Protein–RNA interactions for Protein: Q3MI99

Ccbe1, Collagen and calcium-binding EGF domain-containing protein 1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccbe1Q3MI99 Gm8104-201ENSMUST00000168165 1761 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Ccbe1Q3MI99 Obox4-ps12-201ENSMUST00000180084 1362 ntBASIC4.04□□□□□ -1.76
Ccbe1Q3MI99 2310003L06Rik-201ENSMUST00000007601 1603 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Ccbe1Q3MI99 Vmn1r216-203ENSMUST00000228389 10213 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
Ccbe1Q3MI99 Trav12d-2-201ENSMUST00000103593 341 ntAPPRIS ALT2 BASIC4.04□□□□□ -1.76
Ccbe1Q3MI99 Trav12n-2-201ENSMUST00000103619 341 ntAPPRIS ALT2 BASIC4.04□□□□□ -1.76
Ccbe1Q3MI99 Gm24578-201ENSMUST00000103970 129 ntBASIC4.04□□□□□ -1.76
Ccbe1Q3MI99 Gm11366-201ENSMUST00000119279 429 ntBASIC4.04□□□□□ -1.76
Ccbe1Q3MI99 Gm6797-201ENSMUST00000119440 512 ntBASIC4.04□□□□□ -1.76
Ccbe1Q3MI99 2210408F21Rik-202ENSMUST00000124811 384 ntTSL 2 BASIC4.04□□□□□ -1.76
Ccbe1Q3MI99 4930597A21Rik-201ENSMUST00000128652 698 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Ccbe1Q3MI99 Gm12711-201ENSMUST00000131249 340 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Ccbe1Q3MI99 Zfp950-205ENSMUST00000148569 192 ntTSL 5 BASIC4.04□□□□□ -1.76
Ccbe1Q3MI99 Gm16303-201ENSMUST00000161498 390 ntBASIC4.04□□□□□ -1.76
Ccbe1Q3MI99 Gm14819-202ENSMUST00000169396 639 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Ccbe1Q3MI99 AU023070-201ENSMUST00000176972 387 ntTSL 2 BASIC4.04□□□□□ -1.76
Ccbe1Q3MI99 Gm10487-201ENSMUST00000177566 639 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Ccbe1Q3MI99 Gm22716-201ENSMUST00000177596 107 ntBASIC4.04□□□□□ -1.76
Ccbe1Q3MI99 Gm14632-202ENSMUST00000177917 639 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Ccbe1Q3MI99 Gm4761-201ENSMUST00000178086 582 ntBASIC4.04□□□□□ -1.76
Ccbe1Q3MI99 Gm10058-202ENSMUST00000178152 639 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Ccbe1Q3MI99 Gm10096-201ENSMUST00000178672 639 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Ccbe1Q3MI99 Gm10230-202ENSMUST00000178745 639 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Ccbe1Q3MI99 Gm2092-201ENSMUST00000178887 639 ntBASIC4.04□□□□□ -1.76
Ccbe1Q3MI99 Gm10147-202ENSMUST00000178966 639 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Ccbe1Q3MI99 Gm2759-201ENSMUST00000179938 639 ntBASIC4.04□□□□□ -1.76
Ccbe1Q3MI99 Gm21960-201ENSMUST00000181924 452 ntBASIC4.04□□□□□ -1.76
Ccbe1Q3MI99 Ranbp2-ps5-201ENSMUST00000185141 379 ntBASIC4.04□□□□□ -1.76
Ccbe1Q3MI99 Gm8132-201ENSMUST00000204938 640 ntBASIC4.04□□□□□ -1.76
Ccbe1Q3MI99 Gm45686-201ENSMUST00000210259 460 ntTSL 5 BASIC4.04□□□□□ -1.76
