Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Gm13607-201ENSMUST00000117875 539 ntBASIC4.29□□□□□ -1.72
Hmgb1P63158 Dnaic1-202ENSMUST00000119127 500 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Hmgb1P63158 Gm12748-201ENSMUST00000120763 504 ntBASIC4.29□□□□□ -1.72
Hmgb1P63158 Gm11931-201ENSMUST00000121630 447 ntBASIC4.29□□□□□ -1.72
Hmgb1P63158 Gm13852-201ENSMUST00000122350 242 ntBASIC4.29□□□□□ -1.72
Hmgb1P63158 Gm25052-201ENSMUST00000122661 158 ntBASIC4.29□□□□□ -1.72
Hmgb1P63158 Gm23212-201ENSMUST00000122718 60 ntBASIC4.29□□□□□ -1.72
Hmgb1P63158 Pfdn4-205ENSMUST00000136839 452 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Hmgb1P63158 Gm12195-201ENSMUST00000144990 469 ntTSL 3 BASIC4.29□□□□□ -1.72
Hmgb1P63158 Gm22320-201ENSMUST00000157149 312 ntBASIC4.29□□□□□ -1.72
Hmgb1P63158 Gm44919-201ENSMUST00000208587 1073 ntBASIC4.29□□□□□ -1.72
Hmgb1P63158 AC105958.2-201ENSMUST00000214167 191 ntBASIC4.29□□□□□ -1.72
Hmgb1P63158 Olfr1005-ps1-201ENSMUST00000216207 488 ntBASIC4.29□□□□□ -1.72
Hmgb1P63158 Olfr294-201ENSMUST00000078588 1008 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Hmgb1P63158 Olfr175-ps1-201ENSMUST00000079955 1169 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
Hmgb1P63158 Gm22229-201ENSMUST00000082987 108 ntBASIC4.29□□□□□ -1.72
Hmgb1P63158 Snora70-201ENSMUST00000083047 137 ntBASIC4.29□□□□□ -1.72
Hmgb1P63158 Mir30e-201ENSMUST00000083475 92 ntBASIC4.29□□□□□ -1.72
Hmgb1P63158 Gm25257-201ENSMUST00000083907 110 ntBASIC4.29□□□□□ -1.72
Hmgb1P63158 Fam81b-201ENSMUST00000208418 2760 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Hmgb1P63158 Zscan4f-202ENSMUST00000145237 1829 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Hmgb1P63158 AC152159.1-201ENSMUST00000226719 2769 ntBASIC4.28□□□□□ -1.72
Hmgb1P63158 Gm14429-201ENSMUST00000121881 2024 ntBASIC4.28□□□□□ -1.72
Hmgb1P63158 Cp-205ENSMUST00000108329 4564 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
Hmgb1P63158 Gm4736-201ENSMUST00000100870 380 ntBASIC4.28□□□□□ -1.72
Hmgb1P63158 Mir761-201ENSMUST00000103245 76 ntBASIC4.28□□□□□ -1.72
Hmgb1P63158 Trbv5-201ENSMUST00000103266 368 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Hmgb1P63158 Gm15151-201ENSMUST00000117106 177 ntBASIC4.28□□□□□ -1.72
Hmgb1P63158 Gm13804-201ENSMUST00000119552 172 ntBASIC4.28□□□□□ -1.72
Hmgb1P63158 Gm14159-201ENSMUST00000119832 451 ntBASIC4.28□□□□□ -1.72
Hmgb1P63158 Gm11819-201ENSMUST00000122192 372 ntBASIC4.28□□□□□ -1.72
Hmgb1P63158 Gm14804-201ENSMUST00000122322 508 ntBASIC4.28□□□□□ -1.72
Hmgb1P63158 Gm11816-201ENSMUST00000142744 353 ntTSL 3 BASIC4.28□□□□□ -1.72
