Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Gm26297-201ENSMUST00000179464 132 ntBASIC3.66□□□□□ -1.82
Traf1P39428 Gm3681-201ENSMUST00000179940 639 ntBASIC3.66□□□□□ -1.82
Traf1P39428 Gm23648-201ENSMUST00000180301 107 ntBASIC3.66□□□□□ -1.82
Traf1P39428 Gm27893-201ENSMUST00000184408 194 ntBASIC3.66□□□□□ -1.82
Traf1P39428 Mir8096-201ENSMUST00000184526 127 ntBASIC3.66□□□□□ -1.82
Traf1P39428 Mir6993-201ENSMUST00000184912 65 ntBASIC3.66□□□□□ -1.82
Traf1P39428 Gm27249-201ENSMUST00000185049 328 ntBASIC3.66□□□□□ -1.82
Traf1P39428 Gm29602-201ENSMUST00000186887 442 ntBASIC3.66□□□□□ -1.82
Traf1P39428 Gm29013-201ENSMUST00000187431 237 ntBASIC3.66□□□□□ -1.82
Traf1P39428 Gm29051-201ENSMUST00000190184 369 ntTSL 5 BASIC3.66□□□□□ -1.82
Traf1P39428 Gm37751-201ENSMUST00000192440 1198 ntBASIC3.66□□□□□ -1.82
Traf1P39428 Gm37062-201ENSMUST00000195028 701 ntTSL 5 BASIC3.66□□□□□ -1.82
Traf1P39428 Gm44254-201ENSMUST00000204184 322 ntBASIC3.66□□□□□ -1.82
Traf1P39428 Gm34838-201ENSMUST00000209231 958 ntTSL 5 BASIC3.66□□□□□ -1.82
Traf1P39428 Olfr908-201ENSMUST00000215139 932 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Traf1P39428 1700015C15Rik-201ENSMUST00000221465 374 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Traf1P39428 Spag11b-201ENSMUST00000039075 342 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Traf1P39428 Gm23506-201ENSMUST00000083077 107 ntBASIC3.66□□□□□ -1.82
Traf1P39428 Gm22970-201ENSMUST00000083304 186 ntBASIC3.66□□□□□ -1.82
Traf1P39428 Olfr597-202ENSMUST00000216456 2727 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Traf1P39428 Gm42675-201ENSMUST00000197552 4035 ntBASIC3.66□□□□□ -1.82
Traf1P39428 Nexn-211ENSMUST00000199423 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
Traf1P39428 4932412D23Rik-203ENSMUST00000142270 4105 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Traf1P39428 Arhgef6-202ENSMUST00000114735 1614 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Traf1P39428 Vmn1r219-204ENSMUST00000228113 5639 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Traf1P39428 Olfr352-202ENSMUST00000217325 3337 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
Traf1P39428 Gm10488-201ENSMUST00000101657 874 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
Traf1P39428 Gm5483-201ENSMUST00000114858 414 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
Traf1P39428 Gm9009-201ENSMUST00000117321 326 ntBASIC3.65□□□□□ -1.83
Traf1P39428 Gm13751-201ENSMUST00000120280 752 ntBASIC3.65□□□□□ -1.83
Traf1P39428 Vmn1r-ps106-201ENSMUST00000120587 824 ntBASIC3.65□□□□□ -1.83
Traf1P39428 Gm11430-201ENSMUST00000121317 217 ntBASIC3.65□□□□□ -1.83
Traf1P39428 Gm13184-201ENSMUST00000149932 626 ntTSL 3 BASIC3.65□□□□□ -1.83
Traf1P39428 Gm13775-201ENSMUST00000153865 751 ntTSL 3 BASIC3.65□□□□□ -1.83
Traf1P39428 Gm24534-201ENSMUST00000157949 291 ntBASIC3.65□□□□□ -1.83
Traf1P39428 Gm3298-201ENSMUST00000165289 516 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
Traf1P39428 Gm17085-201ENSMUST00000165425 502 ntBASIC3.65□□□□□ -1.83
Traf1P39428 Gm8206-202ENSMUST00000168733 516 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
Traf1P39428 Gm4540-201ENSMUST00000170669 429 ntBASIC3.65□□□□□ -1.83
Traf1P39428 Obox1-203ENSMUST00000172881 821 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
Traf1P39428 Mir6383-201ENSMUST00000184545 116 ntBASIC3.65□□□□□ -1.83
Traf1P39428 1810022K09Rik-203ENSMUST00000185423 278 ntTSL 3 BASIC3.65□□□□□ -1.83
Traf1P39428 Gm18433-202ENSMUST00000195682 196 ntBASIC3.65□□□□□ -1.83
Traf1P39428 Igkv13-71-1-201ENSMUST00000199934 264 ntBASIC3.65□□□□□ -1.83
Traf1P39428 Eif4e-205ENSMUST00000200100 729 ntTSL 3 BASIC3.65□□□□□ -1.83
Traf1P39428 Olfr468-ps1-201ENSMUST00000207203 593 ntBASIC3.65□□□□□ -1.83
Traf1P39428 Olfr837-201ENSMUST00000212482 1040 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Traf1P39428 AC140785.1-201ENSMUST00000217782 383 ntBASIC3.65□□□□□ -1.83
Traf1P39428 Olfr1324-203ENSMUST00000219631 1152 ntAPPRIS P2 BASIC3.65□□□□□ -1.83
Traf1P39428 Gm9370-201ENSMUST00000222787 609 ntBASIC3.65□□□□□ -1.83
