Protein–RNA interactions for Protein: Q4QRL3

Ccdc88b, Coiled-coil domain-containing protein 88B, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88bQ4QRL3 Vmn1r7-201ENSMUST00000176252 1219 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
Ccdc88bQ4QRL3 Olfr1055-202ENSMUST00000188023 939 ntBASIC3.06□□□□□ -1.92
Ccdc88bQ4QRL3 1700019A02Rik-202ENSMUST00000190748 726 ntAPPRIS ALT2 TSL 3 BASIC3.06□□□□□ -1.92
Ccdc88bQ4QRL3 Olfr1228-201ENSMUST00000190757 1094 ntAPPRIS P2 BASIC3.06□□□□□ -1.92
Ccdc88bQ4QRL3 Gm25796-201ENSMUST00000082645 163 ntBASIC3.06□□□□□ -1.92
Ccdc88bQ4QRL3 Gm19335-201ENSMUST00000195836 2069 ntBASIC3.06□□□□□ -1.92
Ccdc88bQ4QRL3 Gm26301-201ENSMUST00000104813 95 ntBASIC3.05□□□□□ -1.92
Ccdc88bQ4QRL3 Gm11460-201ENSMUST00000118200 361 ntBASIC3.05□□□□□ -1.92
Ccdc88bQ4QRL3 Mir7665-201ENSMUST00000184907 63 ntBASIC3.05□□□□□ -1.92
Ccdc88bQ4QRL3 Gm18727-201ENSMUST00000185981 553 ntBASIC3.05□□□□□ -1.92
Ccdc88bQ4QRL3 Gm38238-201ENSMUST00000194334 346 ntBASIC3.05□□□□□ -1.92
Ccdc88bQ4QRL3 Gm18341-201ENSMUST00000197538 622 ntBASIC3.05□□□□□ -1.92
Ccdc88bQ4QRL3 Olfr509-201ENSMUST00000061690 1075 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
Ccdc88bQ4QRL3 4930522H14Rik-201ENSMUST00000082306 849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
Ccdc88bQ4QRL3 Mir448-201ENSMUST00000083516 112 ntBASIC3.05□□□□□ -1.92
Ccdc88bQ4QRL3 Nectin3-206ENSMUST00000121803 541 ntTSL 2 BASIC3.04□□□□□ -1.92
Ccdc88bQ4QRL3 Gm38018-201ENSMUST00000195651 540 ntBASIC3.04□□□□□ -1.92
Ccdc88bQ4QRL3 Gm18540-201ENSMUST00000204025 526 ntBASIC3.04□□□□□ -1.92
Ccdc88bQ4QRL3 D730003K21Rik-201ENSMUST00000215052 589 ntTSL 2 BASIC3.04□□□□□ -1.92
Ccdc88bQ4QRL3 Gm15611-201ENSMUST00000146928 406 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
Ccdc88bQ4QRL3 Gm26354-201ENSMUST00000158221 129 ntBASIC3.03□□□□□ -1.92
Ccdc88bQ4QRL3 Mup-ps9-201ENSMUST00000178847 545 ntBASIC3.03□□□□□ -1.92
Ccdc88bQ4QRL3 Vmn1r69-201ENSMUST00000163658 2558 ntAPPRIS P2 BASIC3.03□□□□□ -1.92
Ccdc88bQ4QRL3 Gm44133-202ENSMUST00000204450 2586 ntBASIC3.03□□□□□ -1.92
Ccdc88bQ4QRL3 Gm44897-201ENSMUST00000206187 1341 ntBASIC3.03□□□□□ -1.92
Ccdc88bQ4QRL3 Hnmt-202ENSMUST00000114497 994 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.93
Ccdc88bQ4QRL3 Olfr1171-ps1-201ENSMUST00000118079 837 ntBASIC3.03□□□□□ -1.93
Ccdc88bQ4QRL3 Gm22316-201ENSMUST00000158012 216 ntBASIC3.03□□□□□ -1.93
Ccdc88bQ4QRL3 Gm37037-201ENSMUST00000194475 424 ntBASIC3.03□□□□□ -1.93
Ccdc88bQ4QRL3 Igkv13-76-201ENSMUST00000197621 347 ntBASIC3.03□□□□□ -1.93
Ccdc88bQ4QRL3 Gm43464-201ENSMUST00000198003 317 ntTSL 3 BASIC3.03□□□□□ -1.93
