Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 Gm10964-201ENSMUST00000106852 120 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
RaraP11416 Gm11698-201ENSMUST00000117948 455 ntBASIC4.95□□□□□ -1.62
RaraP11416 Gm14656-201ENSMUST00000120342 502 ntBASIC4.95□□□□□ -1.62
RaraP11416 Gm13903-201ENSMUST00000120945 193 ntBASIC4.95□□□□□ -1.62
RaraP11416 Gm5958-201ENSMUST00000147698 297 ntBASIC4.95□□□□□ -1.62
RaraP11416 Gm25425-201ENSMUST00000157611 96 ntBASIC4.95□□□□□ -1.62
RaraP11416 Gm16545-201ENSMUST00000161968 463 ntBASIC4.95□□□□□ -1.62
RaraP11416 Mir6346-201ENSMUST00000183982 81 ntBASIC4.95□□□□□ -1.62
RaraP11416 Gm28263-201ENSMUST00000185884 400 ntBASIC4.95□□□□□ -1.62
RaraP11416 Gm6651-201ENSMUST00000189471 271 ntBASIC4.95□□□□□ -1.62
RaraP11416 Scgb3a2-203ENSMUST00000189750 578 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
RaraP11416 Gm29014-201ENSMUST00000191422 326 ntBASIC4.95□□□□□ -1.62
RaraP11416 Gm37167-201ENSMUST00000194946 396 ntBASIC4.95□□□□□ -1.62
RaraP11416 Fxyd1-210ENSMUST00000206012 501 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
RaraP11416 Gm46194-201ENSMUST00000218136 320 ntBASIC4.95□□□□□ -1.62
RaraP11416 Snord15b-201ENSMUST00000083032 145 ntBASIC4.95□□□□□ -1.62
RaraP11416 Nxf2-203ENSMUST00000113189 2375 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
RaraP11416 Olfr1270-205ENSMUST00000216354 4836 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
RaraP11416 Gm8402-201ENSMUST00000118183 1770 ntBASIC4.95□□□□□ -1.62
RaraP11416 Gm8383-201ENSMUST00000121179 1770 ntBASIC4.95□□□□□ -1.62
RaraP11416 Olfr784-202ENSMUST00000214064 3119 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
RaraP11416 Gm44821-201ENSMUST00000208212 2002 ntBASIC4.95□□□□□ -1.62
RaraP11416 Gm17976-201ENSMUST00000184037 1909 ntBASIC4.95□□□□□ -1.62
RaraP11416 Zfp715-202ENSMUST00000048015 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
RaraP11416 Gm5615-201ENSMUST00000098900 2348 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
RaraP11416 Ago2-201ENSMUST00000044113 13705 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
RaraP11416 Hm629797-201ENSMUST00000183645 2398 ntBASIC4.94□□□□□ -1.62
RaraP11416 Vmn1r1-203ENSMUST00000227629 3654 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
RaraP11416 Huwe1-202ENSMUST00000112622 14168 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
RaraP11416 Erbin-204ENSMUST00000169083 5435 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
RaraP11416 Cfhr1-201ENSMUST00000023965 1793 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
RaraP11416 Gm37764-201ENSMUST00000194664 2150 ntBASIC4.94□□□□□ -1.62
RaraP11416 Gm45324-201ENSMUST00000211193 5638 ntBASIC4.94□□□□□ -1.62
RaraP11416 Usp9x-201ENSMUST00000089302 11887 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
RaraP11416 Vmn1r169-202ENSMUST00000226669 2326 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
RaraP11416 Akap4-201ENSMUST00000057101 2851 ntAPPRIS P4 TSL 1 (best) BASIC4.94□□□□□ -1.62
RaraP11416 Gm37329-201ENSMUST00000192973 2057 ntBASIC4.94□□□□□ -1.62
RaraP11416 n-R5s67-201ENSMUST00000104336 114 ntBASIC4.94□□□□□ -1.62
RaraP11416 Gm24855-201ENSMUST00000104848 97 ntBASIC4.94□□□□□ -1.62
RaraP11416 Cypt15-201ENSMUST00000115114 519 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
RaraP11416 Rpl30-ps5-201ENSMUST00000117104 361 ntBASIC4.94□□□□□ -1.62
RaraP11416 Gm11429-201ENSMUST00000119089 144 ntBASIC4.94□□□□□ -1.62
RaraP11416 Gm13213-201ENSMUST00000119668 474 ntBASIC4.94□□□□□ -1.62
RaraP11416 Gm12808-201ENSMUST00000120597 404 ntBASIC4.94□□□□□ -1.62
RaraP11416 Gm5379-201ENSMUST00000120973 826 ntBASIC4.94□□□□□ -1.62
RaraP11416 Gm24596-201ENSMUST00000122504 107 ntBASIC4.94□□□□□ -1.62
RaraP11416 A630023P12Rik-204ENSMUST00000142879 524 ntTSL 3 BASIC4.94□□□□□ -1.62
