Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Trbv22-201ENSMUST00000191697 291 ntBASIC3.34□□□□□ -1.87
Brf2Q3UAW9 Gm32340-201ENSMUST00000192883 259 ntBASIC3.34□□□□□ -1.87
Brf2Q3UAW9 Ighv1-40-201ENSMUST00000194231 345 ntBASIC3.34□□□□□ -1.87
Brf2Q3UAW9 Gm44923-201ENSMUST00000206673 85 ntBASIC3.34□□□□□ -1.87
Brf2Q3UAW9 Gm44657-201ENSMUST00000208568 450 ntBASIC3.34□□□□□ -1.87
Brf2Q3UAW9 AC120394.1-201ENSMUST00000217153 351 ntBASIC3.34□□□□□ -1.87
Brf2Q3UAW9 AC139376.1-201ENSMUST00000220056 1250 ntBASIC3.34□□□□□ -1.87
Brf2Q3UAW9 AC149586.1-201ENSMUST00000222647 645 ntTSL 3 BASIC3.34□□□□□ -1.87
Brf2Q3UAW9 AC161572.1-201ENSMUST00000227486 640 ntBASIC3.34□□□□□ -1.87
Brf2Q3UAW9 Olfr308-201ENSMUST00000044256 1056 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Brf2Q3UAW9 Gm25586-201ENSMUST00000082499 112 ntBASIC3.34□□□□□ -1.87
Brf2Q3UAW9 Gm5670-201ENSMUST00000093546 372 ntBASIC3.34□□□□□ -1.87
Brf2Q3UAW9 Gm11782-201ENSMUST00000131675 2804 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Brf2Q3UAW9 Gm43883-201ENSMUST00000204002 3750 ntBASIC3.34□□□□□ -1.88
Brf2Q3UAW9 Olfr1079-203ENSMUST00000216480 2071 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.88
Brf2Q3UAW9 Gm38031-201ENSMUST00000191819 3015 ntBASIC3.33□□□□□ -1.88
Brf2Q3UAW9 Nlrp9a-201ENSMUST00000071780 3125 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
Brf2Q3UAW9 Nae1-201ENSMUST00000034349 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Brf2Q3UAW9 Vmn2r75-201ENSMUST00000167830 2562 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Brf2Q3UAW9 Gm11009-201ENSMUST00000108961 417 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Brf2Q3UAW9 Tpt1-ps1-201ENSMUST00000120257 436 ntBASIC3.33□□□□□ -1.88
Brf2Q3UAW9 Gm13602-201ENSMUST00000122405 493 ntBASIC3.33□□□□□ -1.88
Brf2Q3UAW9 Gm13667-201ENSMUST00000132332 617 ntTSL 5 BASIC3.33□□□□□ -1.88
Brf2Q3UAW9 Gm25391-201ENSMUST00000157342 134 ntBASIC3.33□□□□□ -1.88
Brf2Q3UAW9 Gm22597-201ENSMUST00000157602 80 ntBASIC3.33□□□□□ -1.88
Brf2Q3UAW9 9330182O14Rik-201ENSMUST00000179120 423 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Brf2Q3UAW9 Gm26871-205ENSMUST00000181926 742 ntTSL 3 BASIC3.33□□□□□ -1.88
Brf2Q3UAW9 Gm18185-201ENSMUST00000186725 667 ntBASIC3.33□□□□□ -1.88
Brf2Q3UAW9 Gm28597-201ENSMUST00000187664 666 ntBASIC3.33□□□□□ -1.88
Brf2Q3UAW9 Gm28650-201ENSMUST00000188413 411 ntBASIC3.33□□□□□ -1.88
Brf2Q3UAW9 4921527H02Rik-201ENSMUST00000196028 246 ntBASIC3.33□□□□□ -1.88
Brf2Q3UAW9 Gm18982-201ENSMUST00000198118 529 ntBASIC3.33□□□□□ -1.88
Brf2Q3UAW9 Gm31752-201ENSMUST00000199456 856 ntTSL 2 BASIC3.33□□□□□ -1.88
Brf2Q3UAW9 Gm44049-201ENSMUST00000204905 2984 ntBASIC3.33□□□□□ -1.88
Brf2Q3UAW9 4930558N11Rik-204ENSMUST00000211512 516 ntTSL 3 BASIC3.33□□□□□ -1.88