Ccbe1Q3MI99 Gm7786-201ENSMUST00000210494 436 ntBASIC4.04□□□□□ -1.76
Ccbe1Q3MI99 Gm45616-201ENSMUST00000211711 319 ntBASIC4.04□□□□□ -1.76
Ccbe1Q3MI99 Gm45439-201ENSMUST00000211723 359 ntBASIC4.04□□□□□ -1.76
Ccbe1Q3MI99 Olfr1202-203ENSMUST00000217059 1153 ntAPPRIS P1 TSL 3 BASIC4.04□□□□□ -1.76
Ccbe1Q3MI99 AC158803.3-201ENSMUST00000220024 211 ntBASIC4.04□□□□□ -1.76
Ccbe1Q3MI99 Gm34408-201ENSMUST00000222104 655 ntTSL 5 BASIC4.04□□□□□ -1.76
Ccbe1Q3MI99 Gm46997-201ENSMUST00000222108 217 ntBASIC4.04□□□□□ -1.76
Ccbe1Q3MI99 AC122393.3-201ENSMUST00000226343 1059 ntBASIC4.04□□□□□ -1.76
Ccbe1Q3MI99 Sprr2f-201ENSMUST00000050397 609 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
Ccbe1Q3MI99 Olfr1204-201ENSMUST00000078631 930 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
Ccbe1Q3MI99 9530051G07Rik-201ENSMUST00000127673 4414 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
Ccbe1Q3MI99 Olfr437-202ENSMUST00000205175 2952 ntAPPRIS P1 TSL 5 BASIC4.04□□□□□ -1.76
Ccbe1Q3MI99 Gm7470-201ENSMUST00000194219 2095 ntBASIC4.04□□□□□ -1.76
Ccbe1Q3MI99 Gm42870-201ENSMUST00000199355 3470 ntBASIC4.04□□□□□ -1.76
Ccbe1Q3MI99 Cd200r3-209ENSMUST00000166731 3876 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
Ccbe1Q3MI99 Dnah12-201ENSMUST00000022433 12009 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Ccbe1Q3MI99 Vmn1r52-205ENSMUST00000227893 3108 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
Ccbe1Q3MI99 Efhc2-201ENSMUST00000026014 2554 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
Ccbe1Q3MI99 Tfpi-202ENSMUST00000090732 3576 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Ccbe1Q3MI99 Gm14125-201ENSMUST00000113442 680 ntBASIC4.03□□□□□ -1.76
Ccbe1Q3MI99 Hmgb1-ps2-201ENSMUST00000117548 636 ntBASIC4.03□□□□□ -1.76
Ccbe1Q3MI99 Gm16128-201ENSMUST00000117855 626 ntBASIC4.03□□□□□ -1.76
Ccbe1Q3MI99 Rpl31-ps22-201ENSMUST00000117961 337 ntBASIC4.03□□□□□ -1.76
Ccbe1Q3MI99 Gm13550-201ENSMUST00000118185 525 ntBASIC4.03□□□□□ -1.76
Ccbe1Q3MI99 Hmgb1-ps3-201ENSMUST00000118415 636 ntBASIC4.03□□□□□ -1.76
Ccbe1Q3MI99 Gm15553-201ENSMUST00000118757 430 ntBASIC4.03□□□□□ -1.76
Ccbe1Q3MI99 Gm12512-201ENSMUST00000119620 217 ntBASIC4.03□□□□□ -1.76
Ccbe1Q3MI99 Gm13213-201ENSMUST00000119668 474 ntBASIC4.03□□□□□ -1.76
Ccbe1Q3MI99 Gm9043-201ENSMUST00000119677 314 ntBASIC4.03□□□□□ -1.76
Ccbe1Q3MI99 Gm15387-201ENSMUST00000120421 648 ntBASIC4.03□□□□□ -1.76
Ccbe1Q3MI99 Gm14008-201ENSMUST00000120483 274 ntBASIC4.03□□□□□ -1.76
Ccbe1Q3MI99 Gm12872-201ENSMUST00000121835 320 ntBASIC4.03□□□□□ -1.76
Ccbe1Q3MI99 Gm22960-201ENSMUST00000122517 104 ntBASIC4.03□□□□□ -1.76
Ccbe1Q3MI99 Gm17025-201ENSMUST00000133273 580 ntTSL 2 BASIC4.03□□□□□ -1.76
Ccbe1Q3MI99 Gm6956-201ENSMUST00000134724 546 ntBASIC4.03□□□□□ -1.76
