Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 2810429I04Rik-209ENSMUST00000188642 674 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Col8a1Q00780 Gm30280-201ENSMUST00000192214 262 ntBASIC3.91□□□□□ -1.78
Col8a1Q00780 Gm37801-201ENSMUST00000194754 274 ntBASIC3.91□□□□□ -1.78
Col8a1Q00780 Gm44481-201ENSMUST00000197288 84 ntBASIC3.91□□□□□ -1.78
Col8a1Q00780 Gm44339-201ENSMUST00000200598 84 ntBASIC3.91□□□□□ -1.78
Col8a1Q00780 Gm12845-202ENSMUST00000204276 1431 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
Col8a1Q00780 Gm19126-201ENSMUST00000207896 509 ntBASIC3.91□□□□□ -1.78
Col8a1Q00780 Gm45327-201ENSMUST00000211612 565 ntBASIC3.91□□□□□ -1.78
Col8a1Q00780 5430401H09Rik-201ENSMUST00000218145 1076 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Col8a1Q00780 Platr25-204ENSMUST00000221996 2458 ntAPPRIS ALT2 TSL 2 BASIC3.91□□□□□ -1.78
Col8a1Q00780 CT485612.4-201ENSMUST00000223405 250 ntBASIC3.91□□□□□ -1.78
Col8a1Q00780 Gm28044-201ENSMUST00000044819 551 ntAPPRIS P1 TSL 3 BASIC3.91□□□□□ -1.78
Col8a1Q00780 Vmn1r63-201ENSMUST00000075085 2172 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
Col8a1Q00780 Nxt2-202ENSMUST00000112913 2538 ntTSL 3 BASIC3.91□□□□□ -1.78
Col8a1Q00780 Lpar4-201ENSMUST00000060576 4238 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
Col8a1Q00780 Btbd35f12-201ENSMUST00000178827 1908 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
Col8a1Q00780 Ifi208-202ENSMUST00000169857 1767 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Col8a1Q00780 Gm26753-201ENSMUST00000181938 2731 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Col8a1Q00780 Slc5a12-201ENSMUST00000045972 3529 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Col8a1Q00780 Olfr59-201ENSMUST00000143976 3088 ntAPPRIS P1 TSL 3 BASIC3.91□□□□□ -1.78
Col8a1Q00780 Cyp3a59-201ENSMUST00000035571 1990 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
Col8a1Q00780 Gm6710-202ENSMUST00000109012 1665 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
Col8a1Q00780 Gm14391-206ENSMUST00000165892 1665 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
Col8a1Q00780 Olfr1223-201ENSMUST00000217342 2333 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.78
Col8a1Q00780 Gm381-201ENSMUST00000117443 2037 ntBASIC3.9□□□□□ -1.78
Col8a1Q00780 4930467D21Rik-201ENSMUST00000180634 2530 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
Col8a1Q00780 Zfp62-201ENSMUST00000061757 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
Col8a1Q00780 Tnfrsf26-202ENSMUST00000208124 3062 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
Col8a1Q00780 Mid2-203ENSMUST00000112993 5916 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
