Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Gm13677-201ENSMUST00000120739 595 ntBASIC8.41□□□□□ -1.06
Trim41Q5NCC3 Gm24876-201ENSMUST00000158780 92 ntBASIC8.41□□□□□ -1.06
Trim41Q5NCC3 Gm26291-201ENSMUST00000158889 137 ntBASIC8.41□□□□□ -1.06
Trim41Q5NCC3 Gm3370-201ENSMUST00000171785 500 ntBASIC8.41□□□□□ -1.06
Trim41Q5NCC3 Gm28849-201ENSMUST00000188127 174 ntBASIC8.41□□□□□ -1.06
Trim41Q5NCC3 Gm28330-201ENSMUST00000190353 171 ntBASIC8.41□□□□□ -1.06
Trim41Q5NCC3 Gm45052-201ENSMUST00000206457 405 ntTSL 2 BASIC8.41□□□□□ -1.06
Trim41Q5NCC3 Gm46194-201ENSMUST00000218136 320 ntBASIC8.41□□□□□ -1.06
Trim41Q5NCC3 AC126440.1-201ENSMUST00000227098 349 ntBASIC8.41□□□□□ -1.06
Trim41Q5NCC3 Gm22154-201ENSMUST00000083844 131 ntBASIC8.41□□□□□ -1.06
Trim41Q5NCC3 Olfr91-202ENSMUST00000216376 3832 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
Trim41Q5NCC3 Olfr1385-202ENSMUST00000214948 4412 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.06
Trim41Q5NCC3 Gm37628-201ENSMUST00000194644 5440 ntBASIC8.4□□□□□ -1.06
Trim41Q5NCC3 Gm45557-201ENSMUST00000210004 1651 ntBASIC8.4□□□□□ -1.06
Trim41Q5NCC3 AC131586.2-202ENSMUST00000227016 2705 ntBASIC8.4□□□□□ -1.06
Trim41Q5NCC3 Herc2-203ENSMUST00000205303 14403 ntAPPRIS ALT2 TSL 5 BASIC8.4□□□□□ -1.06
Trim41Q5NCC3 4930528J11Rik-201ENSMUST00000201689 3611 ntBASIC8.4□□□□□ -1.06
Trim41Q5NCC3 Nptn-205ENSMUST00000176250 4531 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Trim41Q5NCC3 Rgs17-204ENSMUST00000131996 8107 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Trim41Q5NCC3 Cfap61-207ENSMUST00000138774 3308 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Trim41Q5NCC3 4930444F02Rik-201ENSMUST00000215429 6871 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Trim41Q5NCC3 Cep57l1-201ENSMUST00000019951 2177 ntAPPRIS ALT2 TSL 5 BASIC8.4□□□□□ -1.06
Trim41Q5NCC3 Gm6274-201ENSMUST00000118173 797 ntBASIC8.4□□□□□ -1.06
Trim41Q5NCC3 Gm14067-201ENSMUST00000119340 314 ntBASIC8.4□□□□□ -1.06
Trim41Q5NCC3 Gm13371-201ENSMUST00000137756 469 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Trim41Q5NCC3 Gm24931-201ENSMUST00000158324 107 ntBASIC8.4□□□□□ -1.06
Trim41Q5NCC3 Gm23115-201ENSMUST00000158480 108 ntBASIC8.4□□□□□ -1.06
Trim41Q5NCC3 Gm23179-201ENSMUST00000158693 304 ntBASIC8.4□□□□□ -1.06
Trim41Q5NCC3 Mir7022-201ENSMUST00000183749 61 ntBASIC8.4□□□□□ -1.06
Trim41Q5NCC3 Mir129b-201ENSMUST00000197461 65 ntBASIC8.4□□□□□ -1.06
Trim41Q5NCC3 AC153864.2-201ENSMUST00000220424 292 ntBASIC8.4□□□□□ -1.06
Trim41Q5NCC3 AC122397.2-201ENSMUST00000227422 686 ntBASIC8.4□□□□□ -1.06
Trim41Q5NCC3 Mir181b-2-201ENSMUST00000083644 89 ntBASIC8.4□□□□□ -1.06
Trim41Q5NCC3 Gm24031-201ENSMUST00000083930 131 ntBASIC8.4□□□□□ -1.06
Trim41Q5NCC3 Ptprd-217ENSMUST00000174023 4530 ntTSL 5 BASIC8.4□□□□□ -1.06
