Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Fam81b-201ENSMUST00000208418 2760 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
Trim40Q3UWA4 Olfr352-202ENSMUST00000217325 3337 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
Trim40Q3UWA4 Gm24125-201ENSMUST00000104105 137 ntBASIC2.99□□□□□ -1.93
Trim40Q3UWA4 Gm14971-201ENSMUST00000117980 663 ntBASIC2.99□□□□□ -1.93
Trim40Q3UWA4 Gm12902-201ENSMUST00000118389 322 ntBASIC2.99□□□□□ -1.93
Trim40Q3UWA4 Olfr1186-201ENSMUST00000121619 1090 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
Trim40Q3UWA4 Gm23887-201ENSMUST00000122683 172 ntBASIC2.99□□□□□ -1.93
Trim40Q3UWA4 Gm23886-201ENSMUST00000122684 313 ntBASIC2.99□□□□□ -1.93
Trim40Q3UWA4 Klra17-201ENSMUST00000014687 1190 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
Trim40Q3UWA4 Gm22236-201ENSMUST00000157093 106 ntBASIC2.99□□□□□ -1.93
Trim40Q3UWA4 Gm23538-201ENSMUST00000157535 101 ntBASIC2.99□□□□□ -1.93
Trim40Q3UWA4 Gm26393-201ENSMUST00000157625 129 ntBASIC2.99□□□□□ -1.93
Trim40Q3UWA4 Gm24961-201ENSMUST00000157918 184 ntBASIC2.99□□□□□ -1.93
Trim40Q3UWA4 Ear-ps10-201ENSMUST00000161871 460 ntBASIC2.99□□□□□ -1.93
Trim40Q3UWA4 4930505G20Rik-201ENSMUST00000176582 561 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
Trim40Q3UWA4 Gm22584-201ENSMUST00000177935 92 ntBASIC2.99□□□□□ -1.93
Trim40Q3UWA4 Gm27834-201ENSMUST00000183427 125 ntBASIC2.99□□□□□ -1.93
Trim40Q3UWA4 Mir6986-201ENSMUST00000184483 58 ntBASIC2.99□□□□□ -1.93
Trim40Q3UWA4 Gm37641-201ENSMUST00000193837 239 ntBASIC2.99□□□□□ -1.93
Trim40Q3UWA4 Gm37062-201ENSMUST00000195028 701 ntTSL 5 BASIC2.99□□□□□ -1.93
Trim40Q3UWA4 Gm29704-201ENSMUST00000196011 253 ntBASIC2.99□□□□□ -1.93
Trim40Q3UWA4 Gm43652-201ENSMUST00000196219 675 ntBASIC2.99□□□□□ -1.93
Trim40Q3UWA4 Gm36831-201ENSMUST00000196485 631 ntTSL 2 BASIC2.99□□□□□ -1.93
Trim40Q3UWA4 Gm19457-201ENSMUST00000200995 448 ntBASIC2.99□□□□□ -1.93
Trim40Q3UWA4 Gm43026-201ENSMUST00000202972 325 ntBASIC2.99□□□□□ -1.93
Trim40Q3UWA4 4930558N11Rik-204ENSMUST00000211512 516 ntTSL 3 BASIC2.99□□□□□ -1.93
Trim40Q3UWA4 AC162931.1-201ENSMUST00000214184 267 ntBASIC2.99□□□□□ -1.93
Trim40Q3UWA4 Gm9068-201ENSMUST00000217393 455 ntBASIC2.99□□□□□ -1.93
Trim40Q3UWA4 Gm46233-201ENSMUST00000217831 449 ntBASIC2.99□□□□□ -1.93
Trim40Q3UWA4 AC153506.2-201ENSMUST00000218051 257 ntBASIC2.99□□□□□ -1.93
Trim40Q3UWA4 AC132384.5-201ENSMUST00000218562 226 ntBASIC2.99□□□□□ -1.93
Trim40Q3UWA4 AC130823.2-201ENSMUST00000226169 290 ntBASIC2.99□□□□□ -1.93
Trim40Q3UWA4 Vmn1r31-204ENSMUST00000226390 912 ntAPPRIS P2 BASIC2.99□□□□□ -1.93
Trim40Q3UWA4 Gngt1-201ENSMUST00000031673 1183 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