Brf2Q3UAW9 AC161054.1-201ENSMUST00000214319 184 ntBASIC3.33□□□□□ -1.88
Brf2Q3UAW9 AL935138.1-201ENSMUST00000215309 196 ntBASIC3.33□□□□□ -1.88
Brf2Q3UAW9 Gm33680-201ENSMUST00000219336 576 ntTSL 5 BASIC3.33□□□□□ -1.88
Brf2Q3UAW9 Vmn2r-ps99-201ENSMUST00000221276 1203 ntTSL 5 BASIC3.33□□□□□ -1.88
Brf2Q3UAW9 AC124569.4-201ENSMUST00000223830 1220 ntBASIC3.33□□□□□ -1.88
Brf2Q3UAW9 AC124562.1-201ENSMUST00000224673 337 ntBASIC3.33□□□□□ -1.88
Brf2Q3UAW9 AC139845.2-201ENSMUST00000227504 436 ntBASIC3.33□□□□□ -1.88
Brf2Q3UAW9 Olfr1459-201ENSMUST00000078299 1102 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Brf2Q3UAW9 Clec4a4-201ENSMUST00000079379 776 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Brf2Q3UAW9 4930512M02Rik-201ENSMUST00000081896 715 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Brf2Q3UAW9 Gm22970-201ENSMUST00000083304 186 ntBASIC3.33□□□□□ -1.88
Brf2Q3UAW9 Gm10665-201ENSMUST00000098720 966 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Brf2Q3UAW9 Gm10670-201ENSMUST00000098744 966 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Brf2Q3UAW9 Olfr735-202ENSMUST00000216634 3860 ntAPPRIS ALT2 TSL 3 BASIC3.33□□□□□ -1.88
Brf2Q3UAW9 Olfr609-203ENSMUST00000216360 3295 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Brf2Q3UAW9 Olfr352-202ENSMUST00000217325 3337 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Brf2Q3UAW9 Gm28360-201ENSMUST00000187455 1491 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Brf2Q3UAW9 Gm45352-201ENSMUST00000210140 1452 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Brf2Q3UAW9 Olfr681-205ENSMUST00000216247 4729 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Brf2Q3UAW9 Olfr665-204ENSMUST00000216971 3248 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Brf2Q3UAW9 Olfr785-201ENSMUST00000204402 2014 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Brf2Q3UAW9 Mga-202ENSMUST00000079934 13304 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
Brf2Q3UAW9 Vmn1r206-202ENSMUST00000227244 3970 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Brf2Q3UAW9 Gm37788-201ENSMUST00000193958 2705 ntBASIC3.32□□□□□ -1.88
Brf2Q3UAW9 Gm15902-202ENSMUST00000219623 3477 ntBASIC3.32□□□□□ -1.88
Brf2Q3UAW9 Gm45540-201ENSMUST00000209271 3606 ntBASIC3.32□□□□□ -1.88
Brf2Q3UAW9 Rpl10-ps4-201ENSMUST00000117120 286 ntBASIC3.32□□□□□ -1.88
Brf2Q3UAW9 Gm15268-201ENSMUST00000118845 352 ntBASIC3.32□□□□□ -1.88
Brf2Q3UAW9 Gm11785-201ENSMUST00000120165 601 ntBASIC3.32□□□□□ -1.88
Brf2Q3UAW9 Gm14411-201ENSMUST00000121798 914 ntBASIC3.32□□□□□ -1.88
Brf2Q3UAW9 Gm25807-201ENSMUST00000122783 305 ntBASIC3.32□□□□□ -1.88
Brf2Q3UAW9 Gm13431-201ENSMUST00000122948 476 ntTSL 2 BASIC3.32□□□□□ -1.88