Trim41Q5NCC3 Ptprd-203ENSMUST00000098005 4542 ntTSL 5 BASIC8.4□□□□□ -1.06
Trim41Q5NCC3 Gm29325-201ENSMUST00000190705 2528 ntBASIC8.4□□□□□ -1.07
Trim41Q5NCC3 AC192616.2-201ENSMUST00000221482 3841 ntBASIC8.4□□□□□ -1.07
Trim41Q5NCC3 Gm21269-201ENSMUST00000206521 12456 ntTSL 3 BASIC8.39□□□□□ -1.07
Trim41Q5NCC3 Ubtfl1-203ENSMUST00000169398 4430 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Trim41Q5NCC3 Gm30524-201ENSMUST00000204271 2300 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Trim41Q5NCC3 Mir701-201ENSMUST00000102208 109 ntBASIC8.39□□□□□ -1.07
Trim41Q5NCC3 Trav16n-201ENSMUST00000103633 353 ntAPPRIS ALT2 BASIC8.39□□□□□ -1.07
Trim41Q5NCC3 Gm24124-201ENSMUST00000104103 132 ntBASIC8.39□□□□□ -1.07
Trim41Q5NCC3 Gm15012-201ENSMUST00000119176 106 ntBASIC8.39□□□□□ -1.07
Trim41Q5NCC3 Gm23789-201ENSMUST00000122536 301 ntBASIC8.39□□□□□ -1.07
Trim41Q5NCC3 Gm18953-201ENSMUST00000175694 300 ntBASIC8.39□□□□□ -1.07
Trim41Q5NCC3 Mir466b-1-201ENSMUST00000177988 82 ntBASIC8.39□□□□□ -1.07
Trim41Q5NCC3 Gm43583-201ENSMUST00000199235 303 ntBASIC8.39□□□□□ -1.07
Trim41Q5NCC3 4930431L21Rik-202ENSMUST00000200253 624 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Trim41Q5NCC3 AC164437.2-201ENSMUST00000228915 797 ntBASIC8.39□□□□□ -1.07
Trim41Q5NCC3 Gm43834-201ENSMUST00000197097 4830 ntBASIC8.39□□□□□ -1.07
Trim41Q5NCC3 Olfr983-202ENSMUST00000213087 6196 ntAPPRIS P1 TSL 2 BASIC8.39□□□□□ -1.07
Trim41Q5NCC3 Gm45131-201ENSMUST00000208051 2582 ntBASIC8.39□□□□□ -1.07
Trim41Q5NCC3 Olfr1238-203ENSMUST00000217237 5761 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
Trim41Q5NCC3 Olfr1500-201ENSMUST00000067670 2092 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
Trim41Q5NCC3 Fat4-201ENSMUST00000061260 16109 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Trim41Q5NCC3 Olfr542-ps1-202ENSMUST00000218525 4039 ntTSL 5 BASIC8.38□□□□□ -1.07
Trim41Q5NCC3 Pot1a-203ENSMUST00000115330 3151 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Trim41Q5NCC3 2210408I21Rik-201ENSMUST00000168779 5051 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Trim41Q5NCC3 Cbx5-202ENSMUST00000118152 8803 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Trim41Q5NCC3 Gm22497-201ENSMUST00000104499 131 ntBASIC8.38□□□□□ -1.07
Trim41Q5NCC3 Gm14706-201ENSMUST00000117744 255 ntBASIC8.38□□□□□ -1.07
Trim41Q5NCC3 Gm11781-201ENSMUST00000118328 472 ntBASIC8.38□□□□□ -1.07
Trim41Q5NCC3 Gm13541-201ENSMUST00000119519 283 ntBASIC8.38□□□□□ -1.07
Trim41Q5NCC3 Gm14687-201ENSMUST00000120206 363 ntBASIC8.38□□□□□ -1.07
Trim41Q5NCC3 Gm22816-201ENSMUST00000157450 117 ntBASIC8.38□□□□□ -1.07
Trim41Q5NCC3 Gm38832-201ENSMUST00000205674 400 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Trim41Q5NCC3 BC024386-203ENSMUST00000209817 825 ntTSL 5 BASIC8.38□□□□□ -1.07