Hmgb1P63158 Gm26393-201ENSMUST00000157625 129 ntBASIC4.28□□□□□ -1.72
Hmgb1P63158 Gm26312-201ENSMUST00000157769 165 ntBASIC4.28□□□□□ -1.72
Hmgb1P63158 Gm9071-201ENSMUST00000165915 474 ntBASIC4.28□□□□□ -1.72
Hmgb1P63158 Mir3106-201ENSMUST00000175401 82 ntBASIC4.28□□□□□ -1.72
Hmgb1P63158 Gm24315-201ENSMUST00000177835 127 ntBASIC4.28□□□□□ -1.72
Hmgb1P63158 Gm26556-201ENSMUST00000180645 320 ntBASIC4.28□□□□□ -1.72
Hmgb1P63158 Gm29429-201ENSMUST00000187071 121 ntBASIC4.28□□□□□ -1.72
Hmgb1P63158 Gm10193-201ENSMUST00000188288 231 ntBASIC4.28□□□□□ -1.72
Hmgb1P63158 4930533P14Rik-201ENSMUST00000189056 583 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Hmgb1P63158 Gm7871-201ENSMUST00000195346 618 ntBASIC4.28□□□□□ -1.72
Hmgb1P63158 Gm4248-201ENSMUST00000196905 316 ntBASIC4.28□□□□□ -1.72
Hmgb1P63158 1700126H18Rik-201ENSMUST00000201903 405 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Hmgb1P63158 Clec2f-202ENSMUST00000204981 657 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Hmgb1P63158 Gm44399-201ENSMUST00000205043 226 ntBASIC4.28□□□□□ -1.72
Hmgb1P63158 Gm44818-201ENSMUST00000206608 358 ntBASIC4.28□□□□□ -1.72
Hmgb1P63158 AC166343.1-201ENSMUST00000213261 577 ntBASIC4.28□□□□□ -1.72
Hmgb1P63158 4930567K20Rik-204ENSMUST00000220270 445 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Hmgb1P63158 4930453C13Rik-201ENSMUST00000222376 765 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Hmgb1P63158 AC124569.4-201ENSMUST00000223830 1220 ntBASIC4.28□□□□□ -1.72
Hmgb1P63158 Mir370-201ENSMUST00000083499 79 ntBASIC4.28□□□□□ -1.72
Hmgb1P63158 Gm11228-201ENSMUST00000143796 2013 ntTSL 1 (best) BASIC4.28□□□□□ -1.73
Hmgb1P63158 Vmn2r-ps45-201ENSMUST00000174138 2435 ntBASIC4.27□□□□□ -1.73
Hmgb1P63158 Gm44525-201ENSMUST00000183129 2634 ntBASIC4.27□□□□□ -1.73
Hmgb1P63158 Gm32014-201ENSMUST00000214779 5145 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Hmgb1P63158 Olfr1033-204ENSMUST00000215682 3625 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Hmgb1P63158 Gm3636-202ENSMUST00000163850 1746 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
Hmgb1P63158 AC164164.1-201ENSMUST00000223245 2340 ntBASIC4.27□□□□□ -1.73
Hmgb1P63158 Rpl30-ps10-201ENSMUST00000117119 347 ntBASIC4.27□□□□□ -1.73
Hmgb1P63158 Gm13268-201ENSMUST00000117485 433 ntBASIC4.27□□□□□ -1.73
Hmgb1P63158 Gm13806-201ENSMUST00000117822 325 ntBASIC4.27□□□□□ -1.73
Hmgb1P63158 Rpl30-ps3-201ENSMUST00000117928 348 ntBASIC4.27□□□□□ -1.73
Hmgb1P63158 Gm12191-201ENSMUST00000118307 348 ntBASIC4.27□□□□□ -1.73
Hmgb1P63158 Gm9703-201ENSMUST00000119573 343 ntBASIC4.27□□□□□ -1.73
