Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Gm14655-201ENSMUST00000120124 578 ntBASIC1.9□□□□□ -2.11
HttP42859 Gm15900-201ENSMUST00000161584 342 ntBASIC1.9□□□□□ -2.11
HttP42859 AC157654.1-201ENSMUST00000224130 820 ntBASIC1.9□□□□□ -2.11
HttP42859 Gm25124-201ENSMUST00000083345 164 ntBASIC1.9□□□□□ -2.11
HttP42859 Vmn1r172-202ENSMUST00000173101 9109 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
HttP42859 Olfr794-202ENSMUST00000204820 3044 ntAPPRIS P1 TSL 2 BASIC1.89□□□□□ -2.11
HttP42859 Gm15087-201ENSMUST00000117465 1172 ntBASIC1.89□□□□□ -2.11
HttP42859 Gm27544-201ENSMUST00000185069 155 ntBASIC1.89□□□□□ -2.11
HttP42859 Gm43967-201ENSMUST00000203787 301 ntBASIC1.89□□□□□ -2.11
HttP42859 AC154506.1-201ENSMUST00000225178 621 ntBASIC1.89□□□□□ -2.11
HttP42859 Olfr788-202ENSMUST00000213222 4747 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
HttP42859 Gm14404-201ENSMUST00000119117 1660 ntBASIC1.89□□□□□ -2.11
HttP42859 Gm45393-201ENSMUST00000211634 2631 ntBASIC1.89□□□□□ -2.11
HttP42859 Gm24048-201ENSMUST00000102411 106 ntBASIC1.89□□□□□ -2.11
HttP42859 Gm28745-201ENSMUST00000190069 305 ntBASIC1.89□□□□□ -2.11
HttP42859 Olfr840-ps1-201ENSMUST00000211827 917 ntBASIC1.89□□□□□ -2.11
HttP42859 2010106E10Rik-201ENSMUST00000026602 1257 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
HttP42859 Stap1-201ENSMUST00000031171 909 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
HttP42859 Mir221-201ENSMUST00000083488 95 ntBASIC1.89□□□□□ -2.11
HttP42859 Zfp160-201ENSMUST00000088811 3791 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
HttP42859 Gm22486-201ENSMUST00000116815 137 ntBASIC1.88□□□□□ -2.11
HttP42859 Gm13487-201ENSMUST00000122240 864 ntBASIC1.88□□□□□ -2.11
HttP42859 Ear-ps3-201ENSMUST00000168308 445 ntBASIC1.88□□□□□ -2.11
HttP42859 Gm42439-201ENSMUST00000195931 486 ntTSL 3 BASIC1.88□□□□□ -2.11
HttP42859 AC134601.3-201ENSMUST00000221682 154 ntBASIC1.88□□□□□ -2.11
HttP42859 CT025525.2-201ENSMUST00000227743 423 ntBASIC1.88□□□□□ -2.11
HttP42859 Igkv13-84-201ENSMUST00000103339 347 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
HttP42859 Igkv13-85-201ENSMUST00000114212 347 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
HttP42859 Cyp3a25-202ENSMUST00000138870 513 ntTSL 3 BASIC1.88□□□□□ -2.11
HttP42859 Gm23642-201ENSMUST00000157858 258 ntBASIC1.88□□□□□ -2.11
HttP42859 AC166323.1-201ENSMUST00000217756 367 ntBASIC1.88□□□□□ -2.11
HttP42859 Ifnk-201ENSMUST00000058595 805 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
HttP42859 Olfr1201-203ENSMUST00000216213 2602 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
HttP42859 Olfr805-203ENSMUST00000216794 3199 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
HttP42859 Gm11268-201ENSMUST00000118347 267 ntBASIC1.88□□□□□ -2.11
HttP42859 Gm13656-201ENSMUST00000123829 345 ntTSL 3 BASIC1.88□□□□□ -2.11
HttP42859 Klra17-201ENSMUST00000014687 1190 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
HttP42859 Scgb2b12-201ENSMUST00000183195 511 ntAPPRIS P1 TSL 2 BASIC1.88□□□□□ -2.11
HttP42859 Olfr867-201ENSMUST00000060780 996 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
HttP42859 Gm5471-201ENSMUST00000072732 337 ntBASIC1.88□□□□□ -2.11
HttP42859 Mir10b-201ENSMUST00000083566 68 ntBASIC1.88□□□□□ -2.11
HttP42859 Gm26176-201ENSMUST00000083795 105 ntBASIC1.88□□□□□ -2.11
HttP42859 Olfr1317-203ENSMUST00000214801 2578 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
HttP42859 Snord71-201ENSMUST00000104361 85 ntBASIC1.87□□□□□ -2.11
HttP42859 Gm37629-201ENSMUST00000193635 1050 ntBASIC1.87□□□□□ -2.11
HttP42859 AL450317.1-201ENSMUST00000213941 291 ntBASIC1.87□□□□□ -2.11
HttP42859 Olfr1313-203ENSMUST00000216071 2599 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
HttP42859 Olfr1037-203ENSMUST00000216020 1359 ntAPPRIS P1 TSL 3 BASIC1.87□□□□□ -2.11
HttP42859 Sult1b1-201ENSMUST00000031199 2604 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
HttP42859 Gm14229-201ENSMUST00000121178 850 ntBASIC1.87□□□□□ -2.11
HttP42859 Gm23328-201ENSMUST00000157418 132 ntBASIC1.87□□□□□ -2.11
HttP42859 Spanxn4-201ENSMUST00000172433 424 ntBASIC1.87□□□□□ -2.11
HttP42859 Spin2-ps6-201ENSMUST00000178459 525 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
HttP42859 Gm42526-201ENSMUST00000198956 393 ntBASIC1.87□□□□□ -2.11
HttP42859 Olfr1309-205ENSMUST00000216948 5168 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
HttP42859 Olfr728-202ENSMUST00000213685 7087 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
HttP42859 Gm23329-201ENSMUST00000157415 108 ntBASIC1.86□□□□□ -2.11
HttP42859 Gm43415-201ENSMUST00000201934 750 ntBASIC1.86□□□□□ -2.11
HttP42859 Gm8679-201ENSMUST00000210651 1036 ntBASIC1.86□□□□□ -2.11
HttP42859 Gm22866-201ENSMUST00000083947 177 ntBASIC1.86□□□□□ -2.11
HttP42859 Olfr629-202ENSMUST00000213906 2548 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
HttP42859 5730408A14Rik-201ENSMUST00000194955 1824 ntBASIC1.86□□□□□ -2.11
HttP42859 Gm3940-201ENSMUST00000105087 432 ntBASIC1.86□□□□□ -2.11
HttP42859 Gm7421-201ENSMUST00000119298 639 ntBASIC1.86□□□□□ -2.11
HttP42859 Gm7365-201ENSMUST00000120877 639 ntBASIC1.86□□□□□ -2.11
HttP42859 Gm23760-201ENSMUST00000158350 116 ntBASIC1.86□□□□□ -2.11
HttP42859 Gm37228-201ENSMUST00000193574 331 ntTSL 5 BASIC1.86□□□□□ -2.11
HttP42859 Gm44548-201ENSMUST00000208929 192 ntBASIC1.86□□□□□ -2.11
HttP42859 Mir320-201ENSMUST00000083594 82 ntBASIC1.86□□□□□ -2.11
HttP42859 Gm14579-201ENSMUST00000117068 283 ntBASIC1.86□□□□□ -2.11
HttP42859 D730003K21Rik-201ENSMUST00000215052 589 ntTSL 2 BASIC1.86□□□□□ -2.11
HttP42859 Spata31-201ENSMUST00000070216 3232 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
HttP42859 Gm7195-201ENSMUST00000190869 1707 ntBASIC1.85□□□□□ -2.11
HttP42859 Gm29242-201ENSMUST00000186570 457 ntTSL 5 BASIC1.85□□□□□ -2.11
HttP42859 Gm32877-201ENSMUST00000197419 709 ntTSL 5 BASIC1.85□□□□□ -2.11
HttP42859 AC113031.4-201ENSMUST00000228381 514 ntBASIC1.85□□□□□ -2.11
HttP42859 F8-201ENSMUST00000033539 9784 ntAPPRIS P3 TSL 1 (best) BASIC1.85□□□□□ -2.11
HttP42859 Olfr955-203ENSMUST00000220176 1452 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
HttP42859 Gm7489-201ENSMUST00000100666 1222 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
HttP42859 Gm25945-201ENSMUST00000122484 135 ntBASIC1.85□□□□□ -2.11
HttP42859 AC139350.4-201ENSMUST00000228483 798 ntBASIC1.85□□□□□ -2.11
HttP42859 Gm3081-201ENSMUST00000193413 3025 ntBASIC1.85□□□□□ -2.11
HttP42859 Gm15115-201ENSMUST00000121145 264 ntBASIC1.84□□□□□ -2.11
HttP42859 Gm22340-201ENSMUST00000157717 114 ntBASIC1.84□□□□□ -2.11
HttP42859 Gm26621-201ENSMUST00000180413 700 ntTSL 2 BASIC1.84□□□□□ -2.11
HttP42859 Gm27608-201ENSMUST00000184822 162 ntBASIC1.84□□□□□ -2.11
HttP42859 Gm19641-201ENSMUST00000188432 417 ntBASIC1.84□□□□□ -2.11
HttP42859 AL513022.1-201ENSMUST00000220489 504 ntTSL 5 BASIC1.84□□□□□ -2.11
HttP42859 CT571256.1-201ENSMUST00000226045 585 ntBASIC1.84□□□□□ -2.11
HttP42859 Defb37-201ENSMUST00000066282 352 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
HttP42859 Olfr711-203ENSMUST00000216335 4724 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
HttP42859 Oog2-201ENSMUST00000080405 1917 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
HttP42859 Ssxb6-201ENSMUST00000138642 518 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
HttP42859 Gm14469-201ENSMUST00000118363 202 ntBASIC1.84□□□□□ -2.12
HttP42859 Gm13595-201ENSMUST00000145994 494 ntTSL 3 BASIC1.84□□□□□ -2.12
HttP42859 Mir8103-201ENSMUST00000183945 107 ntBASIC1.84□□□□□ -2.12
HttP42859 Gm27979-201ENSMUST00000185126 56 ntBASIC1.84□□□□□ -2.12
HttP42859 AC124729.1-202ENSMUST00000225587 938 ntBASIC1.84□□□□□ -2.12
HttP42859 Olfr1355-201ENSMUST00000078414 3317 ntAPPRIS P1 TSL 2 BASIC1.83□□□□□ -2.12
HttP42859 Gm23336-201ENSMUST00000117023 123 ntBASIC1.83□□□□□ -2.12
Retrieved 100 of 76,532 protein–RNA pairs in 83 ms