Protein–RNA interactions for Protein: P58466

Ctdsp1, Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, mousemouse

Predictions only

Length 261 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdsp1P58466 Gm14624-201ENSMUST00000117746 192 ntBASIC3.2□□□□□ -1.9
Ctdsp1P58466 Gm14852-201ENSMUST00000120065 647 ntBASIC3.2□□□□□ -1.9
Ctdsp1P58466 Gm25909-201ENSMUST00000157619 121 ntBASIC3.2□□□□□ -1.9
Ctdsp1P58466 Gm24507-201ENSMUST00000157683 134 ntBASIC3.2□□□□□ -1.9
Ctdsp1P58466 Gm24959-201ENSMUST00000157924 146 ntBASIC3.2□□□□□ -1.9
Ctdsp1P58466 Gm24853-201ENSMUST00000158026 121 ntBASIC3.2□□□□□ -1.9
Ctdsp1P58466 Gm22668-201ENSMUST00000158716 260 ntBASIC3.2□□□□□ -1.9
Ctdsp1P58466 Gm17148-201ENSMUST00000164702 249 ntBASIC3.2□□□□□ -1.9
Ctdsp1P58466 Rpl9-ps9-201ENSMUST00000173020 573 ntBASIC3.2□□□□□ -1.9
Ctdsp1P58466 Vmn1r-ps86-201ENSMUST00000174052 547 ntBASIC3.2□□□□□ -1.9
Ctdsp1P58466 Mir3060-201ENSMUST00000175339 83 ntBASIC3.2□□□□□ -1.9
Ctdsp1P58466 Mir3572-201ENSMUST00000175549 86 ntBASIC3.2□□□□□ -1.9
Ctdsp1P58466 4930555M17Rik-201ENSMUST00000176666 402 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Ctdsp1P58466 Gm24862-201ENSMUST00000179103 79 ntBASIC3.2□□□□□ -1.9
Ctdsp1P58466 Gm23310-201ENSMUST00000179105 79 ntBASIC3.2□□□□□ -1.9
Ctdsp1P58466 Gm25461-201ENSMUST00000179293 79 ntBASIC3.2□□□□□ -1.9
Ctdsp1P58466 Tmsb15b2-202ENSMUST00000180194 243 ntAPPRIS P1 TSL 3 BASIC3.2□□□□□ -1.9
Ctdsp1P58466 Mir6989-201ENSMUST00000184812 65 ntBASIC3.2□□□□□ -1.9
Ctdsp1P58466 AV026068-203ENSMUST00000185946 668 ntTSL 3 BASIC3.2□□□□□ -1.9
Ctdsp1P58466 Gm8600-201ENSMUST00000186320 905 ntBASIC3.2□□□□□ -1.9
Ctdsp1P58466 Gm28661-201ENSMUST00000188231 681 ntBASIC3.2□□□□□ -1.9
Ctdsp1P58466 Ly6e-215ENSMUST00000191436 1122 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Ctdsp1P58466 Gm42451-201ENSMUST00000197410 244 ntBASIC3.2□□□□□ -1.9
Ctdsp1P58466 Gm38670-201ENSMUST00000199248 77 ntBASIC3.2□□□□□ -1.9
Ctdsp1P58466 Mir691-201ENSMUST00000199719 78 ntBASIC3.2□□□□□ -1.9
Ctdsp1P58466 Olfr428-ps1-201ENSMUST00000201135 466 ntBASIC3.2□□□□□ -1.9
Ctdsp1P58466 Gm44145-201ENSMUST00000203711 172 ntTSL 3 BASIC3.2□□□□□ -1.9
Ctdsp1P58466 B130024G19Rik-205ENSMUST00000207952 485 ntTSL 3 BASIC3.2□□□□□ -1.9
Ctdsp1P58466 Gm38574-201ENSMUST00000211855 640 ntBASIC3.2□□□□□ -1.9
Ctdsp1P58466 Gm45777-201ENSMUST00000213009 301 ntBASIC3.2□□□□□ -1.9
Ctdsp1P58466 AC123832.2-201ENSMUST00000215151 129 ntBASIC3.2□□□□□ -1.9
Ctdsp1P58466 AC159619.1-201ENSMUST00000219118 318 ntTSL 5 BASIC3.2□□□□□ -1.9
Ctdsp1P58466 Gm3338-201ENSMUST00000220982 269 ntBASIC3.2□□□□□ -1.9
Ctdsp1P58466 AC124729.1-201ENSMUST00000225327 976 ntBASIC3.2□□□□□ -1.9