Trim40Q3UWA4 Tas2r118-201ENSMUST00000062463 900 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
Trim40Q3UWA4 Olfr295-201ENSMUST00000078447 930 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
Trim40Q3UWA4 Olfr1193-201ENSMUST00000081697 957 ntBASIC2.99□□□□□ -1.93
Trim40Q3UWA4 Olfr1048-201ENSMUST00000099900 963 ntAPPRIS P2 BASIC2.99□□□□□ -1.93
Trim40Q3UWA4 Gm43715-201ENSMUST00000196307 2715 ntBASIC2.99□□□□□ -1.93
Trim40Q3UWA4 Gm3563-201ENSMUST00000172963 1628 ntBASIC2.99□□□□□ -1.93
Trim40Q3UWA4 Olfr855-202ENSMUST00000215587 1797 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
Trim40Q3UWA4 Gm43230-201ENSMUST00000200980 2129 ntBASIC2.99□□□□□ -1.93
Trim40Q3UWA4 Gm43875-201ENSMUST00000203319 2475 ntBASIC2.99□□□□□ -1.93
Trim40Q3UWA4 Vmn1r172-202ENSMUST00000173101 9109 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
Trim40Q3UWA4 Vmn2r42-205ENSMUST00000146278 3086 ntAPPRIS ALT2 TSL 5 BASIC2.99□□□□□ -1.93
Trim40Q3UWA4 Gm28359-201ENSMUST00000187470 1322 ntBASIC2.98□□□□□ -1.93
Trim40Q3UWA4 Olfr355-202ENSMUST00000213574 3610 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
Trim40Q3UWA4 Olfr379-ps1-201ENSMUST00000117349 934 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
Trim40Q3UWA4 Gm14359-201ENSMUST00000118883 424 ntBASIC2.98□□□□□ -1.93
Trim40Q3UWA4 Gm11891-201ENSMUST00000121241 619 ntBASIC2.98□□□□□ -1.93
Trim40Q3UWA4 Gm14581-201ENSMUST00000121726 198 ntBASIC2.98□□□□□ -1.93
Trim40Q3UWA4 Gm12729-201ENSMUST00000130088 624 ntTSL 3 BASIC2.98□□□□□ -1.93
Trim40Q3UWA4 Gm9498-201ENSMUST00000140849 291 ntBASIC2.98□□□□□ -1.93
Trim40Q3UWA4 Gm23602-201ENSMUST00000157258 132 ntBASIC2.98□□□□□ -1.93
Trim40Q3UWA4 Gm27592-201ENSMUST00000157729 126 ntBASIC2.98□□□□□ -1.93
Trim40Q3UWA4 Gm24213-201ENSMUST00000158255 258 ntBASIC2.98□□□□□ -1.93
Trim40Q3UWA4 Gm23352-201ENSMUST00000158428 64 ntBASIC2.98□□□□□ -1.93
Trim40Q3UWA4 Vmn2r-ps111-201ENSMUST00000161565 241 ntTSL 2 BASIC2.98□□□□□ -1.93
Trim40Q3UWA4 Gm22174-201ENSMUST00000175050 125 ntBASIC2.98□□□□□ -1.93
Trim40Q3UWA4 Gm22692-201ENSMUST00000175055 125 ntBASIC2.98□□□□□ -1.93
Trim40Q3UWA4 Gm27634-201ENSMUST00000175060 126 ntBASIC2.98□□□□□ -1.93
Trim40Q3UWA4 Gm22460-201ENSMUST00000175269 124 ntBASIC2.98□□□□□ -1.93
Trim40Q3UWA4 Gm25535-201ENSMUST00000175364 125 ntBASIC2.98□□□□□ -1.93
Trim40Q3UWA4 Gm24365-201ENSMUST00000175384 125 ntBASIC2.98□□□□□ -1.93
Trim40Q3UWA4 Gm44310-201ENSMUST00000175424 126 ntBASIC2.98□□□□□ -1.93
Trim40Q3UWA4 Gm22639-201ENSMUST00000175591 125 ntBASIC2.98□□□□□ -1.93
Trim40Q3UWA4 Gm22910-201ENSMUST00000178568 132 ntBASIC2.98□□□□□ -1.93
Trim40Q3UWA4 Gm24979-201ENSMUST00000178626 126 ntBASIC2.98□□□□□ -1.93
Trim40Q3UWA4 Gm27743-201ENSMUST00000185136 126 ntBASIC2.98□□□□□ -1.93