Col8a1Q00780 Adam5-205ENSMUST00000209935 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
Col8a1Q00780 Kcnt2-201ENSMUST00000119786 3624 ntTSL 5 BASIC3.9□□□□□ -1.79
Col8a1Q00780 Gm8402-201ENSMUST00000118183 1770 ntBASIC3.9□□□□□ -1.79
Col8a1Q00780 Gm8383-201ENSMUST00000121179 1770 ntBASIC3.9□□□□□ -1.79
Col8a1Q00780 Gm25915-201ENSMUST00000104265 126 ntBASIC3.9□□□□□ -1.79
Col8a1Q00780 Mir879-201ENSMUST00000104703 76 ntBASIC3.9□□□□□ -1.79
Col8a1Q00780 Tfpi-205ENSMUST00000111717 2962 ntTSL 5 BASIC3.9□□□□□ -1.79
Col8a1Q00780 Rpl38-ps2-201ENSMUST00000117356 213 ntBASIC3.9□□□□□ -1.79
Col8a1Q00780 Gm8129-201ENSMUST00000118230 213 ntBASIC3.9□□□□□ -1.79
Col8a1Q00780 Gm15951-201ENSMUST00000118377 400 ntBASIC3.9□□□□□ -1.79
Col8a1Q00780 Tpt1-ps3-201ENSMUST00000121046 519 ntBASIC3.9□□□□□ -1.79
Col8a1Q00780 Cdrt4os2-201ENSMUST00000128675 494 ntTSL 2 BASIC3.9□□□□□ -1.79
Col8a1Q00780 Gm22433-201ENSMUST00000158550 142 ntBASIC3.9□□□□□ -1.79
Col8a1Q00780 Gm26005-201ENSMUST00000158802 134 ntBASIC3.9□□□□□ -1.79
Col8a1Q00780 Gm6802-202ENSMUST00000186566 126 ntBASIC3.9□□□□□ -1.79
Col8a1Q00780 Gm38011-201ENSMUST00000193312 279 ntBASIC3.9□□□□□ -1.79
Col8a1Q00780 Gm43855-201ENSMUST00000197462 507 ntBASIC3.9□□□□□ -1.79
Col8a1Q00780 Mir691-201ENSMUST00000199719 78 ntBASIC3.9□□□□□ -1.79
Col8a1Q00780 Igkv8-31-201ENSMUST00000200040 372 ntBASIC3.9□□□□□ -1.79
Col8a1Q00780 Gm44825-201ENSMUST00000207557 150 ntBASIC3.9□□□□□ -1.79
Col8a1Q00780 Gm44598-201ENSMUST00000207566 150 ntBASIC3.9□□□□□ -1.79
Col8a1Q00780 AC115034.1-201ENSMUST00000215393 3846 ntBASIC3.9□□□□□ -1.79
Col8a1Q00780 AC156632.1-201ENSMUST00000220626 3845 ntBASIC3.9□□□□□ -1.79
Col8a1Q00780 AC113031.3-201ENSMUST00000226552 190 ntBASIC3.9□□□□□ -1.79
Col8a1Q00780 AC100733.1-201ENSMUST00000228494 407 ntBASIC3.9□□□□□ -1.79
Col8a1Q00780 Gm5548-201ENSMUST00000055878 397 ntBASIC3.9□□□□□ -1.79
Col8a1Q00780 2610044O15Rik8-201ENSMUST00000079272 264 ntTSL 5 BASIC3.9□□□□□ -1.79
Col8a1Q00780 Gm24045-201ENSMUST00000083113 98 ntBASIC3.9□□□□□ -1.79
Col8a1Q00780 n-R5s7-201ENSMUST00000083755 121 ntBASIC3.9□□□□□ -1.79
Col8a1Q00780 F9-201ENSMUST00000033477 2734 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
Col8a1Q00780 Zp3r-201ENSMUST00000039862 2042 ntAPPRIS P2 TSL 1 (best) BASIC3.9□□□□□ -1.79
Col8a1Q00780 Cftr-201ENSMUST00000045706 6303 ntAPPRIS P2 TSL 1 (best) BASIC3.9□□□□□ -1.79
Col8a1Q00780 Trim30b-205ENSMUST00000171830 2771 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Col8a1Q00780 Gm43185-201ENSMUST00000197507 2775 ntBASIC3.9□□□□□ -1.79
Col8a1Q00780 Gm28465-202ENSMUST00000220779 1701 ntTSL 5 BASIC3.9□□□□□ -1.79
Col8a1Q00780 Ncoa7-207ENSMUST00000215740 7043 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
