Protein–RNA interactions for Protein: Q3TIX9

Usp39, U4/U6.U5 tri-snRNP-associated protein 2, mousemouse

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp39Q3TIX9 Zfp595-203ENSMUST00000168892 4040 ntAPPRIS P2 TSL 1 (best) BASIC4.04□□□□□ -1.76
Usp39Q3TIX9 Acsm3-202ENSMUST00000106526 2704 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Usp39Q3TIX9 Aspn-202ENSMUST00000177948 2329 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Usp39Q3TIX9 Mannr-201ENSMUST00000193549 1438 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Usp39Q3TIX9 Gm38010-201ENSMUST00000192592 2784 ntBASIC4.03□□□□□ -1.76
Usp39Q3TIX9 Vmn2r30-202ENSMUST00000174368 3688 ntTSL 2 BASIC4.03□□□□□ -1.76
Usp39Q3TIX9 CT030170.3-201ENSMUST00000221205 1815 ntBASIC4.03□□□□□ -1.76
Usp39Q3TIX9 AC153964.1-201ENSMUST00000219677 3142 ntBASIC4.03□□□□□ -1.76
Usp39Q3TIX9 Olfr905-202ENSMUST00000214377 4429 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Usp39Q3TIX9 Gm23322-201ENSMUST00000104464 167 ntBASIC4.03□□□□□ -1.76
Usp39Q3TIX9 Gm23226-201ENSMUST00000116927 103 ntBASIC4.03□□□□□ -1.76
Usp39Q3TIX9 Gm5757-201ENSMUST00000117494 528 ntBASIC4.03□□□□□ -1.76
Usp39Q3TIX9 Vmn1r-ps125-201ENSMUST00000117767 290 ntBASIC4.03□□□□□ -1.76
Usp39Q3TIX9 Gm11936-201ENSMUST00000118323 160 ntBASIC4.03□□□□□ -1.76
Usp39Q3TIX9 Gm14591-201ENSMUST00000120407 518 ntBASIC4.03□□□□□ -1.76
Usp39Q3TIX9 Gm5379-201ENSMUST00000120973 826 ntBASIC4.03□□□□□ -1.76
Usp39Q3TIX9 Gm23213-201ENSMUST00000122715 313 ntBASIC4.03□□□□□ -1.76
Usp39Q3TIX9 Gm10444-201ENSMUST00000126708 148 ntBASIC4.03□□□□□ -1.76
Usp39Q3TIX9 Gm15327-202ENSMUST00000153958 467 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Usp39Q3TIX9 Gm26187-201ENSMUST00000157693 101 ntBASIC4.03□□□□□ -1.76
Usp39Q3TIX9 Gm23545-201ENSMUST00000158205 104 ntBASIC4.03□□□□□ -1.76
Usp39Q3TIX9 Gm2389-201ENSMUST00000160487 189 ntBASIC4.03□□□□□ -1.76
Usp39Q3TIX9 Gm23523-201ENSMUST00000180190 107 ntBASIC4.03□□□□□ -1.76
Usp39Q3TIX9 Gm28654-201ENSMUST00000189801 379 ntBASIC4.03□□□□□ -1.76
Usp39Q3TIX9 Gm2719-201ENSMUST00000191929 444 ntBASIC4.03□□□□□ -1.76
Usp39Q3TIX9 Gm38044-201ENSMUST00000192964 487 ntBASIC4.03□□□□□ -1.76
Usp39Q3TIX9 Gm18964-201ENSMUST00000193013 563 ntBASIC4.03□□□□□ -1.76
Usp39Q3TIX9 Trbv11-201ENSMUST00000194354 260 ntBASIC4.03□□□□□ -1.76
Usp39Q3TIX9 Gm7449-201ENSMUST00000194393 663 ntBASIC4.03□□□□□ -1.76
Usp39Q3TIX9 Ighv1-17-1-201ENSMUST00000194849 351 ntBASIC4.03□□□□□ -1.76
Usp39Q3TIX9 Gm42830-201ENSMUST00000196642 313 ntBASIC4.03□□□□□ -1.76
Usp39Q3TIX9 Rpl18a-ps2-201ENSMUST00000197158 174 ntBASIC4.03□□□□□ -1.76
Usp39Q3TIX9 Trav15n-3-201ENSMUST00000200498 168 ntBASIC4.03□□□□□ -1.76
Usp39Q3TIX9 2210414F02Rik-201ENSMUST00000215316 396 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Usp39Q3TIX9 AC160124.1-201ENSMUST00000215539 519 ntTSL 2 BASIC4.03□□□□□ -1.76