Ccbe1Q3MI99 Gm11967-201ENSMUST00000135132 480 ntTSL 2 BASIC4.03□□□□□ -1.76
Ccbe1Q3MI99 Gm11337-201ENSMUST00000144770 335 ntTSL 2 BASIC4.03□□□□□ -1.76
Ccbe1Q3MI99 Gm22561-201ENSMUST00000157331 84 ntBASIC4.03□□□□□ -1.76
Ccbe1Q3MI99 Gm23513-201ENSMUST00000158181 133 ntBASIC4.03□□□□□ -1.76
Ccbe1Q3MI99 Snora15-201ENSMUST00000177461 131 ntBASIC4.03□□□□□ -1.76
Ccbe1Q3MI99 Gm26430-201ENSMUST00000178054 107 ntBASIC4.03□□□□□ -1.76
Ccbe1Q3MI99 Hmgb1-ps9-201ENSMUST00000179479 645 ntBASIC4.03□□□□□ -1.76
Ccbe1Q3MI99 Gm8649-201ENSMUST00000181799 233 ntBASIC4.03□□□□□ -1.76
Ccbe1Q3MI99 Gm26962-201ENSMUST00000182545 265 ntTSL 3 BASIC4.03□□□□□ -1.76
Ccbe1Q3MI99 Mir7012-201ENSMUST00000183900 64 ntBASIC4.03□□□□□ -1.76
Ccbe1Q3MI99 Gm27286-201ENSMUST00000184934 179 ntBASIC4.03□□□□□ -1.76
Ccbe1Q3MI99 Rpl23a-ps10-201ENSMUST00000185511 462 ntBASIC4.03□□□□□ -1.76
Ccbe1Q3MI99 Gm3145-201ENSMUST00000188584 220 ntBASIC4.03□□□□□ -1.76
Ccbe1Q3MI99 Gm37882-201ENSMUST00000195254 196 ntBASIC4.03□□□□□ -1.76
Ccbe1Q3MI99 Gm44343-201ENSMUST00000196702 90 ntBASIC4.03□□□□□ -1.76
Ccbe1Q3MI99 Vmn1r-ps6-202ENSMUST00000202526 135 ntTSL 5 BASIC4.03□□□□□ -1.76
Ccbe1Q3MI99 Gm45702-201ENSMUST00000211856 644 ntTSL 2 BASIC4.03□□□□□ -1.76
Ccbe1Q3MI99 Gm2607-201ENSMUST00000212389 627 ntBASIC4.03□□□□□ -1.76
Ccbe1Q3MI99 AC134596.2-201ENSMUST00000222158 171 ntBASIC4.03□□□□□ -1.76
Ccbe1Q3MI99 Gm26447-201ENSMUST00000082448 129 ntBASIC4.03□□□□□ -1.76
Ccbe1Q3MI99 Gm23447-201ENSMUST00000082798 163 ntBASIC4.03□□□□□ -1.76
Ccbe1Q3MI99 Gm25699-201ENSMUST00000082896 167 ntBASIC4.03□□□□□ -1.76
Ccbe1Q3MI99 Gm25140-201ENSMUST00000083254 140 ntBASIC4.03□□□□□ -1.76
Ccbe1Q3MI99 Gm23733-201ENSMUST00000083750 106 ntBASIC4.03□□□□□ -1.76
Ccbe1Q3MI99 Gm5518-201ENSMUST00000084171 648 ntBASIC4.03□□□□□ -1.76
Ccbe1Q3MI99 Gm15102-201ENSMUST00000118740 1502 ntBASIC4.03□□□□□ -1.76
Ccbe1Q3MI99 Gm29260-201ENSMUST00000186391 2759 ntTSL 3 BASIC4.03□□□□□ -1.76
Ccbe1Q3MI99 Olfr164-202ENSMUST00000216157 2792 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
Ccbe1Q3MI99 A830019L24Rik-201ENSMUST00000197226 1652 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
Ccbe1Q3MI99 Cnot6l-210ENSMUST00000155901 8564 ntAPPRIS P3 TSL 1 (best) BASIC4.03□□□□□ -1.76
Ccbe1Q3MI99 Spag17-204ENSMUST00000164539 7862 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Ccbe1Q3MI99 B3galt1-202ENSMUST00000112346 4977 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Ccbe1Q3MI99 Cdh7-209ENSMUST00000172005 3353 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Ccbe1Q3MI99 Macc1-203ENSMUST00000221917 4272 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Ccbe1Q3MI99 Gm37192-201ENSMUST00000194479 1348 ntBASIC4.02□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 77.2 ms