Trim40Q3UWA4 Gm28534-201ENSMUST00000187744 676 ntBASIC2.98□□□□□ -1.93
Trim40Q3UWA4 Gm29641-201ENSMUST00000188955 259 ntBASIC2.98□□□□□ -1.93
Trim40Q3UWA4 Tardbp-223ENSMUST00000189048 1096 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
Trim40Q3UWA4 Igkv2-105-201ENSMUST00000196931 377 ntBASIC2.98□□□□□ -1.93
Trim40Q3UWA4 Gm42621-201ENSMUST00000198114 275 ntBASIC2.98□□□□□ -1.93
Trim40Q3UWA4 Igkv20-101-2-201ENSMUST00000200406 339 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
Trim40Q3UWA4 Gm18414-201ENSMUST00000210858 694 ntBASIC2.98□□□□□ -1.93
Trim40Q3UWA4 Gm45588-201ENSMUST00000211213 630 ntBASIC2.98□□□□□ -1.93
Trim40Q3UWA4 2210414F02Rik-201ENSMUST00000215316 396 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
Trim40Q3UWA4 AC126673.2-201ENSMUST00000221052 686 ntBASIC2.98□□□□□ -1.93
Trim40Q3UWA4 AC115291.2-201ENSMUST00000228335 437 ntBASIC2.98□□□□□ -1.93
Trim40Q3UWA4 Olfr178-201ENSMUST00000058564 960 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
Trim40Q3UWA4 Tas2r131-201ENSMUST00000082085 1036 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
Trim40Q3UWA4 Gm22507-201ENSMUST00000082773 160 ntBASIC2.98□□□□□ -1.93
Trim40Q3UWA4 Rps15a-ps2-201ENSMUST00000087473 393 ntBASIC2.98□□□□□ -1.93
Trim40Q3UWA4 Vmn2r78-201ENSMUST00000170835 2611 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
Trim40Q3UWA4 AC122850.1-201ENSMUST00000220380 5690 ntBASIC2.98□□□□□ -1.93
Trim40Q3UWA4 Zfp62-212ENSMUST00000180016 3964 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
Trim40Q3UWA4 Vmn1r46-206ENSMUST00000228401 10955 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
Trim40Q3UWA4 Cp-202ENSMUST00000091309 4029 ntAPPRIS P3 TSL 1 (best) BASIC2.97□□□□□ -1.93
Trim40Q3UWA4 Gm15902-202ENSMUST00000219623 3477 ntBASIC2.97□□□□□ -1.93
Trim40Q3UWA4 Gm25088-201ENSMUST00000101803 79 ntBASIC2.97□□□□□ -1.93
Trim40Q3UWA4 Traj24-201ENSMUST00000103717 63 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
Trim40Q3UWA4 Gm25728-201ENSMUST00000104525 159 ntBASIC2.97□□□□□ -1.93
Trim40Q3UWA4 Gm5483-201ENSMUST00000114858 414 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
Trim40Q3UWA4 Gm11352-201ENSMUST00000119264 517 ntBASIC2.97□□□□□ -1.93
Trim40Q3UWA4 Gm12755-201ENSMUST00000122297 282 ntBASIC2.97□□□□□ -1.93
Trim40Q3UWA4 Gm25052-201ENSMUST00000122661 158 ntBASIC2.97□□□□□ -1.93
Trim40Q3UWA4 5330434G04Rik-201ENSMUST00000130264 511 ntTSL 3 BASIC2.97□□□□□ -1.93
Trim40Q3UWA4 4933406D12Rik-201ENSMUST00000147212 737 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
Trim40Q3UWA4 Gm25860-201ENSMUST00000158252 126 ntBASIC2.97□□□□□ -1.93
Retrieved 100 of 76,532 protein–RNA pairs in 84.5 ms