Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Gm22061-201ENSMUST00000082557 107 ntBASIC5.29□□□□□ -1.56
Rfx1P48377 Gm10811-201ENSMUST00000221985 2448 ntBASIC5.29□□□□□ -1.56
Rfx1P48377 Ccr2-201ENSMUST00000055918 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Rfx1P48377 Hnrnpr-207ENSMUST00000148843 21452 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Rfx1P48377 Prrg1-210ENSMUST00000177904 3851 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
Rfx1P48377 Gm36969-201ENSMUST00000194551 2809 ntBASIC5.29□□□□□ -1.56
Rfx1P48377 Dock11-202ENSMUST00000115264 1725 ntTSL 5 BASIC5.28□□□□□ -1.56
Rfx1P48377 4930528J11Rik-201ENSMUST00000201689 3611 ntBASIC5.28□□□□□ -1.56
Rfx1P48377 Nae1-201ENSMUST00000034349 1808 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Rfx1P48377 Kcnt2-203ENSMUST00000120796 3540 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Rfx1P48377 Scgb1b24-201ENSMUST00000108087 279 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Rfx1P48377 Gm12125-201ENSMUST00000117261 736 ntBASIC5.28□□□□□ -1.56
Rfx1P48377 Chrna1os-201ENSMUST00000125413 680 ntTSL 3 BASIC5.28□□□□□ -1.56
Rfx1P48377 Gm25184-201ENSMUST00000157753 163 ntBASIC5.28□□□□□ -1.56
Rfx1P48377 Gm26501-201ENSMUST00000178307 107 ntBASIC5.28□□□□□ -1.56
Rfx1P48377 Gm27165-201ENSMUST00000183951 232 ntBASIC5.28□□□□□ -1.56
Rfx1P48377 Gm27551-201ENSMUST00000184258 77 ntBASIC5.28□□□□□ -1.56
Rfx1P48377 1700027A15Rik-201ENSMUST00000185768 321 ntTSL 5 BASIC5.28□□□□□ -1.56
Rfx1P48377 Gm37586-201ENSMUST00000193654 204 ntBASIC5.28□□□□□ -1.56
Rfx1P48377 Gm44456-201ENSMUST00000196554 89 ntBASIC5.28□□□□□ -1.56
Rfx1P48377 Gm17956-201ENSMUST00000199931 838 ntBASIC5.28□□□□□ -1.56
Rfx1P48377 Gm44419-201ENSMUST00000203338 229 ntBASIC5.28□□□□□ -1.56
Rfx1P48377 Gm45523-201ENSMUST00000210712 799 ntBASIC5.28□□□□□ -1.56
Rfx1P48377 Rps26-ps1-202ENSMUST00000212102 351 ntBASIC5.28□□□□□ -1.56
Rfx1P48377 CAAA01090811.1-201ENSMUST00000216828 277 ntBASIC5.28□□□□□ -1.56
Rfx1P48377 Gm16419-201ENSMUST00000221057 625 ntBASIC5.28□□□□□ -1.56
Rfx1P48377 Gm9318-201ENSMUST00000222444 438 ntBASIC5.28□□□□□ -1.56
Rfx1P48377 AC164437.2-201ENSMUST00000228915 797 ntBASIC5.28□□□□□ -1.56
Rfx1P48377 Gm9772-201ENSMUST00000075018 408 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Rfx1P48377 Gm25411-201ENSMUST00000083760 151 ntBASIC5.28□□□□□ -1.56
Rfx1P48377 Olfr128-202ENSMUST00000216440 3644 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
Rfx1P48377 4932429P05Rik-201ENSMUST00000113958 3093 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Rfx1P48377 Gm37899-201ENSMUST00000193116 8717 ntBASIC5.28□□□□□ -1.56
Rfx1P48377 Gm42986-201ENSMUST00000201618 3385 ntBASIC5.27□□□□□ -1.57
Rfx1P48377 Mga-203ENSMUST00000110773 13577 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
Rfx1P48377 3110080E11Rik-201ENSMUST00000210736 3477 ntBASIC5.27□□□□□ -1.57
Rfx1P48377 4930562D21Rik-201ENSMUST00000123894 1750 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Rfx1P48377 Gm15718-201ENSMUST00000131085 311 ntTSL 3 BASIC5.27□□□□□ -1.57
Rfx1P48377 Gm11376-201ENSMUST00000144541 231 ntTSL 5 BASIC5.27□□□□□ -1.57
Rfx1P48377 Gm8114-201ENSMUST00000172225 484 ntBASIC5.27□□□□□ -1.57
Rfx1P48377 Gm27733-201ENSMUST00000184803 68 ntBASIC5.27□□□□□ -1.57
Rfx1P48377 Gm28257-201ENSMUST00000185244 463 ntBASIC5.27□□□□□ -1.57
Rfx1P48377 Gm28148-201ENSMUST00000186924 697 ntBASIC5.27□□□□□ -1.57
Rfx1P48377 Gm36891-201ENSMUST00000191995 655 ntBASIC5.27□□□□□ -1.57
Rfx1P48377 Gm44474-201ENSMUST00000196525 127 ntBASIC5.27□□□□□ -1.57
Rfx1P48377 Gm18453-201ENSMUST00000208000 626 ntBASIC5.27□□□□□ -1.57
Rfx1P48377 Fth-ps3-201ENSMUST00000210405 358 ntBASIC5.27□□□□□ -1.57
Rfx1P48377 Gm45731-201ENSMUST00000211988 1203 ntBASIC5.27□□□□□ -1.57
Rfx1P48377 AC154374.1-201ENSMUST00000215351 351 ntBASIC5.27□□□□□ -1.57
Rfx1P48377 CAAA01216754.6-201ENSMUST00000217183 398 ntTSL 5 BASIC5.27□□□□□ -1.57
Rfx1P48377 AC124772.1-201ENSMUST00000221325 151 ntBASIC5.27□□□□□ -1.57
Rfx1P48377 AC154552.1-201ENSMUST00000222969 202 ntBASIC5.27□□□□□ -1.57
Rfx1P48377 AL606472.1-201ENSMUST00000224628 275 ntBASIC5.27□□□□□ -1.57