Brf2Q3UAW9 Gm11337-201ENSMUST00000144770 335 ntTSL 2 BASIC3.32□□□□□ -1.88
Brf2Q3UAW9 Gm17521-201ENSMUST00000165345 468 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Brf2Q3UAW9 Ighv1-77-201ENSMUST00000170551 294 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Brf2Q3UAW9 Gm24315-201ENSMUST00000177835 127 ntBASIC3.32□□□□□ -1.88
Brf2Q3UAW9 Gm10715-202ENSMUST00000177969 681 ntAPPRIS P5 TSL 5 BASIC3.32□□□□□ -1.88
Brf2Q3UAW9 Gm23379-201ENSMUST00000180026 107 ntBASIC3.32□□□□□ -1.88
Brf2Q3UAW9 Olfr625-ps1-202ENSMUST00000190218 927 ntAPPRIS ALT2 BASIC3.32□□□□□ -1.88
Brf2Q3UAW9 Gm18775-201ENSMUST00000190763 586 ntBASIC3.32□□□□□ -1.88
Brf2Q3UAW9 Gm18296-201ENSMUST00000192475 783 ntBASIC3.32□□□□□ -1.88
Brf2Q3UAW9 2210017I01Rik-201ENSMUST00000195278 822 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Brf2Q3UAW9 Igkv13-74-1-201ENSMUST00000200611 242 ntBASIC3.32□□□□□ -1.88
Brf2Q3UAW9 Gm43415-201ENSMUST00000201934 750 ntBASIC3.32□□□□□ -1.88
Brf2Q3UAW9 Gm44181-201ENSMUST00000203106 483 ntBASIC3.32□□□□□ -1.88
Brf2Q3UAW9 Gm30146-201ENSMUST00000206564 605 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Brf2Q3UAW9 Gm2676-201ENSMUST00000207279 606 ntBASIC3.32□□□□□ -1.88
Brf2Q3UAW9 Gm44961-201ENSMUST00000207450 196 ntBASIC3.32□□□□□ -1.88
Brf2Q3UAW9 5330439M10Rik-201ENSMUST00000218667 348 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Brf2Q3UAW9 AC153979.1-201ENSMUST00000219684 242 ntTSL 5 BASIC3.32□□□□□ -1.88
Brf2Q3UAW9 AC140254.1-201ENSMUST00000220063 331 ntBASIC3.32□□□□□ -1.88
Brf2Q3UAW9 AC156790.5-201ENSMUST00000227075 231 ntBASIC3.32□□□□□ -1.88
Brf2Q3UAW9 AC113031.5-201ENSMUST00000227116 606 ntBASIC3.32□□□□□ -1.88
Brf2Q3UAW9 AC157572.3-201ENSMUST00000227288 303 ntBASIC3.32□□□□□ -1.88
Brf2Q3UAW9 Gm22229-201ENSMUST00000082987 108 ntBASIC3.32□□□□□ -1.88
Brf2Q3UAW9 Gm23741-201ENSMUST00000097237 171 ntBASIC3.32□□□□□ -1.88
Brf2Q3UAW9 Gm28359-201ENSMUST00000187470 1322 ntBASIC3.32□□□□□ -1.88
Brf2Q3UAW9 Npy6r-201ENSMUST00000042747 2567 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Brf2Q3UAW9 Olfr1130-202ENSMUST00000216580 2648 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Brf2Q3UAW9 Olfr577-202ENSMUST00000214080 3282 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Brf2Q3UAW9 Gm45389-201ENSMUST00000211163 3399 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Brf2Q3UAW9 Zfp493-201ENSMUST00000164936 3258 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Brf2Q3UAW9 Olfr513-202ENSMUST00000214670 2029 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Brf2Q3UAW9 Mier1-201ENSMUST00000030247 4703 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
Brf2Q3UAW9 Trbv21-201ENSMUST00000103278 290 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 136.2 ms