Hmgb1P63158 Rpl30-ps11-201ENSMUST00000119630 345 ntBASIC4.27□□□□□ -1.73
Hmgb1P63158 Rpl30-ps1-201ENSMUST00000119767 348 ntBASIC4.27□□□□□ -1.73
Hmgb1P63158 Gm24850-201ENSMUST00000158029 119 ntBASIC4.27□□□□□ -1.73
Hmgb1P63158 Gm22637-201ENSMUST00000158144 283 ntBASIC4.27□□□□□ -1.73
Hmgb1P63158 Gm23068-201ENSMUST00000158239 293 ntBASIC4.27□□□□□ -1.73
Hmgb1P63158 Gm1992-201ENSMUST00000161581 250 ntTSL 3 BASIC4.27□□□□□ -1.73
Hmgb1P63158 Vmn1r77-201ENSMUST00000164446 921 ntAPPRIS P2 BASIC4.27□□□□□ -1.73
Hmgb1P63158 Vmn1r-ps68-201ENSMUST00000174638 399 ntBASIC4.27□□□□□ -1.73
Hmgb1P63158 Mir3090-201ENSMUST00000175597 87 ntBASIC4.27□□□□□ -1.73
Hmgb1P63158 Sumo1-203ENSMUST00000185265 532 ntTSL 3 BASIC4.27□□□□□ -1.73
Hmgb1P63158 Snhg14-207ENSMUST00000188162 770 ntTSL 5 BASIC4.27□□□□□ -1.73
Hmgb1P63158 Gm43582-201ENSMUST00000196149 343 ntBASIC4.27□□□□□ -1.73
Hmgb1P63158 Gm43355-201ENSMUST00000196541 346 ntBASIC4.27□□□□□ -1.73
Hmgb1P63158 Gm43614-201ENSMUST00000197030 517 ntTSL 2 BASIC4.27□□□□□ -1.73
Hmgb1P63158 Gm43402-201ENSMUST00000197159 159 ntBASIC4.27□□□□□ -1.73
Hmgb1P63158 Gm43853-201ENSMUST00000197162 301 ntBASIC4.27□□□□□ -1.73
Hmgb1P63158 Gm18429-201ENSMUST00000198707 421 ntBASIC4.27□□□□□ -1.73
Hmgb1P63158 Ighv1-68-201ENSMUST00000198789 294 ntBASIC4.27□□□□□ -1.73
Hmgb1P63158 Gm7468-201ENSMUST00000203900 652 ntBASIC4.27□□□□□ -1.73
Hmgb1P63158 Gm18462-201ENSMUST00000208112 417 ntBASIC4.27□□□□□ -1.73
Hmgb1P63158 Gm45366-201ENSMUST00000209828 384 ntBASIC4.27□□□□□ -1.73
Hmgb1P63158 Gm45434-201ENSMUST00000210550 293 ntBASIC4.27□□□□□ -1.73
Hmgb1P63158 Olfr848-ps1-201ENSMUST00000212241 930 ntBASIC4.27□□□□□ -1.73
Hmgb1P63158 AC123803.1-201ENSMUST00000216093 189 ntBASIC4.27□□□□□ -1.73
Hmgb1P63158 Gm10088-201ENSMUST00000074116 423 ntBASIC4.27□□□□□ -1.73
Hmgb1P63158 Etd-201ENSMUST00000074232 478 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
Hmgb1P63158 Rpl30-ps8-201ENSMUST00000076166 345 ntBASIC4.27□□□□□ -1.73
Hmgb1P63158 Gm22247-201ENSMUST00000082476 131 ntBASIC4.27□□□□□ -1.73
Hmgb1P63158 Gm10343-201ENSMUST00000096279 348 ntBASIC4.27□□□□□ -1.73
Hmgb1P63158 Arhgef6-202ENSMUST00000114735 1614 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Hmgb1P63158 Gm15127-203ENSMUST00000112753 1950 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
Hmgb1P63158 Btbd35f23-201ENSMUST00000189190 1943 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Hmgb1P63158 Olfr924-202ENSMUST00000217350 3431 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Hmgb1P63158 Igkv5-45-201ENSMUST00000103366 385 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 95.7 ms