Col8a1Q00780 Olfr1353-203ENSMUST00000205193 1924 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Col8a1Q00780 Gm5362-201ENSMUST00000211968 3085 ntBASIC3.89□□□□□ -1.79
Col8a1Q00780 Gm14014-201ENSMUST00000156718 2717 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
Col8a1Q00780 Gm43281-201ENSMUST00000202522 2704 ntBASIC3.89□□□□□ -1.79
Col8a1Q00780 Gm37393-201ENSMUST00000195118 3870 ntBASIC3.89□□□□□ -1.79
Col8a1Q00780 Olfr992-202ENSMUST00000213749 2150 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Col8a1Q00780 AC108802.1-201ENSMUST00000219501 3142 ntBASIC3.89□□□□□ -1.79
Col8a1Q00780 Olfr1123-203ENSMUST00000216208 5245 ntAPPRIS ALT2 TSL 2 BASIC3.89□□□□□ -1.79
Col8a1Q00780 Acsm3-203ENSMUST00000106527 2557 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Col8a1Q00780 Vmn2r110-201ENSMUST00000169559 2577 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Col8a1Q00780 Olfr620-201ENSMUST00000052152 3157 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
Col8a1Q00780 Vmn1r72-203ENSMUST00000227010 6279 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
Col8a1Q00780 Gm13664-201ENSMUST00000117304 345 ntBASIC3.89□□□□□ -1.79
Col8a1Q00780 Gm14003-201ENSMUST00000130919 313 ntTSL 3 BASIC3.89□□□□□ -1.79
Col8a1Q00780 Trav20-201ENSMUST00000142754 347 ntBASIC3.89□□□□□ -1.79
Col8a1Q00780 Gm14697-201ENSMUST00000147144 648 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
Col8a1Q00780 Gm23743-201ENSMUST00000157389 274 ntBASIC3.89□□□□□ -1.79
Col8a1Q00780 Gm24931-201ENSMUST00000158324 107 ntBASIC3.89□□□□□ -1.79
Col8a1Q00780 Gm24167-201ENSMUST00000177733 124 ntBASIC3.89□□□□□ -1.79
Col8a1Q00780 Gm24028-201ENSMUST00000178991 124 ntBASIC3.89□□□□□ -1.79
Col8a1Q00780 Gm23860-201ENSMUST00000179446 132 ntBASIC3.89□□□□□ -1.79
Col8a1Q00780 Gm23966-201ENSMUST00000179823 107 ntBASIC3.89□□□□□ -1.79
Col8a1Q00780 Gm27997-201ENSMUST00000184942 69 ntBASIC3.89□□□□□ -1.79
Col8a1Q00780 Gm28967-201ENSMUST00000187351 281 ntBASIC3.89□□□□□ -1.79
Col8a1Q00780 Gm28534-201ENSMUST00000187744 676 ntBASIC3.89□□□□□ -1.79
Col8a1Q00780 Gm38060-201ENSMUST00000194822 464 ntBASIC3.89□□□□□ -1.79
Col8a1Q00780 Gm44145-201ENSMUST00000203711 172 ntTSL 3 BASIC3.89□□□□□ -1.79
Col8a1Q00780 Gm4045-201ENSMUST00000204076 310 ntBASIC3.89□□□□□ -1.79
Col8a1Q00780 Gm44583-201ENSMUST00000207478 281 ntBASIC3.89□□□□□ -1.79
Col8a1Q00780 Gm31717-201ENSMUST00000213044 668 ntTSL 5 BASIC3.89□□□□□ -1.79
Col8a1Q00780 Gm3086-202ENSMUST00000221248 310 ntBASIC3.89□□□□□ -1.79
Col8a1Q00780 AL590503.1-201ENSMUST00000222053 321 ntBASIC3.89□□□□□ -1.79
Col8a1Q00780 AC118639.1-201ENSMUST00000227204 338 ntBASIC3.89□□□□□ -1.79
Col8a1Q00780 AC154618.1-201ENSMUST00000227451 303 ntBASIC3.89□□□□□ -1.79
Col8a1Q00780 Olfr1009-201ENSMUST00000055517 945 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 86.4 ms