Ctdsp1P58466 AC122393.1-201ENSMUST00000226570 319 ntBASIC3.2□□□□□ -1.9
Ctdsp1P58466 AC154616.2-201ENSMUST00000227978 398 ntBASIC3.2□□□□□ -1.9
Ctdsp1P58466 Gm22304-201ENSMUST00000082688 129 ntBASIC3.2□□□□□ -1.9
Ctdsp1P58466 Olfr1507-203ENSMUST00000206062 2803 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
Ctdsp1P58466 Ogn-201ENSMUST00000021822 2566 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Ctdsp1P58466 Gm43486-201ENSMUST00000196431 4339 ntBASIC3.2□□□□□ -1.9
Ctdsp1P58466 AC154634.4-201ENSMUST00000226077 2665 ntBASIC3.2□□□□□ -1.9
Ctdsp1P58466 D130004A15Rik-201ENSMUST00000201492 1577 ntBASIC3.2□□□□□ -1.9
Ctdsp1P58466 Vmn1r77-204ENSMUST00000228213 8094 ntAPPRIS ALT2 BASIC3.2□□□□□ -1.9
Ctdsp1P58466 Olfr194-202ENSMUST00000213228 3668 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Ctdsp1P58466 Gm20557-201ENSMUST00000192871 2794 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Ctdsp1P58466 Olfr354-202ENSMUST00000217479 9539 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Ctdsp1P58466 Ighv3-5-201ENSMUST00000103479 299 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Ctdsp1P58466 n-R5s52-201ENSMUST00000104614 113 ntBASIC3.19□□□□□ -1.9
Ctdsp1P58466 Gm23226-201ENSMUST00000116927 103 ntBASIC3.19□□□□□ -1.9
Ctdsp1P58466 Gm5757-201ENSMUST00000117494 528 ntBASIC3.19□□□□□ -1.9
Ctdsp1P58466 Gm14628-201ENSMUST00000117508 635 ntBASIC3.19□□□□□ -1.9
Ctdsp1P58466 Gm13228-201ENSMUST00000118937 634 ntBASIC3.19□□□□□ -1.9
Ctdsp1P58466 C030037D09Rik-201ENSMUST00000125967 367 ntTSL 5 BASIC3.19□□□□□ -1.9
Ctdsp1P58466 9030622O22Rik-201ENSMUST00000129082 1245 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Ctdsp1P58466 Gm15949-201ENSMUST00000129485 126 ntTSL 3 BASIC3.19□□□□□ -1.9
Ctdsp1P58466 Gm14011-201ENSMUST00000145178 302 ntTSL 2 BASIC3.19□□□□□ -1.9
Ctdsp1P58466 Gm26278-201ENSMUST00000157098 132 ntBASIC3.19□□□□□ -1.9
Ctdsp1P58466 Gm24343-201ENSMUST00000158708 111 ntBASIC3.19□□□□□ -1.9
Ctdsp1P58466 Gm15914-201ENSMUST00000161922 309 ntBASIC3.19□□□□□ -1.9
Ctdsp1P58466 Gm16289-201ENSMUST00000162079 183 ntBASIC3.19□□□□□ -1.9
Ctdsp1P58466 Gm17416-201ENSMUST00000163724 201 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Ctdsp1P58466 Gm6055-201ENSMUST00000180532 378 ntBASIC3.19□□□□□ -1.9
Ctdsp1P58466 Rpl31-ps24-201ENSMUST00000181350 379 ntBASIC3.19□□□□□ -1.9
Ctdsp1P58466 Mir7220-201ENSMUST00000183978 60 ntBASIC3.19□□□□□ -1.9
Ctdsp1P58466 Gm29322-201ENSMUST00000185378 582 ntTSL 5 BASIC3.19□□□□□ -1.9
Ctdsp1P58466 1810064F22Rik-202ENSMUST00000187399 630 ntTSL 3 BASIC3.19□□□□□ -1.9
Ctdsp1P58466 AV026068-206ENSMUST00000187461 513 ntTSL 2 BASIC3.19□□□□□ -1.9