Traf1P39428 AC153646.1-201ENSMUST00000223229 1279 ntBASIC3.65□□□□□ -1.83
Traf1P39428 AC154252.1-201ENSMUST00000226041 473 ntBASIC3.65□□□□□ -1.83
Traf1P39428 Olfr1324-201ENSMUST00000050044 1152 ntAPPRIS ALT2 BASIC3.65□□□□□ -1.83
Traf1P39428 Olfr914-201ENSMUST00000057755 951 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Traf1P39428 Gm25582-201ENSMUST00000083412 110 ntBASIC3.65□□□□□ -1.83
Traf1P39428 Mir16-2-201ENSMUST00000083672 95 ntBASIC3.65□□□□□ -1.83
Traf1P39428 Gm45662-201ENSMUST00000210054 2098 ntBASIC3.65□□□□□ -1.83
Traf1P39428 Gm42801-201ENSMUST00000202562 2865 ntBASIC3.65□□□□□ -1.83
Traf1P39428 AC152159.1-201ENSMUST00000226719 2769 ntBASIC3.65□□□□□ -1.83
Traf1P39428 Mctp1-202ENSMUST00000109589 1653 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
Traf1P39428 Mgat4c-201ENSMUST00000020039 3735 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
Traf1P39428 Olfr1245-202ENSMUST00000217402 2610 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Traf1P39428 Vmn1r211-202ENSMUST00000228645 5447 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Traf1P39428 Gm25107-201ENSMUST00000122472 129 ntBASIC3.64□□□□□ -1.83
Traf1P39428 Gm12478-201ENSMUST00000127709 353 ntTSL 5 BASIC3.64□□□□□ -1.83
Traf1P39428 1700016C15Rik-201ENSMUST00000016106 768 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Traf1P39428 Gm3221-201ENSMUST00000164869 440 ntBASIC3.64□□□□□ -1.83
Traf1P39428 Trav7-3-201ENSMUST00000177622 402 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Traf1P39428 Trav7d-3-201ENSMUST00000179789 402 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Traf1P39428 Gm27783-201ENSMUST00000183534 105 ntBASIC3.64□□□□□ -1.83
Traf1P39428 Mir6372-201ENSMUST00000185114 109 ntBASIC3.64□□□□□ -1.83
Traf1P39428 Ighv1-41-201ENSMUST00000194414 329 ntBASIC3.64□□□□□ -1.83
Traf1P39428 Igkv2-105-201ENSMUST00000196931 377 ntBASIC3.64□□□□□ -1.83
Traf1P39428 Ranbp2-ps12-201ENSMUST00000197110 386 ntBASIC3.64□□□□□ -1.83
Traf1P39428 Gm43746-201ENSMUST00000200028 317 ntBASIC3.64□□□□□ -1.83
Traf1P39428 Gm25203-202ENSMUST00000200458 216 ntBASIC3.64□□□□□ -1.83
Traf1P39428 Gm45400-201ENSMUST00000211603 653 ntBASIC3.64□□□□□ -1.83
Traf1P39428 Nat1-202ENSMUST00000212171 1208 ntAPPRIS ALT1 TSL 5 BASIC3.64□□□□□ -1.83
Traf1P39428 Gm39388-201ENSMUST00000214502 1041 ntTSL 5 BASIC3.64□□□□□ -1.83
Traf1P39428 Gm46146-201ENSMUST00000217483 346 ntBASIC3.64□□□□□ -1.83
Traf1P39428 Gm19563-201ENSMUST00000222031 270 ntBASIC3.64□□□□□ -1.83
Traf1P39428 AC133498.1-206ENSMUST00000223254 385 ntTSL 5 BASIC3.64□□□□□ -1.83
Traf1P39428 AC154515.2-201ENSMUST00000226093 406 ntBASIC3.64□□□□□ -1.83
Traf1P39428 Gm23615-201ENSMUST00000082602 65 ntBASIC3.64□□□□□ -1.83
Traf1P39428 Gm22507-201ENSMUST00000082773 160 ntBASIC3.64□□□□□ -1.83
Traf1P39428 Gm25203-201ENSMUST00000082842 215 ntBASIC3.64□□□□□ -1.83
Traf1P39428 Gm16261-201ENSMUST00000096813 205 ntBASIC3.64□□□□□ -1.83
Traf1P39428 Olfr17-202ENSMUST00000210568 3666 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Traf1P39428 Olfr299-202ENSMUST00000217253 4479 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Traf1P39428 Vmn2r78-201ENSMUST00000170835 2611 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Traf1P39428 Gm9696-201ENSMUST00000094227 3050 ntTSL 2 BASIC3.64□□□□□ -1.83
Traf1P39428 Macc1-203ENSMUST00000221917 4272 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Traf1P39428 Olfr509-203ENSMUST00000214861 3535 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Traf1P39428 Olfr1039-202ENSMUST00000214364 3925 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
Traf1P39428 Olfr913-201ENSMUST00000081095 2441 ntAPPRIS P1 TSL 3 BASIC3.63□□□□□ -1.83
Traf1P39428 Gm43665-201ENSMUST00000198672 1659 ntBASIC3.63□□□□□ -1.83
Traf1P39428 Olfr968-202ENSMUST00000216458 4630 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
Traf1P39428 Gm5935-201ENSMUST00000101667 875 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
Traf1P39428 Gm12891-201ENSMUST00000119358 240 ntBASIC3.63□□□□□ -1.83
Traf1P39428 Mup-ps10-201ENSMUST00000119626 556 ntBASIC3.63□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 96.1 ms