Trim41Q5NCC3 Gm6842-201ENSMUST00000211361 390 ntBASIC8.38□□□□□ -1.07
Trim41Q5NCC3 CT025689.3-201ENSMUST00000223817 301 ntBASIC8.38□□□□□ -1.07
Trim41Q5NCC3 Macf1-202ENSMUST00000084301 23398 ntAPPRIS ALT2 TSL 5 BASIC8.38□□□□□ -1.07
Trim41Q5NCC3 Olfr893-202ENSMUST00000211975 2924 ntAPPRIS ALT2 TSL 5 BASIC8.38□□□□□ -1.07
Trim41Q5NCC3 Oog1-202ENSMUST00000222112 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
Trim41Q5NCC3 Olfr1250-203ENSMUST00000215730 4632 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
Trim41Q5NCC3 Plcz1-201ENSMUST00000032356 2271 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Trim41Q5NCC3 Adam5-201ENSMUST00000050300 2560 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Trim41Q5NCC3 Olfr870-202ENSMUST00000215984 4091 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
Trim41Q5NCC3 Vmn1r185-203ENSMUST00000227264 5589 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
Trim41Q5NCC3 Abcc9-203ENSMUST00000100827 7306 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
Trim41Q5NCC3 Olfr1217-204ENSMUST00000216592 3992 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
Trim41Q5NCC3 Gm22784-201ENSMUST00000104088 132 ntBASIC8.37□□□□□ -1.07
Trim41Q5NCC3 Gm12711-201ENSMUST00000131249 340 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Trim41Q5NCC3 Gm15350-201ENSMUST00000135138 569 ntTSL 2 BASIC8.37□□□□□ -1.07
Trim41Q5NCC3 Gm25883-201ENSMUST00000157781 271 ntBASIC8.37□□□□□ -1.07
Trim41Q5NCC3 Gm44485-201ENSMUST00000199569 137 ntBASIC8.37□□□□□ -1.07
Trim41Q5NCC3 Gm4036-201ENSMUST00000220842 626 ntBASIC8.37□□□□□ -1.07
Trim41Q5NCC3 Ly6e-ps1-201ENSMUST00000222501 367 ntBASIC8.37□□□□□ -1.07
Trim41Q5NCC3 Pirb-201ENSMUST00000078451 3824 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Trim41Q5NCC3 Fbxw24-201ENSMUST00000073962 1488 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
Trim41Q5NCC3 Olfr430-202ENSMUST00000213425 3873 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
Trim41Q5NCC3 Ahnak-202ENSMUST00000092956 18099 ntAPPRIS P3 TSL 1 (best) BASIC8.37□□□□□ -1.07
Trim41Q5NCC3 Epha7-201ENSMUST00000029964 6746 ntAPPRIS P3 TSL 1 (best) BASIC8.36□□□□□ -1.07
Trim41Q5NCC3 Olfr329-ps-203ENSMUST00000219448 4052 ntAPPRIS P2 TSL 5 BASIC8.36□□□□□ -1.07
Trim41Q5NCC3 Olfr617-203ENSMUST00000216516 3083 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
Trim41Q5NCC3 Fam26d-201ENSMUST00000048052 3711 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Trim41Q5NCC3 Mtm1-213ENSMUST00000171933 3488 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Trim41Q5NCC3 Gm16185-201ENSMUST00000125071 3207 ntTSL 5 BASIC8.36□□□□□ -1.07
Trim41Q5NCC3 Abcb5-201ENSMUST00000035515 3876 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Trim41Q5NCC3 Trav14d-2-201ENSMUST00000103597 276 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms