Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 Gm15161-201ENSMUST00000117340 387 ntBASIC1.4□□□□□ -2.19
Trav3-1Q5R1I8 Gm13678-201ENSMUST00000118926 340 ntBASIC1.4□□□□□ -2.19
Trav3-1Q5R1I8 Gm6461-201ENSMUST00000120015 633 ntBASIC1.4□□□□□ -2.19
Trav3-1Q5R1I8 Gm14162-201ENSMUST00000121985 601 ntBASIC1.4□□□□□ -2.19
Trav3-1Q5R1I8 Gm15584-201ENSMUST00000123231 759 ntTSL 2 BASIC1.4□□□□□ -2.19
Trav3-1Q5R1I8 2210414B05Rik-201ENSMUST00000139600 872 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
Trav3-1Q5R1I8 Gm15669-201ENSMUST00000147834 526 ntTSL 3 BASIC1.4□□□□□ -2.19
Trav3-1Q5R1I8 Gm23718-201ENSMUST00000157350 307 ntBASIC1.4□□□□□ -2.19
Trav3-1Q5R1I8 Gm25332-201ENSMUST00000158038 105 ntBASIC1.4□□□□□ -2.19
Trav3-1Q5R1I8 Gm16563-201ENSMUST00000162673 423 ntBASIC1.4□□□□□ -2.19
Trav3-1Q5R1I8 Gm21809-201ENSMUST00000178495 468 ntBASIC1.4□□□□□ -2.19
Trav3-1Q5R1I8 Gm5900-201ENSMUST00000179862 375 ntBASIC1.4□□□□□ -2.19
Trav3-1Q5R1I8 Gm28627-201ENSMUST00000186141 453 ntBASIC1.4□□□□□ -2.19
Trav3-1Q5R1I8 4930412E21Rik-201ENSMUST00000194267 778 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
Trav3-1Q5R1I8 Igkv11-114-201ENSMUST00000200013 346 ntBASIC1.4□□□□□ -2.19
Trav3-1Q5R1I8 Gm43578-201ENSMUST00000201250 459 ntBASIC1.4□□□□□ -2.19
Trav3-1Q5R1I8 Gm45539-201ENSMUST00000210313 428 ntBASIC1.4□□□□□ -2.19
Trav3-1Q5R1I8 Gm7034-201ENSMUST00000218638 645 ntBASIC1.4□□□□□ -2.19
Trav3-1Q5R1I8 AC132465.3-201ENSMUST00000219326 195 ntBASIC1.4□□□□□ -2.19
Trav3-1Q5R1I8 AC126043.1-201ENSMUST00000221304 1141 ntBASIC1.4□□□□□ -2.19
Trav3-1Q5R1I8 CT010456.2-201ENSMUST00000222665 1053 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
Trav3-1Q5R1I8 Vmn2r-ps102-203ENSMUST00000222739 604 ntTSL 5 BASIC1.4□□□□□ -2.19
Trav3-1Q5R1I8 AC158525.1-201ENSMUST00000223806 576 ntBASIC1.4□□□□□ -2.19
Trav3-1Q5R1I8 Cox7b2-201ENSMUST00000050129 542 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
Trav3-1Q5R1I8 Vmn1r202-201ENSMUST00000078642 909 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
Trav3-1Q5R1I8 Olfr948-202ENSMUST00000216132 4164 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.19
Trav3-1Q5R1I8 Gm44578-201ENSMUST00000207236 3835 ntBASIC1.39□□□□□ -2.19
Trav3-1Q5R1I8 Olfr969-202ENSMUST00000213266 1597 ntAPPRIS P1 TSL 2 BASIC1.39□□□□□ -2.19
Trav3-1Q5R1I8 Olfr1228-203ENSMUST00000216392 2145 ntAPPRIS ALT2 TSL 5 BASIC1.39□□□□□ -2.19
Trav3-1Q5R1I8 Mir690-201ENSMUST00000102110 109 ntBASIC1.39□□□□□ -2.19
Trav3-1Q5R1I8 Mir599-201ENSMUST00000102378 88 ntBASIC1.39□□□□□ -2.19
Trav3-1Q5R1I8 Gm23911-201ENSMUST00000104596 134 ntBASIC1.39□□□□□ -2.19
Trav3-1Q5R1I8 Gm16400-201ENSMUST00000116523 1029 ntBASIC1.39□□□□□ -2.19
