Protein–RNA interactions for Protein: P70362

Ufd1, Ubiquitin recognition factor in ER-associated degradation protein 1, mousemouse

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ufd1P70362 Snord14c-201ENSMUST00000101927 86 ntBASIC2.58□□□□□ -2
Ufd1P70362 Gm15312-201ENSMUST00000118827 271 ntBASIC2.58□□□□□ -2
Ufd1P70362 Gm15268-201ENSMUST00000118845 352 ntBASIC2.58□□□□□ -2
Ufd1P70362 Gm15112-201ENSMUST00000120152 860 ntBASIC2.58□□□□□ -2
Ufd1P70362 Gm1993-201ENSMUST00000120268 1131 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Ufd1P70362 Gm12617-201ENSMUST00000121268 381 ntBASIC2.58□□□□□ -2
Ufd1P70362 Gm15309-201ENSMUST00000121644 240 ntBASIC2.58□□□□□ -2
Ufd1P70362 Gm26101-201ENSMUST00000157246 105 ntBASIC2.58□□□□□ -2
Ufd1P70362 Gm25391-201ENSMUST00000157342 134 ntBASIC2.58□□□□□ -2
Ufd1P70362 Gm23084-201ENSMUST00000157850 114 ntBASIC2.58□□□□□ -2
Ufd1P70362 Olfr180-201ENSMUST00000171656 1154 ntAPPRIS P2 TSL 2 BASIC2.58□□□□□ -2
Ufd1P70362 Vmn1r-ps24-201ENSMUST00000175772 900 ntBASIC2.58□□□□□ -2
Ufd1P70362 Gm26585-201ENSMUST00000180890 630 ntBASIC2.58□□□□□ -2
Ufd1P70362 Gm18448-201ENSMUST00000186286 599 ntBASIC2.58□□□□□ -2
Ufd1P70362 Gm29602-201ENSMUST00000186887 442 ntBASIC2.58□□□□□ -2
Ufd1P70362 AV026068-206ENSMUST00000187461 513 ntTSL 2 BASIC2.58□□□□□ -2
Ufd1P70362 Gm37587-202ENSMUST00000194935 475 ntTSL 3 BASIC2.58□□□□□ -2
Ufd1P70362 Gm42805-201ENSMUST00000196158 276 ntBASIC2.58□□□□□ -2
Ufd1P70362 Gm18429-201ENSMUST00000198707 421 ntBASIC2.58□□□□□ -2
Ufd1P70362 Tprkb-214ENSMUST00000202803 716 ntTSL 1 (best) BASIC2.58□□□□□ -2
Ufd1P70362 Gm30146-201ENSMUST00000206564 605 ntTSL 1 (best) BASIC2.58□□□□□ -2
Ufd1P70362 Gm44718-201ENSMUST00000206886 359 ntBASIC2.58□□□□□ -2
Ufd1P70362 Gm45209-201ENSMUST00000207122 353 ntBASIC2.58□□□□□ -2
Ufd1P70362 Olfr886-ps1-201ENSMUST00000212395 708 ntBASIC2.58□□□□□ -2
Ufd1P70362 D830005E20Rik-202ENSMUST00000219691 971 ntTSL 5 BASIC2.58□□□□□ -2
Ufd1P70362 Gm8231-201ENSMUST00000221617 783 ntBASIC2.58□□□□□ -2
Ufd1P70362 S100z-201ENSMUST00000022186 399 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Ufd1P70362 AC160930.1-201ENSMUST00000227194 337 ntBASIC2.58□□□□□ -2
Ufd1P70362 AC133076.1-201ENSMUST00000228074 484 ntBASIC2.58□□□□□ -2
Ufd1P70362 Gm7984-201ENSMUST00000060640 538 ntBASIC2.58□□□□□ -2
Ufd1P70362 Gm6812-201ENSMUST00000074894 525 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Ufd1P70362 1700020N15Rik-201ENSMUST00000075654 525 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
Ufd1P70362 Gm43780-201ENSMUST00000196510 3600 ntBASIC2.58□□□□□ -2
Ufd1P70362 Gm37999-201ENSMUST00000195178 1809 ntBASIC2.58□□□□□ -2
Ufd1P70362 Vmn1r79-203ENSMUST00000227530 5581 ntAPPRIS P1 BASIC2.57□□□□□ -2
Ufd1P70362 Gm45884-201ENSMUST00000209540 3416 ntBASIC2.57□□□□□ -2
Ufd1P70362 Gm45104-201ENSMUST00000208748 4350 ntBASIC2.57□□□□□ -2
Ufd1P70362 Gm24469-201ENSMUST00000104487 131 ntBASIC2.57□□□□□ -2
Ufd1P70362 Gm15282-201ENSMUST00000117707 300 ntBASIC2.57□□□□□ -2
Ufd1P70362 Gm14594-201ENSMUST00000118052 537 ntBASIC2.57□□□□□ -2
Ufd1P70362 Gm11813-201ENSMUST00000118586 291 ntBASIC2.57□□□□□ -2
Ufd1P70362 Gm14359-201ENSMUST00000118883 424 ntBASIC2.57□□□□□ -2
Ufd1P70362 Gm14590-201ENSMUST00000118934 537 ntBASIC2.57□□□□□ -2
Ufd1P70362 Gm14360-201ENSMUST00000120670 393 ntBASIC2.57□□□□□ -2
Ufd1P70362 Gm14841-201ENSMUST00000121067 758 ntBASIC2.57□□□□□ -2
Ufd1P70362 Gm14411-201ENSMUST00000121798 914 ntBASIC2.57□□□□□ -2
Ufd1P70362 1700119I11Rik-201ENSMUST00000122270 336 ntTSL 1 (best) BASIC2.57□□□□□ -2
Ufd1P70362 Gm13901-201ENSMUST00000137252 468 ntBASIC2.57□□□□□ -2
Ufd1P70362 Gm9498-201ENSMUST00000140849 291 ntBASIC2.57□□□□□ -2
Ufd1P70362 Gm24475-201ENSMUST00000157435 143 ntBASIC2.57□□□□□ -2
Ufd1P70362 Gm23540-201ENSMUST00000157543 164 ntBASIC2.57□□□□□ -2
Ufd1P70362 Gm18358-201ENSMUST00000173179 1277 ntBASIC2.57□□□□□ -2