Usp39Q3TIX9 Gm5955-201ENSMUST00000222712 219 ntBASIC4.03□□□□□ -1.76
Usp39Q3TIX9 AC139750.2-201ENSMUST00000224424 386 ntBASIC4.03□□□□□ -1.76
Usp39Q3TIX9 Mir383-201ENSMUST00000083523 70 ntBASIC4.03□□□□□ -1.76
Usp39Q3TIX9 Mir28a-201ENSMUST00000083560 86 ntBASIC4.03□□□□□ -1.76
Usp39Q3TIX9 mt-Nd4l-201ENSMUST00000084013 297 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Usp39Q3TIX9 Obox1-201ENSMUST00000067288 1512 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Usp39Q3TIX9 Gm8104-201ENSMUST00000168165 1761 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Usp39Q3TIX9 Olfr1356-202ENSMUST00000205100 3023 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
Usp39Q3TIX9 Srek1-204ENSMUST00000210489 6330 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Usp39Q3TIX9 Plcb4-201ENSMUST00000035646 3635 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Usp39Q3TIX9 Gm4724-201ENSMUST00000109045 1659 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
Usp39Q3TIX9 Vmn1r81-205ENSMUST00000228764 13763 ntAPPRIS P2 BASIC4.03□□□□□ -1.77
Usp39Q3TIX9 Gm10340-201ENSMUST00000170790 1755 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Usp39Q3TIX9 Kctd12b-202ENSMUST00000112572 4851 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Usp39Q3TIX9 Olfr612-202ENSMUST00000214269 2420 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Usp39Q3TIX9 Gm43197-201ENSMUST00000201493 2583 ntBASIC4.02□□□□□ -1.77
Usp39Q3TIX9 Olfr716-207ENSMUST00000216871 4062 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Usp39Q3TIX9 Gm24067-201ENSMUST00000104514 85 ntBASIC4.02□□□□□ -1.77
Usp39Q3TIX9 Gm14915-201ENSMUST00000120747 204 ntBASIC4.02□□□□□ -1.77
Usp39Q3TIX9 Gm6565-201ENSMUST00000121217 438 ntBASIC4.02□□□□□ -1.77
Usp39Q3TIX9 Gm13973-201ENSMUST00000121371 894 ntBASIC4.02□□□□□ -1.77
Usp39Q3TIX9 Gm14916-201ENSMUST00000121904 204 ntBASIC4.02□□□□□ -1.77
Usp39Q3TIX9 Gm15147-201ENSMUST00000122263 483 ntBASIC4.02□□□□□ -1.77
Usp39Q3TIX9 Gm13371-201ENSMUST00000137756 469 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Usp39Q3TIX9 Gm23169-201ENSMUST00000157157 112 ntBASIC4.02□□□□□ -1.77
Usp39Q3TIX9 Gm25718-201ENSMUST00000158632 118 ntBASIC4.02□□□□□ -1.77
Usp39Q3TIX9 Vmn2r-ps59-201ENSMUST00000174596 135 ntBASIC4.02□□□□□ -1.77
Usp39Q3TIX9 Gm23864-201ENSMUST00000177607 107 ntBASIC4.02□□□□□ -1.77
Usp39Q3TIX9 Gm27490-201ENSMUST00000184754 128 ntBASIC4.02□□□□□ -1.77
Usp39Q3TIX9 Gm38270-201ENSMUST00000192721 407 ntBASIC4.02□□□□□ -1.77
Usp39Q3TIX9 Gm8132-201ENSMUST00000204938 640 ntBASIC4.02□□□□□ -1.77
Usp39Q3TIX9 Olfr499-ps1-201ENSMUST00000208811 930 ntBASIC4.02□□□□□ -1.77
Usp39Q3TIX9 CAAA01216754.6-201ENSMUST00000217183 398 ntTSL 5 BASIC4.02□□□□□ -1.77