Trav3-1Q5R1I8 Defa-ps1-201ENSMUST00000119062 282 ntBASIC1.39□□□□□ -2.19
Trav3-1Q5R1I8 Gm14322-202ENSMUST00000119838 1077 ntAPPRIS P1 TSL 5 BASIC1.39□□□□□ -2.19
Trav3-1Q5R1I8 Mup-ps1-201ENSMUST00000120720 544 ntBASIC1.39□□□□□ -2.19
Trav3-1Q5R1I8 Gm11438-201ENSMUST00000121582 189 ntBASIC1.39□□□□□ -2.19
Trav3-1Q5R1I8 Gm25292-201ENSMUST00000122797 322 ntBASIC1.39□□□□□ -2.19
Trav3-1Q5R1I8 Gm14418-202ENSMUST00000128657 1077 ntAPPRIS P1 TSL 5 BASIC1.39□□□□□ -2.19
Trav3-1Q5R1I8 Gm12023-201ENSMUST00000145182 520 ntTSL 5 BASIC1.39□□□□□ -2.19
Trav3-1Q5R1I8 Mup-ps4-201ENSMUST00000151005 539 ntBASIC1.39□□□□□ -2.19
Trav3-1Q5R1I8 Mir1934-201ENSMUST00000158127 83 ntBASIC1.39□□□□□ -2.19
Trav3-1Q5R1I8 Defa27-201ENSMUST00000167683 282 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
Trav3-1Q5R1I8 Vmn1r-ps83-201ENSMUST00000172677 705 ntBASIC1.39□□□□□ -2.19
Trav3-1Q5R1I8 Gm22395-201ENSMUST00000177427 96 ntBASIC1.39□□□□□ -2.19
Trav3-1Q5R1I8 Mup-ps11-201ENSMUST00000178040 545 ntBASIC1.39□□□□□ -2.19
Trav3-1Q5R1I8 Mup-ps7-201ENSMUST00000178292 545 ntBASIC1.39□□□□□ -2.19
Trav3-1Q5R1I8 Mup-ps3-201ENSMUST00000178315 545 ntBASIC1.39□□□□□ -2.19
Trav3-1Q5R1I8 Mup-ps8-201ENSMUST00000178663 545 ntBASIC1.39□□□□□ -2.19
Trav3-1Q5R1I8 Mup-ps9-201ENSMUST00000178847 545 ntBASIC1.39□□□□□ -2.19
Trav3-1Q5R1I8 Mup-ps6-201ENSMUST00000179564 545 ntBASIC1.39□□□□□ -2.19
Trav3-1Q5R1I8 Gm27520-201ENSMUST00000184872 81 ntBASIC1.39□□□□□ -2.19
Trav3-1Q5R1I8 Gm29232-201ENSMUST00000189100 297 ntTSL 5 BASIC1.39□□□□□ -2.19
Trav3-1Q5R1I8 Gm19498-201ENSMUST00000191128 331 ntBASIC1.39□□□□□ -2.19
Trav3-1Q5R1I8 Igkv12-49-201ENSMUST00000197714 278 ntBASIC1.39□□□□□ -2.19
Trav3-1Q5R1I8 Igkv14-126-1-201ENSMUST00000199899 346 ntBASIC1.39□□□□□ -2.19
Trav3-1Q5R1I8 Gm43284-201ENSMUST00000200103 253 ntBASIC1.39□□□□□ -2.19
Trav3-1Q5R1I8 Gm43368-201ENSMUST00000200638 409 ntBASIC1.39□□□□□ -2.19
Trav3-1Q5R1I8 Gm43295-201ENSMUST00000201439 412 ntBASIC1.39□□□□□ -2.19
Trav3-1Q5R1I8 Olfr210-ps1-201ENSMUST00000203138 905 ntBASIC1.39□□□□□ -2.19
Trav3-1Q5R1I8 Gm45386-201ENSMUST00000210194 218 ntBASIC1.39□□□□□ -2.19
Trav3-1Q5R1I8 Gm20304-201ENSMUST00000218168 444 ntBASIC1.39□□□□□ -2.19
Trav3-1Q5R1I8 A430103D13Rik-201ENSMUST00000220077 857 ntBASIC1.39□□□□□ -2.19
Trav3-1Q5R1I8 2900042G08Rik-201ENSMUST00000221776 650 ntBASIC1.39□□□□□ -2.19
Trav3-1Q5R1I8 AC158523.2-201ENSMUST00000222708 548 ntBASIC1.39□□□□□ -2.19
Trav3-1Q5R1I8 AC124562.1-201ENSMUST00000224673 337 ntBASIC1.39□□□□□ -2.19
Trav3-1Q5R1I8 Sprr1b-201ENSMUST00000062160 830 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
