIS ALT2 TSL 5 BASIC2.73□□□□□ -1.97
Usf1Q61069 Gm26960-201ENSMUST00000182263 412 ntBASIC2.73□□□□□ -1.97
Usf1Q61069 Fam122c-203ENSMUST00000186314 898 ntAPPRIS P1 TSL 2 BASIC2.73□□□□□ -1.97
Usf1Q61069 Fasl-202ENSMUST00000193648 406 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
Usf1Q61069 Gm43489-201ENSMUST00000196810 993 ntBASIC2.73□□□□□ -1.97
Usf1Q61069 Gm30275-202ENSMUST00000198124 416 ntTSL 3 BASIC2.73□□□□□ -1.97
Usf1Q61069 Gm35570-201ENSMUST00000198730 681 ntBASIC2.73□□□□□ -1.97
Usf1Q61069 Gm44332-201ENSMUST00000203712 433 ntBASIC2.73□□□□□ -1.97
Usf1Q61069 Gm17838-201ENSMUST00000205872 876 ntBASIC2.73□□□□□ -1.97
Usf1Q61069 Gm45023-201ENSMUST00000207951 379 ntBASIC2.73□□□□□ -1.97
Usf1Q61069 Gm45614-201ENSMUST00000209994 721 ntBASIC2.73□□□□□ -1.97
Usf1Q61069 Gm45742-201ENSMUST00000212400 433 ntBASIC2.73□□□□□ -1.97
Usf1Q61069 Gm18892-201ENSMUST00000217628 881 ntBASIC2.73□□□□□ -1.97
Usf1Q61069 AC154636.3-201ENSMUST00000221489 1214 ntBASIC2.73□□□□□ -1.97
Usf1Q61069 LOC667541-201ENSMUST00000223408 278 ntBASIC2.73□□□□□ -1.97
Usf1Q61069 AC168062.2-201ENSMUST00000228907 422 ntBASIC2.73□□□□□ -1.97
Usf1Q61069 Tas2r103-201ENSMUST00000032317 939 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
Usf1Q61069 Spinkl-201ENSMUST00000066328 593 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
Usf1Q61069 Mir465-201ENSMUST00000093563 74 ntBASIC2.73□□□□□ -1.97
Usf1Q61069 Olfr1447-203ENSMUST00000216989 2586 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
Usf1Q61069 Olfr346-202ENSMUST00000213258 4104 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
Usf1Q61069 Olfr630-201ENSMUST00000106880 2198 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
Usf1Q61069 Gm3234-202ENSMUST00000223301 3250 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
Usf1Q61069 Olfr1046-202ENSMUST00000213987 2770 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
Usf1Q61069 Zbtb37-203ENSMUST00000162226 18814 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
Usf1Q61069 Vmn1r178-204ENSMUST00000226640 2282 ntBASIC2.72□□□□□ -1.97
Usf1Q61069 Gm44715-201ENSMUST00000209049 3839 ntBASIC2.72□□□□□ -1.97
Usf1Q61069 Olfr901-203ENSMUST00000216644 2731 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
Usf1Q61069 Olfr1222-202ENSMUST00000214027 2393 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
Usf1Q61069 Olfr483-202ENSMUST00000215159 2691 ntAPPRIS P1 TSL 3 BASIC2.72□□□□□ -1.97
Usf1Q61069 Btla-202ENSMUST00000102802 3251 ntAPPRIS ALT2 TSL 1 (best) BASIC2.72□□□□□ -1.97
Usf1Q61069 Olfr1158-201ENSMUST00000102622 942 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
Usf1Q61069 Gm13046-201ENSMUST00000117391 501 ntBASIC2.72□□□□□ -1.97
Usf1Q61069 Gm15719-201ENSMUST00000120619 635 ntBASIC2.72□□□□□ -1.97
Usf1Q61069 Gm14915-201ENSMUST00000120747 204 ntBASIC2.72□□□□□ -1.97
Usf1Q61069 Gm11456-201ENSMUST00000121070 256 ntBASIC2.72□□□□□ -1.97
Usf1Q61069 Gm650-201ENSMUST00000144428 1551 ntBASIC2.72□□□□□ -1.97
Usf1Q61069 Gm25392-201ENSMUST00000157335 297 ntBASIC2.72□□□□□ -1.97
Usf1Q61069 Gm25902-201ENSMUST00000158493 318 ntBASIC2.72□□□□□ -1.97
Usf1Q61069 Cfap54-204ENSMUST00000164979 945 ntTSL 5 BASIC2.72□□□□□ -1.97
Usf1Q61069 Mir8090-201ENSMUST00000185078 136 ntBASIC2.72□□□□□ -1.97
Usf1Q61069 Gm8392-201ENSMUST00000185647 835 ntBASIC2.72□□□□□ -1.97
Usf1Q61069 Gm7133-201ENSMUST00000187797 2039 ntBASIC2.72□□□□□ -1.97
Usf1Q61069 Gm18956-201ENSMUST00000192857 480 ntBASIC2.72□□□□□ -1.97
Usf1Q61069 Gm43239-201ENSMUST00000200131 201 ntBASIC2.72□□□□□ -1.97
Retrieved 100 of 76,532 protein–RNA pairs in 64.9 ms