Ccdc88bQ4QRL3 Gm6012-201ENSMUST00000210821 730 ntBASIC3.03□□□□□ -1.93
Ccdc88bQ4QRL3 AC122393.1-201ENSMUST00000226570 319 ntBASIC3.03□□□□□ -1.93
Ccdc88bQ4QRL3 AC192088.2-201ENSMUST00000227590 411 ntBASIC3.03□□□□□ -1.93
Ccdc88bQ4QRL3 Tas2r114-201ENSMUST00000080619 930 ntAPPRIS P1 BASIC3.03□□□□□ -1.93
Ccdc88bQ4QRL3 Olfr1318-202ENSMUST00000214063 3556 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
Ccdc88bQ4QRL3 N4bp2l2-201ENSMUST00000118316 8982 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
Ccdc88bQ4QRL3 Gm22761-201ENSMUST00000102278 96 ntBASIC3.02□□□□□ -1.93
Ccdc88bQ4QRL3 Cypt15-201ENSMUST00000115114 519 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
Ccdc88bQ4QRL3 Gm13913-201ENSMUST00000121126 260 ntBASIC3.02□□□□□ -1.93
Ccdc88bQ4QRL3 Gm28200-201ENSMUST00000187778 315 ntBASIC3.02□□□□□ -1.93
Ccdc88bQ4QRL3 Gm29378-201ENSMUST00000188723 315 ntBASIC3.02□□□□□ -1.93
Ccdc88bQ4QRL3 Gm28909-201ENSMUST00000189406 315 ntBASIC3.02□□□□□ -1.93
Ccdc88bQ4QRL3 CR974485.1-201ENSMUST00000222408 402 ntBASIC3.02□□□□□ -1.93
Ccdc88bQ4QRL3 AC113031.4-201ENSMUST00000228381 514 ntBASIC3.02□□□□□ -1.93
Ccdc88bQ4QRL3 Olfr191-201ENSMUST00000078517 930 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
Ccdc88bQ4QRL3 AW554918-203ENSMUST00000100131 1684 ntTSL 5 BASIC3.01□□□□□ -1.93
Ccdc88bQ4QRL3 Omd-201ENSMUST00000065494 1556 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
Ccdc88bQ4QRL3 Gm22003-201ENSMUST00000101885 107 ntBASIC3.01□□□□□ -1.93
Ccdc88bQ4QRL3 Gm14292-201ENSMUST00000118761 456 ntBASIC3.01□□□□□ -1.93
Ccdc88bQ4QRL3 Gm25831-201ENSMUST00000158924 163 ntBASIC3.01□□□□□ -1.93
Ccdc88bQ4QRL3 Gm24540-201ENSMUST00000177627 107 ntBASIC3.01□□□□□ -1.93
Ccdc88bQ4QRL3 Gm25256-201ENSMUST00000177746 107 ntBASIC3.01□□□□□ -1.93
Ccdc88bQ4QRL3 Gm22822-201ENSMUST00000177941 107 ntBASIC3.01□□□□□ -1.93
Ccdc88bQ4QRL3 Rnu6-201ENSMUST00000178023 107 ntBASIC3.01□□□□□ -1.93
Ccdc88bQ4QRL3 Gm24753-201ENSMUST00000178183 107 ntBASIC3.01□□□□□ -1.93
Ccdc88bQ4QRL3 Gm25829-201ENSMUST00000178275 107 ntBASIC3.01□□□□□ -1.93
Ccdc88bQ4QRL3 Gm22092-201ENSMUST00000178290 107 ntBASIC3.01□□□□□ -1.93
Ccdc88bQ4QRL3 Gm24486-201ENSMUST00000178420 107 ntBASIC3.01□□□□□ -1.93
Ccdc88bQ4QRL3 Gm23217-201ENSMUST00000178482 107 ntBASIC3.01□□□□□ -1.93
Ccdc88bQ4QRL3 Gm26465-201ENSMUST00000178517 107 ntBASIC3.01□□□□□ -1.93
Ccdc88bQ4QRL3 Gm23092-201ENSMUST00000178688 107 ntBASIC3.01□□□□□ -1.93
Ccdc88bQ4QRL3 Gm23269-201ENSMUST00000178701 107 ntBASIC3.01□□□□□ -1.93
Ccdc88bQ4QRL3 Gm25709-201ENSMUST00000178844 107 ntBASIC3.01□□□□□ -1.93
Ccdc88bQ4QRL3 Gm25547-201ENSMUST00000178877 107 ntBASIC3.01□□□□□ -1.93