Usp39Q3TIX9 Ccl5-201ENSMUST00000035938 532 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Usp39Q3TIX9 n-R5s7-201ENSMUST00000083755 121 ntBASIC4.02□□□□□ -1.77
Usp39Q3TIX9 n-R5s151-201ENSMUST00000083959 119 ntBASIC4.02□□□□□ -1.77
Usp39Q3TIX9 Gm6361-201ENSMUST00000091031 435 ntBASIC4.02□□□□□ -1.77
Usp39Q3TIX9 Ptprz1-201ENSMUST00000090568 8068 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
Usp39Q3TIX9 Nlrp2-201ENSMUST00000045022 3404 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Usp39Q3TIX9 Hdx-201ENSMUST00000038472 9385 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Usp39Q3TIX9 Vmn1r82-201ENSMUST00000072801 4784 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Usp39Q3TIX9 Olfr646-202ENSMUST00000214099 3778 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Usp39Q3TIX9 Nap1l1-202ENSMUST00000171797 3926 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Usp39Q3TIX9 Nap1l1-204ENSMUST00000218828 3934 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Usp39Q3TIX9 Olfr290-202ENSMUST00000214501 5196 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Usp39Q3TIX9 Olfr290-204ENSMUST00000216367 5182 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Usp39Q3TIX9 Dst-203ENSMUST00000115104 23279 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
Usp39Q3TIX9 Vmn1r185-207ENSMUST00000227695 5292 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
Usp39Q3TIX9 Gm28154-201ENSMUST00000186267 4218 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Usp39Q3TIX9 Gm43320-201ENSMUST00000196047 2916 ntBASIC4.01□□□□□ -1.77
Usp39Q3TIX9 Iglv3-201ENSMUST00000103751 381 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
Usp39Q3TIX9 Gm24889-201ENSMUST00000104388 132 ntBASIC4.01□□□□□ -1.77
Usp39Q3TIX9 Mir1193-201ENSMUST00000116761 121 ntBASIC4.01□□□□□ -1.77
Usp39Q3TIX9 Gm15426-201ENSMUST00000117823 556 ntBASIC4.01□□□□□ -1.77
Usp39Q3TIX9 Gm12739-201ENSMUST00000119769 382 ntBASIC4.01□□□□□ -1.77
Usp39Q3TIX9 Gm11229-201ENSMUST00000121993 437 ntBASIC4.01□□□□□ -1.77
Usp39Q3TIX9 Gm12708-201ENSMUST00000126143 349 ntTSL 5 BASIC4.01□□□□□ -1.77
Usp39Q3TIX9 Gm6956-201ENSMUST00000134724 546 ntBASIC4.01□□□□□ -1.77
Usp39Q3TIX9 Gm14618-201ENSMUST00000149377 740 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Usp39Q3TIX9 Gm23743-201ENSMUST00000157389 274 ntBASIC4.01□□□□□ -1.77
Usp39Q3TIX9 Gm23585-201ENSMUST00000157656 102 ntBASIC4.01□□□□□ -1.77
Usp39Q3TIX9 Gm23411-201ENSMUST00000157988 62 ntBASIC4.01□□□□□ -1.77
Usp39Q3TIX9 Mir3964-201ENSMUST00000174898 74 ntBASIC4.01□□□□□ -1.77
Usp39Q3TIX9 Mir5134-201ENSMUST00000175529 78 ntBASIC4.01□□□□□ -1.77
Usp39Q3TIX9 Mir5624-201ENSMUST00000176635 61 ntBASIC4.01□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 82.9 ms