Ctdsp1P58466 1700015G11Rik-204ENSMUST00000190307 255 ntAPPRIS ALT2 TSL 3 BASIC3.19□□□□□ -1.9
Ctdsp1P58466 Gm38050-201ENSMUST00000191904 238 ntBASIC3.19□□□□□ -1.9
Ctdsp1P58466 Gm6059-201ENSMUST00000196903 340 ntBASIC3.19□□□□□ -1.9
Ctdsp1P58466 Rpl18a-ps3-201ENSMUST00000198938 171 ntBASIC3.19□□□□□ -1.9
Ctdsp1P58466 Gm43472-201ENSMUST00000200175 154 ntBASIC3.19□□□□□ -1.9
Ctdsp1P58466 Gm44336-201ENSMUST00000203696 468 ntBASIC3.19□□□□□ -1.9
Ctdsp1P58466 Olfr1556-ps1-201ENSMUST00000204688 466 ntBASIC3.19□□□□□ -1.9
Ctdsp1P58466 Gm44032-201ENSMUST00000204841 166 ntBASIC3.19□□□□□ -1.9
Ctdsp1P58466 Gm44946-201ENSMUST00000208425 572 ntBASIC3.19□□□□□ -1.9
Ctdsp1P58466 AC102312.1-201ENSMUST00000217752 475 ntTSL 3 BASIC3.19□□□□□ -1.9
Ctdsp1P58466 RMST_1.1-206ENSMUST00000218255 309 ntTSL 3 BASIC3.19□□□□□ -1.9
Ctdsp1P58466 AC127242.4-201ENSMUST00000221242 470 ntBASIC3.19□□□□□ -1.9
Ctdsp1P58466 AC132315.1-201ENSMUST00000221771 390 ntBASIC3.19□□□□□ -1.9
Ctdsp1P58466 Olfr453-201ENSMUST00000053647 954 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Ctdsp1P58466 Gm24948-201ENSMUST00000082866 207 ntBASIC3.19□□□□□ -1.9
Ctdsp1P58466 Mir133b-201ENSMUST00000083546 119 ntBASIC3.19□□□□□ -1.9
Ctdsp1P58466 Olfr575-201ENSMUST00000084812 957 ntBASIC3.19□□□□□ -1.9
Ctdsp1P58466 Rpl31-ps1-201ENSMUST00000085128 378 ntBASIC3.19□□□□□ -1.9
Ctdsp1P58466 Gm4631-201ENSMUST00000109050 1494 ntTSL 5 BASIC3.19□□□□□ -1.9
Ctdsp1P58466 Gm11007-203ENSMUST00000185834 1494 ntTSL 5 BASIC3.19□□□□□ -1.9
Ctdsp1P58466 Gm2007-203ENSMUST00000189494 1494 ntTSL 5 BASIC3.19□□□□□ -1.9
Ctdsp1P58466 Rab27b-203ENSMUST00000121693 6891 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Ctdsp1P58466 Vmn1r80-202ENSMUST00000227205 10892 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Ctdsp1P58466 Olfr1293-ps-203ENSMUST00000217845 3628 ntAPPRIS P5 TSL 5 BASIC3.19□□□□□ -1.9
Ctdsp1P58466 Strbp-201ENSMUST00000028279 16348 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Ctdsp1P58466 Olfr681-204ENSMUST00000215564 4487 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Ctdsp1P58466 Npy6r-201ENSMUST00000042747 2567 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Ctdsp1P58466 Sacs-203ENSMUST00000119943 14991 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
Ctdsp1P58466 Mir687-201ENSMUST00000102166 89 ntBASIC3.18□□□□□ -1.9
Ctdsp1P58466 Ighv3-6-201ENSMUST00000103481 342 ntAPPRIS ALT2 BASIC3.18□□□□□ -1.9
Ctdsp1P58466 Dnajc19-ps-201ENSMUST00000120890 351 ntBASIC3.18□□□□□ -1.9
Ctdsp1P58466 Sult2a-ps4-201ENSMUST00000121421 386 ntBASIC3.18□□□□□ -1.9
Ctdsp1P58466 Gm7840-201ENSMUST00000122086 533 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 94.3 ms