Trav3-1Q5R1I8 Vmn1r35-201ENSMUST00000071414 891 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
Trav3-1Q5R1I8 Gm21286-201ENSMUST00000098035 545 ntBASIC1.39□□□□□ -2.19
Trav3-1Q5R1I8 Olfr995-201ENSMUST00000099924 1113 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
Trav3-1Q5R1I8 Sult1b1-202ENSMUST00000117455 2612 ntAPPRIS P1 TSL 5 BASIC1.39□□□□□ -2.19
Trav3-1Q5R1I8 Olfr1206-202ENSMUST00000216950 3303 ntAPPRIS P1 TSL 5 BASIC1.39□□□□□ -2.19
Trav3-1Q5R1I8 Gm43665-201ENSMUST00000198672 1659 ntBASIC1.39□□□□□ -2.19
Trav3-1Q5R1I8 Ifi214-203ENSMUST00000139092 2888 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
Trav3-1Q5R1I8 Olfr196-202ENSMUST00000205471 1711 ntAPPRIS P1 TSL 3 BASIC1.38□□□□□ -2.19
Trav3-1Q5R1I8 Gm22939-201ENSMUST00000103958 131 ntBASIC1.38□□□□□ -2.19
Trav3-1Q5R1I8 Klra10-201ENSMUST00000112020 823 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
Trav3-1Q5R1I8 Gm13085-201ENSMUST00000118356 171 ntBASIC1.38□□□□□ -2.19
Trav3-1Q5R1I8 Gm16355-201ENSMUST00000128606 231 ntBASIC1.38□□□□□ -2.19
Trav3-1Q5R1I8 Gm25961-201ENSMUST00000157174 135 ntBASIC1.38□□□□□ -2.19
Trav3-1Q5R1I8 Gm25051-201ENSMUST00000158602 249 ntBASIC1.38□□□□□ -2.19
Trav3-1Q5R1I8 Gm17161-201ENSMUST00000169187 524 ntBASIC1.38□□□□□ -2.19
Trav3-1Q5R1I8 Vmn1r-ps152-201ENSMUST00000176452 699 ntBASIC1.38□□□□□ -2.19
Trav3-1Q5R1I8 Gm25360-201ENSMUST00000178786 191 ntBASIC1.38□□□□□ -2.19
Trav3-1Q5R1I8 Gm6900-201ENSMUST00000178971 342 ntBASIC1.38□□□□□ -2.19
Trav3-1Q5R1I8 Gm23816-201ENSMUST00000179617 132 ntBASIC1.38□□□□□ -2.19
Trav3-1Q5R1I8 Mir7056-201ENSMUST00000183776 59 ntBASIC1.38□□□□□ -2.19
Trav3-1Q5R1I8 Gm27161-201ENSMUST00000183960 562 ntBASIC1.38□□□□□ -2.19
Trav3-1Q5R1I8 Gm29534-201ENSMUST00000187328 382 ntBASIC1.38□□□□□ -2.19
Trav3-1Q5R1I8 Gm38171-201ENSMUST00000195716 478 ntTSL 3 BASIC1.38□□□□□ -2.19
Trav3-1Q5R1I8 Mir9-1-201ENSMUST00000199907 89 ntBASIC1.38□□□□□ -2.19
Trav3-1Q5R1I8 Gm44084-201ENSMUST00000203947 409 ntBASIC1.38□□□□□ -2.19
Trav3-1Q5R1I8 Olfr1556-ps1-201ENSMUST00000204688 466 ntBASIC1.38□□□□□ -2.19
Trav3-1Q5R1I8 Gm45173-201ENSMUST00000206819 305 ntBASIC1.38□□□□□ -2.19
Trav3-1Q5R1I8 Gm45365-201ENSMUST00000209489 256 ntBASIC1.38□□□□□ -2.19
Trav3-1Q5R1I8 1700061N14Rik-201ENSMUST00000212295 463 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
Trav3-1Q5R1I8 Gm45879-201ENSMUST00000212521 392 ntBASIC1.38□□□□□ -2.19
Trav3-1Q5R1I8 CT010455.1-201ENSMUST00000218579 413 ntBASIC1.38□□□□□ -2.19
Trav3-1Q5R1I8 Gm17890-201ENSMUST00000221419 757 ntBASIC1.38□□□□□ -2.19
Trav3-1Q5R1I8 AC159632.1-201ENSMUST00000221808 317 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
Retrieved 100 of 76,532 protein–RNA pairs in 81.4 ms