Rfx1P48377 Sprr2i-201ENSMUST00000047264 617 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Rfx1P48377 Gm25793-201ENSMUST00000083287 107 ntBASIC5.27□□□□□ -1.57
Rfx1P48377 Olfr1316-202ENSMUST00000213696 4184 ntAPPRIS ALT1 TSL 5 BASIC5.27□□□□□ -1.57
Rfx1P48377 Arhgef6-201ENSMUST00000033468 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Rfx1P48377 Gm15226-201ENSMUST00000156526 2971 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
Rfx1P48377 Ifi208-202ENSMUST00000169857 1767 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
Rfx1P48377 Cntn6-205ENSMUST00000162872 3467 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
Rfx1P48377 Gm8674-201ENSMUST00000179367 3047 ntBASIC5.26□□□□□ -1.57
Rfx1P48377 Gm20345-201ENSMUST00000175839 2414 ntBASIC5.26□□□□□ -1.57
Rfx1P48377 Olfr1104-203ENSMUST00000215972 2797 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Rfx1P48377 A830011K09Rik-202ENSMUST00000162868 2201 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Rfx1P48377 Mir701-201ENSMUST00000102208 109 ntBASIC5.26□□□□□ -1.57
Rfx1P48377 Gm22498-201ENSMUST00000104497 86 ntBASIC5.26□□□□□ -1.57
Rfx1P48377 Gm13122-201ENSMUST00000118380 453 ntBASIC5.26□□□□□ -1.57
Rfx1P48377 Gm13213-201ENSMUST00000119668 474 ntBASIC5.26□□□□□ -1.57
Rfx1P48377 Gm11384-201ENSMUST00000121376 303 ntBASIC5.26□□□□□ -1.57
Rfx1P48377 Dnal1-203ENSMUST00000136159 403 ntTSL 5 BASIC5.26□□□□□ -1.57
Rfx1P48377 Gm23781-201ENSMUST00000157940 308 ntBASIC5.26□□□□□ -1.57
Rfx1P48377 Gm9830-201ENSMUST00000178509 357 ntBASIC5.26□□□□□ -1.57
Rfx1P48377 Cox6b2-208ENSMUST00000183971 401 ntTSL 5 BASIC5.26□□□□□ -1.57
Rfx1P48377 Gm27952-201ENSMUST00000184748 105 ntBASIC5.26□□□□□ -1.57
Rfx1P48377 Ighv1-32-201ENSMUST00000195149 351 ntBASIC5.26□□□□□ -1.57
Rfx1P48377 Fxyd1-210ENSMUST00000206012 501 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Rfx1P48377 Vmn2r-ps50-201ENSMUST00000209317 120 ntBASIC5.26□□□□□ -1.57
Rfx1P48377 Gm45392-201ENSMUST00000210441 214 ntBASIC5.26□□□□□ -1.57
Rfx1P48377 AC129541.1-201ENSMUST00000226940 523 ntBASIC5.26□□□□□ -1.57
Rfx1P48377 Dynap-201ENSMUST00000025390 1227 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Rfx1P48377 Fabp9-201ENSMUST00000029038 583 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Rfx1P48377 Gm26447-201ENSMUST00000082448 129 ntBASIC5.26□□□□□ -1.57
Rfx1P48377 Gm23510-201ENSMUST00000083083 163 ntBASIC5.26□□□□□ -1.57
Rfx1P48377 Mir504-201ENSMUST00000093602 79 ntBASIC5.26□□□□□ -1.57
Rfx1P48377 BC100530-201ENSMUST00000096089 619 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Rfx1P48377 Olfr1094-202ENSMUST00000217509 1693 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Rfx1P48377 Gm35191-201ENSMUST00000200925 2475 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Rfx1P48377 Olfr1043-203ENSMUST00000213949 1778 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Rfx1P48377 Vmn1r171-203ENSMUST00000226321 3067 ntAPPRIS ALT2 BASIC5.26□□□□□ -1.57
Rfx1P48377 Gm8300-201ENSMUST00000110152 1873 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Rfx1P48377 B3galt1-202ENSMUST00000112346 4977 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Rfx1P48377 AL589737.1-201ENSMUST00000221163 2763 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Rfx1P48377 Gm4631-202ENSMUST00000121393 4402 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
Rfx1P48377 Olfr575-202ENSMUST00000213477 3512 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Rfx1P48377 Olfr744-203ENSMUST00000216690 1765 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Rfx1P48377 Olfr716-207ENSMUST00000216871 4062 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Rfx1P48377 Mir687-201ENSMUST00000102166 89 ntBASIC5.25□□□□□ -1.57
Rfx1P48377 Igkv6-32-201ENSMUST00000103377 366 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
Rfx1P48377 Hbb-bh2-201ENSMUST00000106866 558 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Rfx1P48377 Gm16242-201ENSMUST00000117741 334 ntBASIC5.25□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 103.1 ms