Ccdc88bQ4QRL3 Gm24722-201ENSMUST00000179017 107 ntBASIC3.01□□□□□ -1.93
Ccdc88bQ4QRL3 Gm22969-201ENSMUST00000179018 107 ntBASIC3.01□□□□□ -1.93
Ccdc88bQ4QRL3 Gm22129-201ENSMUST00000179034 107 ntBASIC3.01□□□□□ -1.93
Ccdc88bQ4QRL3 Gm24873-201ENSMUST00000179101 107 ntBASIC3.01□□□□□ -1.93
Ccdc88bQ4QRL3 Gm23934-201ENSMUST00000179111 107 ntBASIC3.01□□□□□ -1.93
Ccdc88bQ4QRL3 Gm25021-201ENSMUST00000179184 107 ntBASIC3.01□□□□□ -1.93
Ccdc88bQ4QRL3 Gm22623-201ENSMUST00000179244 107 ntBASIC3.01□□□□□ -1.93
Ccdc88bQ4QRL3 Gm25737-201ENSMUST00000179274 107 ntBASIC3.01□□□□□ -1.93
Ccdc88bQ4QRL3 Gm22618-201ENSMUST00000179376 107 ntBASIC3.01□□□□□ -1.93
Ccdc88bQ4QRL3 Gm24182-201ENSMUST00000179419 107 ntBASIC3.01□□□□□ -1.93
Ccdc88bQ4QRL3 Gm24242-201ENSMUST00000179440 107 ntBASIC3.01□□□□□ -1.93
Ccdc88bQ4QRL3 Gm25064-201ENSMUST00000179535 107 ntBASIC3.01□□□□□ -1.93
Ccdc88bQ4QRL3 Gm26295-201ENSMUST00000179690 107 ntBASIC3.01□□□□□ -1.93
Ccdc88bQ4QRL3 Gm24424-201ENSMUST00000179714 107 ntBASIC3.01□□□□□ -1.93
Ccdc88bQ4QRL3 Gm22823-201ENSMUST00000179754 107 ntBASIC3.01□□□□□ -1.93
Ccdc88bQ4QRL3 Gm22360-201ENSMUST00000179775 107 ntBASIC3.01□□□□□ -1.93
Ccdc88bQ4QRL3 Gm24978-201ENSMUST00000179782 107 ntBASIC3.01□□□□□ -1.93
Ccdc88bQ4QRL3 Gm24967-201ENSMUST00000179791 107 ntBASIC3.01□□□□□ -1.93
Ccdc88bQ4QRL3 Gm24968-201ENSMUST00000179817 107 ntBASIC3.01□□□□□ -1.93
Ccdc88bQ4QRL3 Gm24267-201ENSMUST00000179841 107 ntBASIC3.01□□□□□ -1.93
Ccdc88bQ4QRL3 Gm22288-201ENSMUST00000179904 107 ntBASIC3.01□□□□□ -1.93
Ccdc88bQ4QRL3 Gm24389-201ENSMUST00000179962 107 ntBASIC3.01□□□□□ -1.93
Ccdc88bQ4QRL3 Gm23410-201ENSMUST00000179967 107 ntBASIC3.01□□□□□ -1.93
Ccdc88bQ4QRL3 Gm22307-201ENSMUST00000180019 107 ntBASIC3.01□□□□□ -1.93
Ccdc88bQ4QRL3 Gm22756-201ENSMUST00000180118 107 ntBASIC3.01□□□□□ -1.93
Ccdc88bQ4QRL3 Gm23512-201ENSMUST00000180237 107 ntBASIC3.01□□□□□ -1.93
Ccdc88bQ4QRL3 Gm25412-201ENSMUST00000180258 107 ntBASIC3.01□□□□□ -1.93
Ccdc88bQ4QRL3 Gm26058-201ENSMUST00000180294 107 ntBASIC3.01□□□□□ -1.93
Ccdc88bQ4QRL3 Gm29163-201ENSMUST00000188029 107 ntBASIC3.01□□□□□ -1.93
Ccdc88bQ4QRL3 Gm43513-201ENSMUST00000199779 1076 ntBASIC3.01□□□□□ -1.93
Ccdc88bQ4QRL3 Gm19457-201ENSMUST00000200995 448 ntBASIC3.01□□□□□ -1.93
Ccdc88bQ4QRL3 AC157570.3-201ENSMUST00000219281 205 ntBASIC3.01□□□□□ -1.93
Ccdc88bQ4QRL3 AC099612.2-201ENSMUST00000226824 721 ntBASIC3.01□□□□□ -1.93
Ccdc88bQ4QRL3 Vmn1r72-201ENSMUST00000053134 921 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
Ccdc88bQ4QRL3 Gm22246-201ENSMUST00000082478 107 ntBASIC3.01□□□□□ -1.93
Retrieved 100 of 76,532 protein–RNA pairs in 77.2 ms