Ufd1P70362 Gm21241-201ENSMUST00000179551 934 ntBASIC2.57□□□□□ -2
Ufd1P70362 Gm14596-201ENSMUST00000180268 537 ntBASIC2.57□□□□□ -2
Ufd1P70362 Gm14595-201ENSMUST00000180335 537 ntBASIC2.57□□□□□ -2
Ufd1P70362 Mir6338-201ENSMUST00000183389 109 ntBASIC2.57□□□□□ -2
Ufd1P70362 Gm27659-201ENSMUST00000183472 98 ntBASIC2.57□□□□□ -2
Ufd1P70362 Gm27611-201ENSMUST00000184690 108 ntBASIC2.57□□□□□ -2
Ufd1P70362 Gm27520-201ENSMUST00000184872 81 ntBASIC2.57□□□□□ -2
Ufd1P70362 Gm29582-201ENSMUST00000185667 931 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Ufd1P70362 Gm28054-201ENSMUST00000187280 872 ntTSL 3 BASIC2.57□□□□□ -2
Ufd1P70362 Gm20838-202ENSMUST00000187712 931 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Ufd1P70362 1700040F15Rik-201ENSMUST00000188244 931 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Ufd1P70362 Gm21996-201ENSMUST00000188269 931 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Ufd1P70362 Gm21256-202ENSMUST00000188881 932 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Ufd1P70362 Gm21739-202ENSMUST00000188917 933 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Ufd1P70362 Gm28891-202ENSMUST00000189333 927 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Ufd1P70362 Gm21094-202ENSMUST00000189577 926 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Ufd1P70362 Gm29553-201ENSMUST00000189692 279 ntBASIC2.57□□□□□ -2
Ufd1P70362 Gm20792-201ENSMUST00000189765 931 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Ufd1P70362 Gm28919-201ENSMUST00000190026 920 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Ufd1P70362 Gm21861-202ENSMUST00000190806 931 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Ufd1P70362 Gm20819-201ENSMUST00000191091 925 ntBASIC2.57□□□□□ -2
Ufd1P70362 Gm20871-201ENSMUST00000191322 931 ntBASIC2.57□□□□□ -2
Ufd1P70362 Gm21865-202ENSMUST00000191443 923 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Ufd1P70362 Gm37599-201ENSMUST00000193067 489 ntBASIC2.57□□□□□ -2
Ufd1P70362 Igkv15-97-201ENSMUST00000197637 339 ntBASIC2.57□□□□□ -2
Ufd1P70362 Gm2189-201ENSMUST00000201419 429 ntBASIC2.57□□□□□ -2
Ufd1P70362 Gm18691-201ENSMUST00000203593 872 ntBASIC2.57□□□□□ -2
Ufd1P70362 Gm44927-201ENSMUST00000207573 716 ntBASIC2.57□□□□□ -2
Ufd1P70362 AC160030.1-201ENSMUST00000218916 506 ntTSL 2 BASIC2.57□□□□□ -2
Ufd1P70362 Olfr791-201ENSMUST00000057477 939 ntAPPRIS P1 BASIC2.57□□□□□ -2
Ufd1P70362 Mir134-201ENSMUST00000083492 71 ntBASIC2.57□□□□□ -2
Ufd1P70362 Vmn2r74-201ENSMUST00000166355 2562 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Ufd1P70362 Mgat4c-211ENSMUST00000163753 3862 ntAPPRIS P1 TSL 3 BASIC2.57□□□□□ -2
Ufd1P70362 Gm42445-201ENSMUST00000196996 2893 ntBASIC2.57□□□□□ -2
Ufd1P70362 Gm37630-201ENSMUST00000194210 1456 ntBASIC2.57□□□□□ -2
Ufd1P70362 Gm44049-201ENSMUST00000204905 2984 ntBASIC2.57□□□□□ -2
Ufd1P70362 Rgs13-202ENSMUST00000111941 1545 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Ufd1P70362 Gm43663-201ENSMUST00000198643 1505 ntBASIC2.57□□□□□ -2
Ufd1P70362 Nlrp9c-202ENSMUST00000085944 3216 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Ufd1P70362 Gm32693-201ENSMUST00000196538 2402 ntTSL 1 (best) BASIC2.57□□□□□ -2
Ufd1P70362 Vmn2r71-201ENSMUST00000172338 2568 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Ufd1P70362 Zfp40-206ENSMUST00000172177 2736 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Ufd1P70362 Fnd3c2-201ENSMUST00000091282 3662 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Ufd1P70362 Olfr937-202ENSMUST00000215049 2259 ntAPPRIS P1 TSL 3 BASIC2.56□□□□□ -2
Ufd1P70362 Gm26341-201ENSMUST00000104561 134 ntBASIC2.56□□□□□ -2
Ufd1P70362 Gm26473-201ENSMUST00000116763 127 ntBASIC2.56□□□□□ -2
Ufd1P70362 Gm13761-201ENSMUST00000117238 807 ntBASIC2.56□□□□□ -2
Ufd1P70362 Gm12335-201ENSMUST00000119738 327 ntBASIC2.56□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 83.2 ms