RaraP11416 4930406D18Rik-202ENSMUST00000152827 657 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
RaraP11416 Gm23137-201ENSMUST00000157559 107 ntBASIC4.94□□□□□ -1.62
RaraP11416 Gm24751-201ENSMUST00000157844 102 ntBASIC4.94□□□□□ -1.62
RaraP11416 Gm5168-202ENSMUST00000168002 636 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
RaraP11416 Gm25211-201ENSMUST00000177553 107 ntBASIC4.94□□□□□ -1.62
RaraP11416 Gm24540-201ENSMUST00000177627 107 ntBASIC4.94□□□□□ -1.62
RaraP11416 Gm25256-201ENSMUST00000177746 107 ntBASIC4.94□□□□□ -1.62
RaraP11416 Gm22822-201ENSMUST00000177941 107 ntBASIC4.94□□□□□ -1.62
RaraP11416 Rnu6-201ENSMUST00000178023 107 ntBASIC4.94□□□□□ -1.62
RaraP11416 Gm23151-201ENSMUST00000178061 107 ntBASIC4.94□□□□□ -1.62
RaraP11416 Gm23402-201ENSMUST00000178130 107 ntBASIC4.94□□□□□ -1.62
RaraP11416 Gm25245-201ENSMUST00000178139 107 ntBASIC4.94□□□□□ -1.62
RaraP11416 Gm24753-201ENSMUST00000178183 107 ntBASIC4.94□□□□□ -1.62
RaraP11416 Gm25829-201ENSMUST00000178275 107 ntBASIC4.94□□□□□ -1.62
RaraP11416 Gm22092-201ENSMUST00000178290 107 ntBASIC4.94□□□□□ -1.62
RaraP11416 Gm24486-201ENSMUST00000178420 107 ntBASIC4.94□□□□□ -1.62
RaraP11416 Gm23217-201ENSMUST00000178482 107 ntBASIC4.94□□□□□ -1.62
RaraP11416 Gm26245-201ENSMUST00000178491 107 ntBASIC4.94□□□□□ -1.62
RaraP11416 Gm24019-201ENSMUST00000178620 107 ntBASIC4.94□□□□□ -1.62
RaraP11416 Gm23610-201ENSMUST00000178659 107 ntBASIC4.94□□□□□ -1.62
RaraP11416 Gm23092-201ENSMUST00000178688 107 ntBASIC4.94□□□□□ -1.62
RaraP11416 Gm25709-201ENSMUST00000178844 107 ntBASIC4.94□□□□□ -1.62
RaraP11416 Gm25547-201ENSMUST00000178877 107 ntBASIC4.94□□□□□ -1.62
RaraP11416 Gm5558-201ENSMUST00000178933 495 ntBASIC4.94□□□□□ -1.62
RaraP11416 Gm25312-201ENSMUST00000178972 107 ntBASIC4.94□□□□□ -1.62
RaraP11416 Gm24722-201ENSMUST00000179017 107 ntBASIC4.94□□□□□ -1.62
RaraP11416 Gm22969-201ENSMUST00000179018 107 ntBASIC4.94□□□□□ -1.62
RaraP11416 Gm25101-201ENSMUST00000179057 107 ntBASIC4.94□□□□□ -1.62
RaraP11416 Gm26378-201ENSMUST00000179093 107 ntBASIC4.94□□□□□ -1.62
RaraP11416 Gm24873-201ENSMUST00000179101 107 ntBASIC4.94□□□□□ -1.62
RaraP11416 Gm23934-201ENSMUST00000179111 107 ntBASIC4.94□□□□□ -1.62
RaraP11416 Gm22623-201ENSMUST00000179244 107 ntBASIC4.94□□□□□ -1.62
RaraP11416 Gm26243-201ENSMUST00000179260 107 ntBASIC4.94□□□□□ -1.62
RaraP11416 Gm25737-201ENSMUST00000179274 107 ntBASIC4.94□□□□□ -1.62
RaraP11416 Gm22618-201ENSMUST00000179376 107 ntBASIC4.94□□□□□ -1.62
RaraP11416 Gm24182-201ENSMUST00000179419 107 ntBASIC4.94□□□□□ -1.62
RaraP11416 Gm24242-201ENSMUST00000179440 107 ntBASIC4.94□□□□□ -1.62
RaraP11416 Gm25064-201ENSMUST00000179535 107 ntBASIC4.94□□□□□ -1.62
RaraP11416 Gm26295-201ENSMUST00000179690 107 ntBASIC4.94□□□□□ -1.62
RaraP11416 Gm23712-201ENSMUST00000179713 107 ntBASIC4.94□□□□□ -1.62
RaraP11416 Gm22823-201ENSMUST00000179754 107 ntBASIC4.94□□□□□ -1.62
RaraP11416 Gm22360-201ENSMUST00000179775 107 ntBASIC4.94□□□□□ -1.62
RaraP11416 Gm24978-201ENSMUST00000179782 107 ntBASIC4.94□□□□□ -1.62
RaraP11416 Gm24967-201ENSMUST00000179791 107 ntBASIC4.94□□□□□ -1.62
RaraP11416 Gm25173-201ENSMUST00000179794 107 ntBASIC4.94□□□□□ -1.62
RaraP11416 Gm24870-201ENSMUST00000179897 107 ntBASIC4.94□□□□□ -1.62
RaraP11416 Gm22288-201ENSMUST00000179904 107 ntBASIC4.94□□□□□ -1.62
RaraP11416 Gm22645-201ENSMUST00000180010 107 ntBASIC4.94□□□□□ -1.62
RaraP11416 Gm24565-201ENSMUST00000180099 107 ntBASIC4.94□□□□□ -1.62
RaraP11416 Gm23805-201ENSMUST00000180129 107 ntBASIC4.94□□□□□ -1.62
RaraP11416 Gm23512-201ENSMUST00000180237 107 ntBASIC4.94□□□□□ -1.62
RaraP11416 Gm25327-201ENSMUST00000180263 107 ntBASIC4.94□□□□□ -1.62
RaraP11416 Gm26058-201ENSMUST00000180294 107 ntBASIC4.94□□□□□ -1.62
Retrieved 100 of 76,532 protein–RNA pairs in 108 ms